RNA–Protein interactions for RNA: ENST00000598717.5

LTBP4-223, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 5

Gene LTBP4, Length 811 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-223ENST00000598717 FRAS1Q86XX4 4008 aa12.58□□□□□ -0.4
LTBP4-223ENST00000598717 DNAH17Q9UFH2 4485 aa12.58□□□□□ -0.4
LTBP4-223ENST00000598717 IGKV2D-26A0A0A0MRZ7 120 aa12.57□□□□□ -0.4
LTBP4-223ENST00000598717 SLPIP03973 132 aa12.57□□□□□ -0.4
LTBP4-223ENST00000598717 TSPEAR-AS2P59090 65 aa12.57□□□□□ -0.4
LTBP4-223ENST00000598717 CNBPP62633 177 aaKnown RBP12.57□□□□□ -0.4
LTBP4-223ENST00000598717 UNQ6190/PRO20217Q6UXQ8 127 aa12.57□□□□□ -0.4
LTBP4-223ENST00000598717 NDUFA12Q9UI09 145 aa12.57□□□□□ -0.4
LTBP4-223ENST00000598717 MYMXA0A1B0GTQ4 84 aa12.56□□□□□ -0.4
LTBP4-223ENST00000598717 Q6ZRU5 148 aa12.56□□□□□ -0.4
LTBP4-223ENST00000598717 PAM16Q9Y3D7 125 aa12.56□□□□□ -0.4
LTBP4-223ENST00000598717 SMIM6P0DI80 62 aa12.55□□□□□ -0.4
LTBP4-223ENST00000598717 S100A12P80511 92 aa12.55□□□□□ -0.4
LTBP4-223ENST00000598717 SPATA45Q537H7 98 aa12.55□□□□□ -0.4
LTBP4-223ENST00000598717 C10orf25Q5T742 122 aa12.55□□□□□ -0.4
LTBP4-223ENST00000598717 IGLV5-52A0A0A0MRZ9 124 aa12.54□□□□□ -0.4
LTBP4-223ENST00000598717 TRBV30A0A0K0K1B3 111 aa12.54□□□□□ -0.4
LTBP4-223ENST00000598717 CDPF1Q6NVV7 123 aa12.54□□□□□ -0.4
LTBP4-223ENST00000598717 ZNF625Q96I27 306 aaPredicted RBP12.54□□□□□ -0.4
LTBP4-223ENST00000598717 HERV-K104P63124 156 aa12.53□□□□□ -0.4
LTBP4-223ENST00000598717 PGPEP1Q9NXJ5 209 aa12.53□□□□□ -0.4
LTBP4-223ENST00000598717 ZNF815PA8K554 130 aa12.52□□□□□ -0.41
LTBP4-223ENST00000598717 RNF151Q2KHN1 245 aa12.52□□□□□ -0.41
LTBP4-223ENST00000598717 C6orf48Q9UBA6 75 aa12.52□□□□□ -0.41
LTBP4-223ENST00000598717 FUSP35637 526 aaKnown RBP eCLIP12.51□□□□□ -0.413e-6■■■□□ 14.9
LTBP4-223ENST00000598717 KRTAP10-2P60368 255 aa12.51□□□□□ -0.41
LTBP4-223ENST00000598717 TTTY13Q9BZ97 58 aa12.51□□□□□ -0.41
LTBP4-223ENST00000598717 RYR3Q15413 4870 aa12.5□□□□□ -0.41
LTBP4-223ENST00000598717 PCP2Q8IVA1 136 aa12.5□□□□□ -0.41
LTBP4-223ENST00000598717 C9orf163Q8N9P6 203 aa12.5□□□□□ -0.41
LTBP4-223ENST00000598717 C9orf116Q5BN46 136 aaPredicted RBP12.49□□□□□ -0.41
LTBP4-223ENST00000598717 MEIG1Q5JSS6 88 aa12.49□□□□□ -0.41
LTBP4-223ENST00000598717 A0A1B0GVY2 172 aa12.48□□□□□ -0.41
LTBP4-223ENST00000598717 LINC00587B1AMM8 73 aa12.48□□□□□ -0.41
LTBP4-223ENST00000598717 PKIGQ9Y2B9 76 aa12.48□□□□□ -0.41
LTBP4-223ENST00000598717 PFN2P35080 140 aa12.47□□□□□ -0.41
LTBP4-223ENST00000598717 ERG28Q9UKR5 140 aa12.47□□□□□ -0.41
LTBP4-223ENST00000598717 FAT2Q9NYQ8 4349 aa12.46□□□□□ -0.41
LTBP4-223ENST00000598717 LOC107984640A0A0U1RRK4 108 aa12.46□□□□□ -0.41
LTBP4-223ENST00000598717 COX8AP10176 69 aa12.46□□□□□ -0.41
LTBP4-223ENST00000598717 SCGB1D4Q6XE38 83 aa12.46□□□□□ -0.41
LTBP4-223ENST00000598717 C14orf144Q96I85 54 aa12.46□□□□□ -0.41
LTBP4-223ENST00000598717 A0A0J9YXY3 114 aa12.45□□□□□ -0.42
LTBP4-223ENST00000598717 LINC00158P58513 81 aa12.45□□□□□ -0.42
LTBP4-223ENST00000598717 CIRBPQ14011 172 aaKnown RBP12.45□□□□□ -0.42
LTBP4-223ENST00000598717 COX17Q14061 63 aa12.45□□□□□ -0.42
LTBP4-223ENST00000598717 LINC01620Q4KN68 170 aa12.45□□□□□ -0.42
LTBP4-223ENST00000598717 GCSHP23434 173 aa12.44□□□□□ -0.42
LTBP4-223ENST00000598717 RPL18AQ02543 176 aaKnown RBP12.44□□□□□ -0.42
LTBP4-223ENST00000598717 BOD1L2Q8IYS8 172 aa12.44□□□□□ -0.42
LTBP4-223ENST00000598717 A0A0U1RRA0 63 aa12.43□□□□□ -0.42
LTBP4-223ENST00000598717 NDUFC2-KCTD14E9PQ53 114 aa12.43□□□□□ -0.42
LTBP4-223ENST00000598717 TLX1NBP0CAT3 122 aa12.43□□□□□ -0.42
LTBP4-223ENST00000598717 SMIM13P0DJ93 91 aa12.43□□□□□ -0.42
LTBP4-223ENST00000598717 C12orf57Q99622 126 aa12.43□□□□□ -0.42
LTBP4-223ENST00000598717 SLC25A34Q6PIV7 304 aa12.42□□□□□ -0.42
LTBP4-223ENST00000598717 DLEU1O43261 78 aa12.41□□□□□ -0.42
LTBP4-223ENST00000598717 GAGE2BQ13066 116 aa12.41□□□□□ -0.42
LTBP4-223ENST00000598717 SDIM1Q6ZPB5 146 aa12.41□□□□□ -0.42
LTBP4-223ENST00000598717 GAGE2EQ4V326 116 aa12.4□□□□□ -0.42
LTBP4-223ENST00000598717 Q6ZRP5 223 aa12.4□□□□□ -0.42
LTBP4-223ENST00000598717 GAGE2DQ9UEU5 116 aa12.4□□□□□ -0.42
LTBP4-223ENST00000598717 DNAH11Q96DT5 4516 aa12.4□□□□□ -0.42
LTBP4-223ENST00000598717 C16orf90A8MZG2 172 aa12.39□□□□□ -0.43
LTBP4-223ENST00000598717 TIMM17BO60830 172 aa12.39□□□□□ -0.43
LTBP4-223ENST00000598717 TMEM238C9JI98 176 aa12.38□□□□□ -0.43
LTBP4-223ENST00000598717 LINC00518Q8N0U6 118 aa12.38□□□□□ -0.43
LTBP4-223ENST00000598717 HECTD4Q9Y4D8 3996 aa12.37□□□□□ -0.43
LTBP4-223ENST00000598717 A0A096LNI7 61 aa12.37□□□□□ -0.43
LTBP4-223ENST00000598717 IGKV2-24A0A0C4DH68 120 aa12.37□□□□□ -0.43
LTBP4-223ENST00000598717 PTTG1IPP53801 180 aa12.37□□□□□ -0.43
LTBP4-223ENST00000598717 MIR7-3HGQ8N6C7 128 aa12.37□□□□□ -0.43
LTBP4-223ENST00000598717 TP73-AS1Q9UF72 201 aa12.37□□□□□ -0.43
LTBP4-223ENST00000598717 PKD1P98161 4303 aa12.37□□□□□ -0.43
LTBP4-223ENST00000598717 LINC00474Q9P2X8 69 aa12.36□□□□□ -0.43
LTBP4-223ENST00000598717 ADAMTSL4-AS1Q5T5F5 129 aa12.35□□□□□ -0.43
LTBP4-223ENST00000598717 DAND5Q8N907 189 aa12.35□□□□□ -0.43
LTBP4-223ENST00000598717 PRO1933Q9H354 126 aa12.35□□□□□ -0.43
LTBP4-223ENST00000598717 XAGE1AQ9HD64 81 aa12.35□□□□□ -0.43
LTBP4-223ENST00000598717 UQCR10Q9UDW1 63 aa12.35□□□□□ -0.43
LTBP4-223ENST00000598717 KRTAP10-1P60331 282 aa12.34□□□□□ -0.43
LTBP4-223ENST00000598717 DPH3Q96FX2 82 aa12.34□□□□□ -0.43
LTBP4-223ENST00000598717 LITAFQ99732 161 aa12.34□□□□□ -0.43
LTBP4-223ENST00000598717 SND1-IT1Q9HBX3 110 aa12.34□□□□□ -0.43
LTBP4-223ENST00000598717 CHTF8P0CG12 524 aa12.33□□□□□ -0.44
LTBP4-223ENST00000598717 SRSF9Q13242 221 aaKnown RBP eCLIP12.32□□□□□ -0.44
LTBP4-223ENST00000598717 MIEN1Q9BRT3 115 aa12.32□□□□□ -0.44
LTBP4-223ENST00000598717 Q6ZVH6 145 aa12.31□□□□□ -0.44
LTBP4-223ENST00000598717 SPANXDQ9BXN6 97 aa12.31□□□□□ -0.44
LTBP4-223ENST00000598717 SPANXCQ9NY87 97 aa12.31□□□□□ -0.44
LTBP4-223ENST00000598717 HIGD1BQ9P298 99 aa12.31□□□□□ -0.44
LTBP4-223ENST00000598717 TSTD3H0UI37 97 aa12.3□□□□□ -0.44
LTBP4-223ENST00000598717 NPC2P61916 151 aa12.3□□□□□ -0.44
LTBP4-223ENST00000598717 C9orf129Q5T035 196 aaKnown RBP12.3□□□□□ -0.44
LTBP4-223ENST00000598717 SPANXB1Q9NS25 103 aaPredicted RBP12.3□□□□□ -0.44
LTBP4-223ENST00000598717 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.3□□□□□ -0.44
LTBP4-223ENST00000598717 C2orf91Q6ZV80 131 aa12.29□□□□□ -0.44
LTBP4-223ENST00000598717 SPACA4Q8TDM5 124 aa12.29□□□□□ -0.44
LTBP4-223ENST00000598717 COPS9Q8WXC6 57 aa12.29□□□□□ -0.44
LTBP4-223ENST00000598717 DNAH5Q8TE73 4624 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms