RNA–Protein interactions for RNA: ENST00000595231.5

SNRNP70-204, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 1,673 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-204ENST00000595231 C10orf25Q5T742 122 aa14.54□□□□□ -0.08
SNRNP70-204ENST00000595231 C2orf82Q6UX34 121 aa14.54□□□□□ -0.08
SNRNP70-204ENST00000595231 UNQ6190/PRO20217Q6UXQ8 127 aa14.53□□□□□ -0.08
SNRNP70-204ENST00000595231 COX7B2Q8TF08 81 aa14.53□□□□□ -0.08
SNRNP70-204ENST00000595231 TMA7Q9Y2S6 64 aaKnown RBP14.53□□□□□ -0.08
SNRNP70-204ENST00000595231 NDUFA1O15239 70 aa14.52□□□□□ -0.09
SNRNP70-204ENST00000595231 SDIM1Q6ZPB5 146 aa14.52□□□□□ -0.09
SNRNP70-204ENST00000595231 CKS1BP61024 79 aa14.49□□□□□ -0.09
SNRNP70-204ENST00000595231 DNAH8Q96JB1 4490 aa14.49□□□□□ -0.09
SNRNP70-204ENST00000595231 C6orf48Q9UBA6 75 aa14.49□□□□□ -0.09
SNRNP70-204ENST00000595231 RNF151Q2KHN1 245 aa14.48□□□□□ -0.09
SNRNP70-204ENST00000595231 FAM30AQ9NZY2 134 aa14.47□□□□□ -0.09
SNRNP70-204ENST00000595231 CXCL5P42830 114 aa14.46□□□□□ -0.09
SNRNP70-204ENST00000595231 C20orf202A1L168 122 aa14.46□□□□□ -0.1
SNRNP70-204ENST00000595231 BIRC6Q9NR09 4857 aa14.45□□□□□ -0.1
SNRNP70-204ENST00000595231 TRBV30A0A0K0K1B3 111 aa14.45□□□□□ -0.1
SNRNP70-204ENST00000595231 Q6ZSA8 131 aa14.45□□□□□ -0.1
SNRNP70-204ENST00000595231 C9orf116Q5BN46 136 aaPredicted RBP14.43□□□□□ -0.1
SNRNP70-204ENST00000595231 APOBP04114 4563 aaKnown RBP14.43□□□□□ -0.1
SNRNP70-204ENST00000595231 STPG4Q8N801 248 aa14.42□□□□□ -0.1
SNRNP70-204ENST00000595231 PANO1I0J062 215 aa14.42□□□□□ -0.1
SNRNP70-204ENST00000595231 ZNF625Q96I27 306 aaPredicted RBP14.42□□□□□ -0.1
SNRNP70-204ENST00000595231 LEPROTO15243 131 aa14.41□□□□□ -0.1
SNRNP70-204ENST00000595231 TSPEAR-AS2P59090 65 aa14.41□□□□□ -0.1
SNRNP70-204ENST00000595231 HERVK_113P61574 105 aa14.41□□□□□ -0.1
SNRNP70-204ENST00000595231 ATOH7Q8N100 152 aa14.41□□□□□ -0.1
SNRNP70-204ENST00000595231 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.41□□□□□ -0.1
SNRNP70-204ENST00000595231 LOC107984640A0A0U1RRK4 108 aa14.4□□□□□ -0.1
SNRNP70-204ENST00000595231 A0A096LNI7 61 aa14.39□□□□□ -0.11
SNRNP70-204ENST00000595231 E9PLD3 99 aa14.39□□□□□ -0.11
SNRNP70-204ENST00000595231 TLX1NBP0CAT3 122 aa14.39□□□□□ -0.11
SNRNP70-204ENST00000595231 CHTF8P0CG12 524 aa14.39□□□□□ -0.11
SNRNP70-204ENST00000595231 AKR1D1P51857 326 aa14.38□□□□□ -0.11
SNRNP70-204ENST00000595231 CIRBPQ14011 172 aaKnown RBP14.38□□□□□ -0.11
SNRNP70-204ENST00000595231 Q6ZRP5 223 aa14.38□□□□□ -0.11
SNRNP70-204ENST00000595231 PLEKHB2Q96CS7 222 aa14.38□□□□□ -0.11
SNRNP70-204ENST00000595231 KIAA1109Q2LD37 5005 aa14.37□□□□□ -0.11
SNRNP70-204ENST00000595231 J3QQQ9 107 aa14.37□□□□□ -0.11
SNRNP70-204ENST00000595231 XGP55808 180 aa14.37□□□□□ -0.11
SNRNP70-204ENST00000595231 PKIGQ9Y2B9 76 aa14.37□□□□□ -0.11
SNRNP70-204ENST00000595231 IGKV2-24A0A0C4DH68 120 aa14.36□□□□□ -0.11
SNRNP70-204ENST00000595231 NDUFC2-KCTD14E9PQ53 114 aa14.36□□□□□ -0.11
SNRNP70-204ENST00000595231 PTTG1IPP53801 180 aa14.36□□□□□ -0.11
SNRNP70-204ENST00000595231 RPL18AQ02543 176 aaKnown RBP14.36□□□□□ -0.11
SNRNP70-204ENST00000595231 SFTA2Q6UW10 78 aa14.36□□□□□ -0.11
SNRNP70-204ENST00000595231 CDK2AP2O75956 126 aa14.35□□□□□ -0.11
SNRNP70-204ENST00000595231 GAGE2BQ13066 116 aa14.35□□□□□ -0.11
SNRNP70-204ENST00000595231 SPACA4Q8TDM5 124 aa14.35□□□□□ -0.11
SNRNP70-204ENST00000595231 NDUFA12Q9UI09 145 aa14.35□□□□□ -0.11
SNRNP70-204ENST00000595231 IGKV2D-26A0A0A0MRZ7 120 aa14.34□□□□□ -0.11
SNRNP70-204ENST00000595231 HAMPP81172 84 aa14.34□□□□□ -0.11
SNRNP70-204ENST00000595231 SCGB1D1O95968 90 aa14.33□□□□□ -0.11
SNRNP70-204ENST00000595231 RYR1P21817 5038 aa14.33□□□□□ -0.12
SNRNP70-204ENST00000595231 LGALS3P17931 250 aaKnown RBP14.32□□□□□ -0.12
SNRNP70-204ENST00000595231 MAJINQ3KP22 176 aa14.32□□□□□ -0.12
SNRNP70-204ENST00000595231 ANKRD39Q53RE8 183 aa14.32□□□□□ -0.12
SNRNP70-204ENST00000595231 SCXQ7RTU7 201 aa14.32□□□□□ -0.12
SNRNP70-204ENST00000595231 HSPG2P98160 4391 aa14.31□□□□□ -0.12
SNRNP70-204ENST00000595231 CIRBP-AS1Q8TBR5 109 aa14.31□□□□□ -0.12
SNRNP70-204ENST00000595231 LINC00474Q9P2X8 69 aa14.31□□□□□ -0.12
SNRNP70-204ENST00000595231 ERG28Q9UKR5 140 aa14.31□□□□□ -0.12
SNRNP70-204ENST00000595231 MYMXA0A1B0GTQ4 84 aa14.3□□□□□ -0.12
SNRNP70-204ENST00000595231 GAGE2EQ4V326 116 aa14.3□□□□□ -0.12
SNRNP70-204ENST00000595231 GAGE2DQ9UEU5 116 aa14.3□□□□□ -0.12
SNRNP70-204ENST00000595231 NMUP48645 174 aa14.3□□□□□ -0.12
SNRNP70-204ENST00000595231 HERV-K104P63124 156 aa14.3□□□□□ -0.12
SNRNP70-204ENST00000595231 PFN2P35080 140 aa14.29□□□□□ -0.12
SNRNP70-204ENST00000595231 JOSD1Q15040 202 aaPredicted RBP14.29□□□□□ -0.12
SNRNP70-204ENST00000595231 DPH3Q96FX2 82 aa14.29□□□□□ -0.12
SNRNP70-204ENST00000595231 A0A087WYN8 130 aa14.28□□□□□ -0.12
SNRNP70-204ENST00000595231 COX17Q14061 63 aa14.28□□□□□ -0.12
SNRNP70-204ENST00000595231 C9orf129Q5T035 196 aaKnown RBP14.26□□□□□ -0.13
SNRNP70-204ENST00000595231 TTTY13Q9BZ97 58 aa14.26□□□□□ -0.13
SNRNP70-204ENST00000595231 PLAC8Q9NZF1 115 aa14.26□□□□□ -0.13
SNRNP70-204ENST00000595231 XAGE1AQ9HD64 81 aa14.25□□□□□ -0.13
SNRNP70-204ENST00000595231 A0A1W2PNN7 141 aa14.24□□□□□ -0.13
SNRNP70-204ENST00000595231 EPM2AB3EWF7 344 aa14.23□□□□□ -0.13
SNRNP70-204ENST00000595231 SMIM13P0DJ93 91 aa14.23□□□□□ -0.13
SNRNP70-204ENST00000595231 A0A0U1RRA0 63 aa14.23□□□□□ -0.13
SNRNP70-204ENST00000595231 MEIG1Q5JSS6 88 aa14.23□□□□□ -0.13
SNRNP70-204ENST00000595231 FAM168BA1KXE4 195 aa14.22□□□□□ -0.13
SNRNP70-204ENST00000595231 LINC00158P58513 81 aa14.22□□□□□ -0.13
SNRNP70-204ENST00000595231 PYY3Q5JQD4 70 aa14.22□□□□□ -0.13
SNRNP70-204ENST00000595231 A0A0J9YXY3 114 aa14.21□□□□□ -0.13
SNRNP70-204ENST00000595231 HSBP1L1C9JCN9 74 aa14.21□□□□□ -0.13
SNRNP70-204ENST00000595231 KRTAP7-1Q8IUC3 87 aa14.21□□□□□ -0.13
SNRNP70-204ENST00000595231 ZNF815PA8K554 130 aa14.2□□□□□ -0.14
SNRNP70-204ENST00000595231 LINC00587B1AMM8 73 aa14.2□□□□□ -0.14
SNRNP70-204ENST00000595231 PCP2Q8IVA1 136 aa14.2□□□□□ -0.14
SNRNP70-204ENST00000595231 SND1-IT1Q9HBX3 110 aa14.2□□□□□ -0.14
SNRNP70-204ENST00000595231 KRTAP17-1Q9BYP8 105 aa14.18□□□□□ -0.14
SNRNP70-204ENST00000595231 SMR3BP02814 79 aaPredicted RBP14.17□□□□□ -0.14
SNRNP70-204ENST00000595231 MIR7-3HGQ8N6C7 128 aa14.17□□□□□ -0.14
SNRNP70-204ENST00000595231 LOC105371267A0A1B0GV96 52 aa14.16□□□□□ -0.14
SNRNP70-204ENST00000595231 SERTAD4-AS1Q5TG53 156 aa14.16□□□□□ -0.14
SNRNP70-204ENST00000595231 ADAMTSL4-AS1Q5T5F5 129 aa14.15□□□□□ -0.14
SNRNP70-204ENST00000595231 DAND5Q8N907 189 aa14.15□□□□□ -0.14
SNRNP70-204ENST00000595231 LITAFQ99732 161 aa14.15□□□□□ -0.14
SNRNP70-204ENST00000595231 FAT1Q14517 4588 aa14.15□□□□□ -0.14
SNRNP70-204ENST00000595231 FAM19A5Q7Z5A7 132 aaPredicted RBP14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms