RNA–Protein interactions for RNA: ENST00000600387.5

ARHGEF1-221, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 2,272 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-221ENST00000600387 GHRHP01286 108 aa12.9□□□□□ -0.34
ARHGEF1-221ENST00000600387 COX17Q14061 63 aa12.9□□□□□ -0.34
ARHGEF1-221ENST00000600387 UBL5Q9BZL1 73 aa12.9□□□□□ -0.35
ARHGEF1-221ENST00000600387 NDUFC2-KCTD14E9PQ53 114 aa12.89□□□□□ -0.35
ARHGEF1-221ENST00000600387 HILS1P60008 231 aa12.89□□□□□ -0.35
ARHGEF1-221ENST00000600387 PLA2G2AP14555 144 aa12.88□□□□□ -0.35
ARHGEF1-221ENST00000600387 WFDC10AQ9H1F0 79 aa12.88□□□□□ -0.35
ARHGEF1-221ENST00000600387 DSCR8Q96T75 97 aa12.88□□□□□ -0.35
ARHGEF1-221ENST00000600387 USP9XQ93008 2570 aaPredicted RBP12.88□□□□□ -0.35
ARHGEF1-221ENST00000600387 PRR3P79522 188 aaKnown RBP12.87□□□□□ -0.35
ARHGEF1-221ENST00000600387 ENHOQ6UWT2 76 aa12.87□□□□□ -0.35
ARHGEF1-221ENST00000600387 C19orf73Q9NVV2 129 aa12.87□□□□□ -0.35
ARHGEF1-221ENST00000600387 TRAV23DV6A0A075B6W5 121 aa12.86□□□□□ -0.35
ARHGEF1-221ENST00000600387 FLNCQ14315 2725 aa12.86□□□□□ -0.35
ARHGEF1-221ENST00000600387 WFDC9Q8NEX5 89 aa12.86□□□□□ -0.35
ARHGEF1-221ENST00000600387 FAM19A1Q7Z5A9 133 aa12.85□□□□□ -0.35
ARHGEF1-221ENST00000600387 UTP20O75691 2785 aaKnown RBP12.84□□□□□ -0.35
ARHGEF1-221ENST00000600387 GYPEP15421 78 aa12.84□□□□□ -0.35
ARHGEF1-221ENST00000600387 AKAP9Q99996 3911 aa12.83□□□□□ -0.36
ARHGEF1-221ENST00000600387 OXTP01178 125 aa12.83□□□□□ -0.36
ARHGEF1-221ENST00000600387 IGLV1-51P01701 117 aa12.83□□□□□ -0.36
ARHGEF1-221ENST00000600387 KIAA0087Q14695 138 aa12.83□□□□□ -0.36
ARHGEF1-221ENST00000600387 TEX15Q9BXT5 2789 aa12.82□□□□□ -0.36
ARHGEF1-221ENST00000600387 DNAJC9-AS1A6NH13 148 aa12.82□□□□□ -0.36
ARHGEF1-221ENST00000600387 CFAP46Q8IYW2 2715 aa12.82□□□□□ -0.36
ARHGEF1-221ENST00000600387 IGHV4-28A0A0C4DH34 117 aa12.82□□□□□ -0.36
ARHGEF1-221ENST00000600387 BCE1O60756 84 aa12.82□□□□□ -0.36
ARHGEF1-221ENST00000600387 DEFB130BP0DP73 79 aa12.82□□□□□ -0.36
ARHGEF1-221ENST00000600387 DEFB130AP0DP74 79 aa12.82□□□□□ -0.36
ARHGEF1-221ENST00000600387 C6orf99Q4VX62 202 aa12.82□□□□□ -0.36
ARHGEF1-221ENST00000600387 CLPSL2Q6UWE3 100 aa12.82□□□□□ -0.36
ARHGEF1-221ENST00000600387 LINC00575Q6W349 94 aa12.81□□□□□ -0.36
ARHGEF1-221ENST00000600387 RBM3P98179 157 aaKnown RBP12.81□□□□□ -0.36
ARHGEF1-221ENST00000600387 DEFB113Q30KQ7 82 aa12.81□□□□□ -0.36
ARHGEF1-221ENST00000600387 CD164L2Q6UWJ8 174 aa12.81□□□□□ -0.36
ARHGEF1-221ENST00000600387 LINC00612Q8N6U2 182 aa12.81□□□□□ -0.36
ARHGEF1-221ENST00000600387 PKD1L2Q7Z442 2459 aa12.8□□□□□ -0.36
ARHGEF1-221ENST00000600387 Q6ZQT0 140 aa12.8□□□□□ -0.36
ARHGEF1-221ENST00000600387 LOC110117498A0A087WWA1 95 aa12.79□□□□□ -0.36
ARHGEF1-221ENST00000600387 RNASE1P07998 156 aaKnown RBP12.79□□□□□ -0.36
ARHGEF1-221ENST00000600387 TLN2Q9Y4G6 2542 aa12.79□□□□□ -0.36
ARHGEF1-221ENST00000600387 ZNF561-AS1K7EIQ3 104 aa12.79□□□□□ -0.36
ARHGEF1-221ENST00000600387 POLQO75417 2590 aa12.79□□□□□ -0.36
ARHGEF1-221ENST00000600387 FBN2P35556 2912 aa12.78□□□□□ -0.36
ARHGEF1-221ENST00000600387 WIPF1O43516 503 aa12.77□□□□□ -0.37
ARHGEF1-221ENST00000600387 C20orf197Q8N268 126 aa12.77□□□□□ -0.37
ARHGEF1-221ENST00000600387 SETXQ7Z333 2677 aaKnown RBP12.77□□□□□ -0.37
ARHGEF1-221ENST00000600387 C6orf223Q8N319 242 aa12.76□□□□□ -0.37
ARHGEF1-221ENST00000600387 PRO0255Q9UI72 69 aa12.76□□□□□ -0.37
ARHGEF1-221ENST00000600387 LINC00269Q8N2A0 174 aa12.76□□□□□ -0.37
ARHGEF1-221ENST00000600387 MUC7Q8TAX7 377 aa12.76□□□□□ -0.37
ARHGEF1-221ENST00000600387 CHCHD10Q8WYQ3 142 aaPredicted RBP12.76□□□□□ -0.37
ARHGEF1-221ENST00000600387 TRAV7A0A075B6U4 112 aa12.75□□□□□ -0.37
ARHGEF1-221ENST00000600387 JMJD1CQ15652 2540 aa12.75□□□□□ -0.37
ARHGEF1-221ENST00000600387 KRTAP10-9P60411 292 aa12.74□□□□□ -0.37
ARHGEF1-221ENST00000600387 Q5XG85 94 aa12.74□□□□□ -0.37
ARHGEF1-221ENST00000600387 LAMTOR3Q9UHA4 124 aa12.74□□□□□ -0.37
ARHGEF1-221ENST00000600387 H3BQ85 93 aa12.74□□□□□ -0.37
ARHGEF1-221ENST00000600387 C9orf116Q5BN46 136 aaPredicted RBP12.74□□□□□ -0.37
ARHGEF1-221ENST00000600387 Q8NDZ9 215 aa12.73□□□□□ -0.37
ARHGEF1-221ENST00000600387 NBPF19A0A087WUL8 3843 aa12.73□□□□□ -0.37
ARHGEF1-221ENST00000600387 FAM236DA0A1B0GTK5 79 aa12.73□□□□□ -0.37
ARHGEF1-221ENST00000600387 FAM236CP0DP71 79 aa12.73□□□□□ -0.37
ARHGEF1-221ENST00000600387 ESM1Q9NQ30 184 aa12.73□□□□□ -0.37
ARHGEF1-221ENST00000600387 PDE6GP18545 87 aa12.72□□□□□ -0.37
ARHGEF1-221ENST00000600387 LINC01547P58512 204 aaPredicted RBP12.72□□□□□ -0.37
ARHGEF1-221ENST00000600387 A0A096LPF7 62 aa12.72□□□□□ -0.37
ARHGEF1-221ENST00000600387 C4orf26Q17RF5 130 aa12.72□□□□□ -0.37
ARHGEF1-221ENST00000600387 BBC3Q96PG8 261 aaPredicted RBP12.72□□□□□ -0.37
ARHGEF1-221ENST00000600387 LINC00482Q8N8I6 264 aa12.71□□□□□ -0.37
ARHGEF1-221ENST00000600387 REG3AQ06141 175 aa12.71□□□□□ -0.38
ARHGEF1-221ENST00000600387 ACACBO00763 2458 aa12.7□□□□□ -0.38
ARHGEF1-221ENST00000600387 ANGP03950 147 aaKnown RBP12.7□□□□□ -0.38
ARHGEF1-221ENST00000600387 Q6ZVQ6 151 aa12.7□□□□□ -0.38
ARHGEF1-221ENST00000600387 LINC01006Q8NI28 216 aa12.7□□□□□ -0.38
ARHGEF1-221ENST00000600387 EPG5Q9HCE0 2579 aa12.7□□□□□ -0.38
ARHGEF1-221ENST00000600387 IGLV10-54A0A075B6I4 117 aa12.69□□□□□ -0.38
ARHGEF1-221ENST00000600387 MYO18BQ8IUG5 2567 aa12.69□□□□□ -0.38
ARHGEF1-221ENST00000600387 CXCL6P80162 114 aa12.69□□□□□ -0.38
ARHGEF1-221ENST00000600387 C9orf66Q5T8R8 295 aa12.69□□□□□ -0.38
ARHGEF1-221ENST00000600387 C16orf95Q9H693 158 aa12.69□□□□□ -0.38
ARHGEF1-221ENST00000600387 LRRK2Q5S007 2527 aa12.69□□□□□ -0.38
ARHGEF1-221ENST00000600387 IGLV6-57P01721 117 aa12.68□□□□□ -0.38
ARHGEF1-221ENST00000600387 HAMPP81172 84 aa12.68□□□□□ -0.38
ARHGEF1-221ENST00000600387 H7BZZ5 65 aa12.68□□□□□ -0.38
ARHGEF1-221ENST00000600387 KLKP1Q107X0 134 aa12.67□□□□□ -0.38
ARHGEF1-221ENST00000600387 KRTAP1-3Q8IUG1 177 aa12.67□□□□□ -0.38
ARHGEF1-221ENST00000600387 IGSF10Q6WRI0 2623 aa12.67□□□□□ -0.38
ARHGEF1-221ENST00000600387 SERP1Q9Y6X1 66 aa12.67□□□□□ -0.38
ARHGEF1-221ENST00000600387 M0R2N4 97 aa12.66□□□□□ -0.38
ARHGEF1-221ENST00000600387 HRCT1Q6UXD1 115 aa12.66□□□□□ -0.38
ARHGEF1-221ENST00000600387 EPM2AB3EWF7 344 aa12.65□□□□□ -0.38
ARHGEF1-221ENST00000600387 Q6ZQY7 126 aa12.65□□□□□ -0.38
ARHGEF1-221ENST00000600387 X6R8D5 127 aa12.65□□□□□ -0.38
ARHGEF1-221ENST00000600387 NAV2Q8IVL1 2488 aa12.65□□□□□ -0.38
ARHGEF1-221ENST00000600387 FAM208BQ5VWN6 2430 aa12.65□□□□□ -0.38
ARHGEF1-221ENST00000600387 PTPN13Q12923 2485 aa12.65□□□□□ -0.39
ARHGEF1-221ENST00000600387 A0A0J9YWU9 116 aa12.64□□□□□ -0.39
ARHGEF1-221ENST00000600387 IGHV4-30-4P0DP06 118 aa12.64□□□□□ -0.39
ARHGEF1-221ENST00000600387 SPAG11BQ08648 103 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms