RNA–Protein interactions for RNA: ENST00000593048.5

CIRBP-241, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 650 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-241ENST00000593048 C2orf88Q9BSF0 95 aa10.36□□□□□ -0.75
CIRBP-241ENST00000593048 HMCN2Q8NDA2 5059 aa10.36□□□□□ -0.75
CIRBP-241ENST00000593048 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.35□□□□□ -0.75
CIRBP-241ENST00000593048 IGKV2-29A2NJV5 120 aaPredicted RBP10.35□□□□□ -0.75
CIRBP-241ENST00000593048 HERVK_113P61574 105 aa10.35□□□□□ -0.75
CIRBP-241ENST00000593048 C11orf86A6NJI1 115 aa10.34□□□□□ -0.75
CIRBP-241ENST00000593048 PANO1I0J062 215 aa10.34□□□□□ -0.75
CIRBP-241ENST00000593048 ZC2HC1BQ5TFG8 222 aa10.34□□□□□ -0.75
CIRBP-241ENST00000593048 LINC00587B1AMM8 73 aa10.33□□□□□ -0.76
CIRBP-241ENST00000593048 MAJINQ3KP22 176 aa10.33□□□□□ -0.76
CIRBP-241ENST00000593048 FAM19A3Q7Z5A8 133 aa10.33□□□□□ -0.76
CIRBP-241ENST00000593048 BOD1L2Q8IYS8 172 aa10.33□□□□□ -0.76
CIRBP-241ENST00000593048 TMEM101Q96IK0 257 aa10.33□□□□□ -0.76
CIRBP-241ENST00000593048 LRP1Q07954 4544 aaKnown RBP10.33□□□□□ -0.76
CIRBP-241ENST00000593048 SLPIP03973 132 aa10.32□□□□□ -0.76
CIRBP-241ENST00000593048 FGF6P10767 208 aa10.32□□□□□ -0.76
CIRBP-241ENST00000593048 HNRNPA3P51991 378 aaKnown RBP10.32□□□□□ -0.76
CIRBP-241ENST00000593048 CHCHD10Q8WYQ3 142 aaPredicted RBP10.32□□□□□ -0.76
CIRBP-241ENST00000593048 IGLV4-69A0A075B6H9 119 aa10.31□□□□□ -0.76
CIRBP-241ENST00000593048 TINCRA0A1B0GVN0 87 aa10.31□□□□□ -0.76
CIRBP-241ENST00000593048 E9PLD3 99 aa10.31□□□□□ -0.76
CIRBP-241ENST00000593048 HIGD2BQ4VC39 106 aa10.31□□□□□ -0.76
CIRBP-241ENST00000593048 SERTAD4-AS1Q5TG53 156 aa10.31□□□□□ -0.76
CIRBP-241ENST00000593048 C14orf144Q96I85 54 aa10.31□□□□□ -0.76
CIRBP-241ENST00000593048 CCL25O15444 150 aa10.3□□□□□ -0.76
CIRBP-241ENST00000593048 CHTF8P0CG12 524 aa10.3□□□□□ -0.76
CIRBP-241ENST00000593048 CIRBPQ14011 172 aaKnown RBP10.3□□□□□ -0.76
CIRBP-241ENST00000593048 ANKRD39Q53RE8 183 aa10.3□□□□□ -0.76
CIRBP-241ENST00000593048 STPG4Q8N801 248 aa10.3□□□□□ -0.76
CIRBP-241ENST00000593048 C15orf56Q8N910 161 aa10.3□□□□□ -0.76
CIRBP-241ENST00000593048 OR5A1Q8NGJ0 315 aa10.3□□□□□ -0.76
CIRBP-241ENST00000593048 UBR4Q5T4S7 5183 aa10.29□□□□□ -0.76
CIRBP-241ENST00000593048 A0A087WYN8 130 aa10.29□□□□□ -0.76
CIRBP-241ENST00000593048 M0R143 59 aa10.29□□□□□ -0.76
CIRBP-241ENST00000593048 HIGD1BQ9P298 99 aa10.29□□□□□ -0.76
CIRBP-241ENST00000593048 COX6A2Q02221 97 aa10.28□□□□□ -0.76
CIRBP-241ENST00000593048 FAM104AQ969W3 186 aa10.28□□□□□ -0.76
CIRBP-241ENST00000593048 CDC42SE2Q9NRR3 84 aa10.28□□□□□ -0.76
CIRBP-241ENST00000593048 FAT3Q8TDW7 4589 aa10.28□□□□□ -0.76
CIRBP-241ENST00000593048 HERVK_113P63121 156 aa10.27□□□□□ -0.77
CIRBP-241ENST00000593048 SPACA4Q8TDM5 124 aa10.27□□□□□ -0.77
CIRBP-241ENST00000593048 PKHD1L1Q86WI1 4243 aa10.27□□□□□ -0.77
CIRBP-241ENST00000593048 IGLV5-45A0A087WSX0 123 aa10.26□□□□□ -0.77
CIRBP-241ENST00000593048 H3BRM9 83 aa10.26□□□□□ -0.77
CIRBP-241ENST00000593048 XCL1P47992 114 aa10.26□□□□□ -0.77
CIRBP-241ENST00000593048 NMUP48645 174 aa10.26□□□□□ -0.77
CIRBP-241ENST00000593048 UBE2D1P51668 147 aa10.26□□□□□ -0.77
CIRBP-241ENST00000593048 IGKV2-24A0A0C4DH68 120 aa10.25□□□□□ -0.77
CIRBP-241ENST00000593048 C7orf33Q8WU49 177 aa10.25□□□□□ -0.77
CIRBP-241ENST00000593048 PLEKHB2Q96CS7 222 aa10.25□□□□□ -0.77
CIRBP-241ENST00000593048 GVQW2A0A096LPI5 108 aaPredicted RBP10.24□□□□□ -0.77
CIRBP-241ENST00000593048 LINC00959A0A1B0GUT2 108 aa10.24□□□□□ -0.77
CIRBP-241ENST00000593048 TMEM223A0PJW6 202 aa10.24□□□□□ -0.77
CIRBP-241ENST00000593048 CTAG1AP78358 180 aa10.24□□□□□ -0.77
CIRBP-241ENST00000593048 FOXI1Q12951 378 aa10.24□□□□□ -0.77
CIRBP-241ENST00000593048 SS18Q15532 418 aa10.24□□□□□ -0.77
CIRBP-241ENST00000593048 TMEM170BQ5T4T1 132 aa10.24□□□□□ -0.77
CIRBP-241ENST00000593048 Q6ZUT4 128 aa10.24□□□□□ -0.77
CIRBP-241ENST00000593048 OPRPNQ99935 248 aaPredicted RBP10.24□□□□□ -0.77
CIRBP-241ENST00000593048 GEMIN7Q9H840 131 aaKnown RBP10.24□□□□□ -0.77
CIRBP-241ENST00000593048 ZNF22P17026 224 aaPredicted RBP10.23□□□□□ -0.77
CIRBP-241ENST00000593048 TAL2Q16559 108 aa10.23□□□□□ -0.77
CIRBP-241ENST00000593048 Q6ZRU5 148 aa10.23□□□□□ -0.77
CIRBP-241ENST00000593048 PLAC8Q9NZF1 115 aa10.23□□□□□ -0.77
CIRBP-241ENST00000593048 IGHV1-58A0A0C4DH39 117 aa10.22□□□□□ -0.77
CIRBP-241ENST00000593048 A0A0J9YXV3 536 aa10.22□□□□□ -0.77
CIRBP-241ENST00000593048 LEPROTO15243 131 aa10.22□□□□□ -0.77
CIRBP-241ENST00000593048 IGKV2D-26A0A0A0MRZ7 120 aa10.21□□□□□ -0.77
CIRBP-241ENST00000593048 MYMXA0A1B0GTQ4 84 aa10.21□□□□□ -0.77
CIRBP-241ENST00000593048 PLA2G2DQ9UNK4 145 aa10.21□□□□□ -0.77
CIRBP-241ENST00000593048 ZNF561-AS1K7EIQ3 104 aa10.2□□□□□ -0.78
CIRBP-241ENST00000593048 HSD52Q0P140 79 aa10.2□□□□□ -0.78
CIRBP-241ENST00000593048 PCP2Q8IVA1 136 aa10.2□□□□□ -0.78
CIRBP-241ENST00000593048 PKIGQ9Y2B9 76 aa10.2□□□□□ -0.78
CIRBP-241ENST00000593048 J3QQQ9 107 aa10.19□□□□□ -0.78
CIRBP-241ENST00000593048 CD164L2Q6UWJ8 174 aa10.19□□□□□ -0.78
CIRBP-241ENST00000593048 C2orf91Q6ZV80 131 aa10.19□□□□□ -0.78
CIRBP-241ENST00000593048 LINC01561Q8N1V8 128 aa10.19□□□□□ -0.78
CIRBP-241ENST00000593048 LINC00526Q96FQ7 95 aa10.19□□□□□ -0.78
CIRBP-241ENST00000593048 SNHG12Q9BXW3 62 aa10.19□□□□□ -0.78
CIRBP-241ENST00000593048 LINC00474Q9P2X8 69 aa10.19□□□□□ -0.78
CIRBP-241ENST00000593048 A0A096LNI7 61 aa10.18□□□□□ -0.78
CIRBP-241ENST00000593048 LGALS3P17931 250 aaKnown RBP10.18□□□□□ -0.78
CIRBP-241ENST00000593048 COL5A1-AS1Q5SY13 56 aa10.18□□□□□ -0.78
CIRBP-241ENST00000593048 LINC00242Q5T6M2 205 aa10.18□□□□□ -0.78
CIRBP-241ENST00000593048 CARD19Q96LW7 228 aa10.18□□□□□ -0.78
CIRBP-241ENST00000593048 MALP21145 153 aa10.17□□□□□ -0.78
CIRBP-241ENST00000593048 LINC00469Q8N7U9 141 aa10.17□□□□□ -0.78
CIRBP-241ENST00000593048 ZNF815PA8K554 130 aa10.16□□□□□ -0.78
CIRBP-241ENST00000593048 SYCNQ0VAF6 134 aa10.16□□□□□ -0.78
CIRBP-241ENST00000593048 SFTA2Q6UW10 78 aa10.16□□□□□ -0.78
CIRBP-241ENST00000593048 IGLV5-39A0A0G2JS06 123 aa10.15□□□□□ -0.78
CIRBP-241ENST00000593048 TRAV13-1A0A0B4J241 112 aa10.14□□□□□ -0.79
CIRBP-241ENST00000593048 COX7A2LO14548 114 aa10.14□□□□□ -0.79
CIRBP-241ENST00000593048 RNASE13Q5GAN3 156 aaKnown RBP10.14□□□□□ -0.79
CIRBP-241ENST00000593048 SPANXB1Q9NS25 103 aaPredicted RBP10.14□□□□□ -0.79
CIRBP-241ENST00000593048 A6NDN8 102 aa10.13□□□□□ -0.79
CIRBP-241ENST00000593048 BVES-AS1Q5T3Y7 98 aa10.13□□□□□ -0.79
CIRBP-241ENST00000593048 SCGB1D4Q6XE38 83 aa10.13□□□□□ -0.79
CIRBP-241ENST00000593048 Q6ZVH6 145 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms