RNA–Protein interactions for RNA: ENST00000598118.1

GRAMD1A-207, Transcript of GRAM domain containing 1A, humanhuman

TSL 1 (best)

Gene GRAMD1A, Length 2,277 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-207ENST00000598118 PAX4O43316 350 aa13.55□□□□□ -0.24
GRAMD1A-207ENST00000598118 RPL28P46779 137 aaKnown RBP13.55□□□□□ -0.24
GRAMD1A-207ENST00000598118 TRACP01848 142 aa13.53□□□□□ -0.24
GRAMD1A-207ENST00000598118 LYRM9A8MSI8 78 aa13.53□□□□□ -0.24
GRAMD1A-207ENST00000598118 SS18Q15532 418 aa13.53□□□□□ -0.24
GRAMD1A-207ENST00000598118 C6orf226Q5I0X4 101 aa13.53□□□□□ -0.24
GRAMD1A-207ENST00000598118 Q8N3U1 123 aa13.52□□□□□ -0.24
GRAMD1A-207ENST00000598118 C22orf24Q9Y442 160 aa13.52□□□□□ -0.24
GRAMD1A-207ENST00000598118 IGHV4-28A0A0C4DH34 117 aa13.51□□□□□ -0.25
GRAMD1A-207ENST00000598118 SNCGO76070 127 aa13.51□□□□□ -0.25
GRAMD1A-207ENST00000598118 C15orf53Q8NAA6 179 aa13.51□□□□□ -0.25
GRAMD1A-207ENST00000598118 SMIM11BQ8TCY0 68 aa13.51□□□□□ -0.25
GRAMD1A-207ENST00000598118 ATRQ13535 2644 aa13.5□□□□□ -0.25
GRAMD1A-207ENST00000598118 BAALC-AS2P0C853 105 aa13.5□□□□□ -0.25
GRAMD1A-207ENST00000598118 LINC00269Q8N2A0 174 aa13.5□□□□□ -0.25
GRAMD1A-207ENST00000598118 Q9HAA7 133 aa13.5□□□□□ -0.25
GRAMD1A-207ENST00000598118 CELA1Q9UNI1 258 aa13.5□□□□□ -0.25
GRAMD1A-207ENST00000598118 FAM240AA0A1B0GVK7 77 aa13.48□□□□□ -0.25
GRAMD1A-207ENST00000598118 Q8IZM0 81 aa13.48□□□□□ -0.25
GRAMD1A-207ENST00000598118 TTC32Q5I0X7 151 aa13.47□□□□□ -0.25
GRAMD1A-207ENST00000598118 APOC4P55056 127 aa13.46□□□□□ -0.25
GRAMD1A-207ENST00000598118 DAD1P61803 113 aa13.46□□□□□ -0.25
GRAMD1A-207ENST00000598118 GAGE2BQ13066 116 aa13.46□□□□□ -0.25
GRAMD1A-207ENST00000598118 GAGE2EQ4V326 116 aa13.46□□□□□ -0.25
GRAMD1A-207ENST00000598118 Q8NAQ8 132 aa13.46□□□□□ -0.25
GRAMD1A-207ENST00000598118 GAGE2DQ9UEU5 116 aa13.46□□□□□ -0.25
GRAMD1A-207ENST00000598118 TRAV26-1A0A087WT03 109 aa13.46□□□□□ -0.26
GRAMD1A-207ENST00000598118 A0A087WYN8 130 aa13.46□□□□□ -0.26
GRAMD1A-207ENST00000598118 TEP1Q99973 2627 aaKnown RBP13.46□□□□□ -0.26
GRAMD1A-207ENST00000598118 HIVEP1P15822 2718 aa13.45□□□□□ -0.26
GRAMD1A-207ENST00000598118 IGLV10-54A0A075B6I4 117 aa13.45□□□□□ -0.26
GRAMD1A-207ENST00000598118 KIAA0087Q14695 138 aa13.44□□□□□ -0.26
GRAMD1A-207ENST00000598118 ANGP03950 147 aaKnown RBP13.43□□□□□ -0.26
GRAMD1A-207ENST00000598118 CHCHD10Q8WYQ3 142 aaPredicted RBP13.43□□□□□ -0.26
GRAMD1A-207ENST00000598118 CD164L2Q6UWJ8 174 aa13.43□□□□□ -0.26
GRAMD1A-207ENST00000598118 LINC01561Q8N1V8 128 aa13.43□□□□□ -0.26
GRAMD1A-207ENST00000598118 REG3AQ06141 175 aa13.42□□□□□ -0.26
GRAMD1A-207ENST00000598118 OR13C6PQ8NH95 151 aa13.42□□□□□ -0.26
GRAMD1A-207ENST00000598118 ATP5G1P05496 136 aa13.41□□□□□ -0.26
GRAMD1A-207ENST00000598118 MALP21145 153 aa13.41□□□□□ -0.26
GRAMD1A-207ENST00000598118 NHLRC4P0CG21 123 aaPredicted RBP13.4□□□□□ -0.26
GRAMD1A-207ENST00000598118 Q6Q795 121 aa13.4□□□□□ -0.26
GRAMD1A-207ENST00000598118 ANAPC13Q9BS18 74 aa13.4□□□□□ -0.26
GRAMD1A-207ENST00000598118 MIFP14174 115 aa13.39□□□□□ -0.27
GRAMD1A-207ENST00000598118 HTN3P15516 51 aa13.39□□□□□ -0.27
GRAMD1A-207ENST00000598118 MRPL23Q16540 153 aaKnown RBP13.39□□□□□ -0.27
GRAMD1A-207ENST00000598118 PRR3P79522 188 aaKnown RBP13.39□□□□□ -0.27
GRAMD1A-207ENST00000598118 H0YGX0 51 aa13.38□□□□□ -0.27
GRAMD1A-207ENST00000598118 C9orf116Q5BN46 136 aaPredicted RBP13.38□□□□□ -0.27
GRAMD1A-207ENST00000598118 C9orf129Q5T035 196 aaKnown RBP13.38□□□□□ -0.27
GRAMD1A-207ENST00000598118 IGHV4-30-4P0DP06 118 aa13.37□□□□□ -0.27
GRAMD1A-207ENST00000598118 NDUFV3P56181 108 aaKnown RBP13.37□□□□□ -0.27
GRAMD1A-207ENST00000598118 SMCR5Q8TEV8 140 aa13.37□□□□□ -0.27
GRAMD1A-207ENST00000598118 LECT2O14960 151 aa13.36□□□□□ -0.27
GRAMD1A-207ENST00000598118 DNAL4O96015 105 aa13.36□□□□□ -0.27
GRAMD1A-207ENST00000598118 SPART-AS1P0CW21 52 aa13.36□□□□□ -0.27
GRAMD1A-207ENST00000598118 ACYP1P07311 99 aa13.36□□□□□ -0.27
GRAMD1A-207ENST00000598118 CFAP161Q6P656 301 aa13.36□□□□□ -0.27
GRAMD1A-207ENST00000598118 WFDC9Q8NEX5 89 aa13.36□□□□□ -0.27
GRAMD1A-207ENST00000598118 NANOS2P60321 138 aaKnown RBP13.34□□□□□ -0.27
GRAMD1A-207ENST00000598118 BAHCC1Q9P281 2608 aa13.33□□□□□ -0.28
GRAMD1A-207ENST00000598118 SLPIP03973 132 aa13.32□□□□□ -0.28
GRAMD1A-207ENST00000598118 CXCL5P42830 114 aa13.32□□□□□ -0.28
GRAMD1A-207ENST00000598118 LELP1Q5T871 98 aa13.32□□□□□ -0.28
GRAMD1A-207ENST00000598118 Q8NDZ9 215 aa13.32□□□□□ -0.28
GRAMD1A-207ENST00000598118 COX17Q14061 63 aa13.32□□□□□ -0.28
GRAMD1A-207ENST00000598118 INAFM2P0DMQ5 153 aa13.31□□□□□ -0.28
GRAMD1A-207ENST00000598118 C6orf223Q8N319 242 aa13.31□□□□□ -0.28
GRAMD1A-207ENST00000598118 TRBV7-7A0A0K0K1E9 115 aa13.3□□□□□ -0.28
GRAMD1A-207ENST00000598118 WIPF1O43516 503 aa13.3□□□□□ -0.28
GRAMD1A-207ENST00000598118 C10orf25Q5T742 122 aa13.3□□□□□ -0.28
GRAMD1A-207ENST00000598118 SDIM1Q6ZPB5 146 aa13.3□□□□□ -0.28
GRAMD1A-207ENST00000598118 LINC00526Q96FQ7 95 aa13.3□□□□□ -0.28
GRAMD1A-207ENST00000598118 GAGE2AQ6NT46 116 aa13.29□□□□□ -0.28
GRAMD1A-207ENST00000598118 KLK12Q9UKR0 248 aa13.29□□□□□ -0.28
GRAMD1A-207ENST00000598118 NDUFC2O95298 119 aa13.29□□□□□ -0.28
GRAMD1A-207ENST00000598118 UNQ6190/PRO20217Q6UXQ8 127 aa13.28□□□□□ -0.28
GRAMD1A-207ENST00000598118 C14orf132Q9NPU4 83 aa13.28□□□□□ -0.28
GRAMD1A-207ENST00000598118 OBSCN-AS1Q96MR7 158 aa13.27□□□□□ -0.28
GRAMD1A-207ENST00000598118 PRR34Q9NV39 138 aa13.27□□□□□ -0.28
GRAMD1A-207ENST00000598118 KLK5Q9Y337 293 aaPredicted RBP13.27□□□□□ -0.28
GRAMD1A-207ENST00000598118 ENHOQ6UWT2 76 aa13.27□□□□□ -0.29
GRAMD1A-207ENST00000598118 SPAG11BQ08648 103 aa13.26□□□□□ -0.29
GRAMD1A-207ENST00000598118 LINC00643Q86TS7 51 aa13.25□□□□□ -0.29
GRAMD1A-207ENST00000598118 NCR3O14931 201 aa13.25□□□□□ -0.29
GRAMD1A-207ENST00000598118 LYPD5Q6UWN5 251 aa13.25□□□□□ -0.29
GRAMD1A-207ENST00000598118 OXLD1Q5BKU9 147 aa13.24□□□□□ -0.29
GRAMD1A-207ENST00000598118 TMEM126AQ9H061 195 aa13.24□□□□□ -0.29
GRAMD1A-207ENST00000598118 CYSRT1A8MQ03 144 aa13.24□□□□□ -0.29
GRAMD1A-207ENST00000598118 RETNQ9HD89 108 aa13.24□□□□□ -0.29
GRAMD1A-207ENST00000598118 ANK2Q01484 3957 aa13.23□□□□□ -0.29
GRAMD1A-207ENST00000598118 ORMDL1Q9P0S3 153 aa13.23□□□□□ -0.29
GRAMD1A-207ENST00000598118 CCDC179H3BU77 68 aa13.22□□□□□ -0.29
GRAMD1A-207ENST00000598118 LINC00167Q96N53 147 aa13.22□□□□□ -0.29
GRAMD1A-207ENST00000598118 KRTAP10-11P60412 298 aa13.21□□□□□ -0.29
GRAMD1A-207ENST00000598118 Q8N814 137 aa13.21□□□□□ -0.29
GRAMD1A-207ENST00000598118 A0A0J9YWU9 116 aa13.2□□□□□ -0.3
GRAMD1A-207ENST00000598118 IMUPQ9GZP8 106 aa13.2□□□□□ -0.3
GRAMD1A-207ENST00000598118 F8P00451 2351 aa13.19□□□□□ -0.3
GRAMD1A-207ENST00000598118 C6orf99Q4VX62 202 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms