RNA–Protein interactions for RNA: ENST00000592012.5

MBD3-209, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 2,379 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-209ENST00000592012 EGFEM1PQ0D2K5 195 aa13.52□□□□□ -0.24
MBD3-209ENST00000592012 C6orf226Q5I0X4 101 aa13.52□□□□□ -0.24
MBD3-209ENST00000592012 C3orf56Q8N813 242 aa13.52□□□□□ -0.24
MBD3-209ENST00000592012 ANGP03950 147 aaKnown RBP13.52□□□□□ -0.25
MBD3-209ENST00000592012 LINC00158P58513 81 aa13.52□□□□□ -0.25
MBD3-209ENST00000592012 LINC01561Q8N1V8 128 aa13.52□□□□□ -0.25
MBD3-209ENST00000592012 ANKRD29Q8N6D5 301 aa13.51□□□□□ -0.25
MBD3-209ENST00000592012 CLEC2BQ92478 149 aa13.51□□□□□ -0.25
MBD3-209ENST00000592012 REG3AQ06141 175 aa13.51□□□□□ -0.25
MBD3-209ENST00000592012 CD164L2Q6UWJ8 174 aa13.51□□□□□ -0.25
MBD3-209ENST00000592012 PPDPFLQ8WWR9 84 aa13.51□□□□□ -0.25
MBD3-209ENST00000592012 LELP1Q5T871 98 aa13.5□□□□□ -0.25
MBD3-209ENST00000592012 Q8IZM0 81 aa13.5□□□□□ -0.25
MBD3-209ENST00000592012 CHCHD10Q8WYQ3 142 aaPredicted RBP13.5□□□□□ -0.25
MBD3-209ENST00000592012 LINC01600Q96MT4 127 aa13.5□□□□□ -0.25
MBD3-209ENST00000592012 DNAH3Q8TD57 4116 aa13.49□□□□□ -0.25
MBD3-209ENST00000592012 LST1O00453 97 aa13.49□□□□□ -0.25
MBD3-209ENST00000592012 RETNQ9HD89 108 aa13.49□□□□□ -0.25
MBD3-209ENST00000592012 TRBV10-2A0A0K0K1G8 114 aa13.49□□□□□ -0.25
MBD3-209ENST00000592012 GAGE12HA6NDE8 117 aa13.48□□□□□ -0.25
MBD3-209ENST00000592012 PFN2P35080 140 aa13.48□□□□□ -0.25
MBD3-209ENST00000592012 C11orf68Q9H3H3 251 aaKnown RBP13.48□□□□□ -0.25
MBD3-209ENST00000592012 IGLV10-54A0A075B6I4 117 aa13.47□□□□□ -0.25
MBD3-209ENST00000592012 SND1-IT1Q9HBX3 110 aa13.47□□□□□ -0.25
MBD3-209ENST00000592012 COX7A2LO14548 114 aa13.46□□□□□ -0.25
MBD3-209ENST00000592012 CCL18P55774 89 aa13.46□□□□□ -0.25
MBD3-209ENST00000592012 SPATA25Q9BR10 227 aa13.46□□□□□ -0.25
MBD3-209ENST00000592012 IGKV2-28A0A075B6P5 120 aa13.46□□□□□ -0.25
MBD3-209ENST00000592012 IGKV2D-28P01615 120 aa13.46□□□□□ -0.25
MBD3-209ENST00000592012 C2orf82Q6UX34 121 aa13.45□□□□□ -0.26
MBD3-209ENST00000592012 TRAV13-2A0A0B4J235 113 aa13.45□□□□□ -0.26
MBD3-209ENST00000592012 KIAA0087Q14695 138 aa13.45□□□□□ -0.26
MBD3-209ENST00000592012 LINC00337Q8N6G1 96 aa13.45□□□□□ -0.26
MBD3-209ENST00000592012 LYPD5Q6UWN5 251 aa13.44□□□□□ -0.26
MBD3-209ENST00000592012 TENM3Q9P273 2699 aa13.42□□□□□ -0.26
MBD3-209ENST00000592012 CRPP02741 224 aa13.42□□□□□ -0.26
MBD3-209ENST00000592012 CKS1BP61024 79 aa13.42□□□□□ -0.26
MBD3-209ENST00000592012 NTN5Q8WTR8 489 aaPredicted RBP13.42□□□□□ -0.26
MBD3-209ENST00000592012 COL6A5A8TX70 2615 aa13.41□□□□□ -0.26
MBD3-209ENST00000592012 MALP21145 153 aa13.41□□□□□ -0.26
MBD3-209ENST00000592012 C21orf62-AS1Q17RA5 79 aa13.41□□□□□ -0.26
MBD3-209ENST00000592012 PRR34Q9NV39 138 aa13.41□□□□□ -0.26
MBD3-209ENST00000592012 H3BT86 120 aa13.4□□□□□ -0.26
MBD3-209ENST00000592012 H3BNG1 76 aa13.4□□□□□ -0.26
MBD3-209ENST00000592012 SIGMAR1Q99720 223 aa13.4□□□□□ -0.26
MBD3-209ENST00000592012 RPL28P46779 137 aaKnown RBP13.39□□□□□ -0.27
MBD3-209ENST00000592012 Q6ZTC4 211 aa13.39□□□□□ -0.27
MBD3-209ENST00000592012 KLK12Q9UKR0 248 aa13.39□□□□□ -0.27
MBD3-209ENST00000592012 NOTCH1P46531 2555 aa13.39□□□□□ -0.27
MBD3-209ENST00000592012 KPRPQ5T749 579 aaPredicted RBP13.38□□□□□ -0.27
MBD3-209ENST00000592012 CDIP1Q9H305 208 aa13.38□□□□□ -0.27
MBD3-209ENST00000592012 TEX49A0A1B0GTD5 131 aa13.38□□□□□ -0.27
MBD3-209ENST00000592012 CXCL5P42830 114 aa13.38□□□□□ -0.27
MBD3-209ENST00000592012 CFAP161Q6P656 301 aa13.38□□□□□ -0.27
MBD3-209ENST00000592012 ENHOQ6UWT2 76 aa13.37□□□□□ -0.27
MBD3-209ENST00000592012 KLK5Q9Y337 293 aaPredicted RBP13.36□□□□□ -0.27
MBD3-209ENST00000592012 COX17Q14061 63 aa13.35□□□□□ -0.27
MBD3-209ENST00000592012 SMIM11BQ8TCY0 68 aa13.35□□□□□ -0.27
MBD3-209ENST00000592012 FAM218AQ96MZ4 157 aa13.35□□□□□ -0.27
MBD3-209ENST00000592012 UBE2WQ96B02 151 aa13.34□□□□□ -0.27
MBD3-209ENST00000592012 A0A0J9YWU9 116 aa13.34□□□□□ -0.27
MBD3-209ENST00000592012 TRACP01848 142 aa13.33□□□□□ -0.28
MBD3-209ENST00000592012 C9orf116Q5BN46 136 aaPredicted RBP13.32□□□□□ -0.28
MBD3-209ENST00000592012 WFDC10BQ8IUB3 73 aa13.32□□□□□ -0.28
MBD3-209ENST00000592012 NBEAL1Q6ZS30 2694 aa13.31□□□□□ -0.28
MBD3-209ENST00000592012 TRAV8-4A0A0B4J246 113 aa13.3□□□□□ -0.28
MBD3-209ENST00000592012 NANOS2P60321 138 aaKnown RBP13.3□□□□□ -0.28
MBD3-209ENST00000592012 C6orf223Q8N319 242 aa13.3□□□□□ -0.28
MBD3-209ENST00000592012 SPAG11BQ08648 103 aa13.3□□□□□ -0.28
MBD3-209ENST00000592012 C10orf25Q5T742 122 aa13.29□□□□□ -0.28
MBD3-209ENST00000592012 OR13C6PQ8NH95 151 aa13.29□□□□□ -0.28
MBD3-209ENST00000592012 ESRGQ1W209 222 aa13.28□□□□□ -0.28
MBD3-209ENST00000592012 UNQ6190/PRO20217Q6UXQ8 127 aa13.28□□□□□ -0.28
MBD3-209ENST00000592012 C11orf45Q8TAV5 145 aa13.28□□□□□ -0.28
MBD3-209ENST00000592012 LINC00526Q96FQ7 95 aa13.28□□□□□ -0.28
MBD3-209ENST00000592012 DEFB131BA0A096LNP1 70 aa13.27□□□□□ -0.29
MBD3-209ENST00000592012 NDUFC2O95298 119 aa13.27□□□□□ -0.29
MBD3-209ENST00000592012 PRR3P79522 188 aaKnown RBP13.27□□□□□ -0.29
MBD3-209ENST00000592012 DEFB121Q5J5C9 76 aa13.27□□□□□ -0.29
MBD3-209ENST00000592012 H0YGX0 51 aa13.25□□□□□ -0.29
MBD3-209ENST00000592012 XGP55808 180 aa13.25□□□□□ -0.29
MBD3-209ENST00000592012 BAALC-AS2P0C853 105 aa13.25□□□□□ -0.29
MBD3-209ENST00000592012 A0A087WYN8 130 aa13.23□□□□□ -0.29
MBD3-209ENST00000592012 Q9HAA7 133 aa13.23□□□□□ -0.29
MBD3-209ENST00000592012 MT-ATP8P03928 68 aa13.23□□□□□ -0.29
MBD3-209ENST00000592012 SCGB1A1P11684 91 aa13.23□□□□□ -0.29
MBD3-209ENST00000592012 C22orf24Q9Y442 160 aa13.23□□□□□ -0.29
MBD3-209ENST00000592012 PRB2P02812 416 aaPredicted RBP13.22□□□□□ -0.29
MBD3-209ENST00000592012 KRTAP26-1Q6PEX3 210 aa13.22□□□□□ -0.29
MBD3-209ENST00000592012 Q8NDZ9 215 aa13.22□□□□□ -0.29
MBD3-209ENST00000592012 HUWE1Q7Z6Z7 4374 aaKnown RBP13.21□□□□□ -0.29
MBD3-209ENST00000592012 MUC7Q8TAX7 377 aa13.21□□□□□ -0.29
MBD3-209ENST00000592012 GVQW2A0A096LPI5 108 aaPredicted RBP13.2□□□□□ -0.3
MBD3-209ENST00000592012 TMEM126AQ9H061 195 aa13.19□□□□□ -0.3
MBD3-209ENST00000592012 DNAL4O96015 105 aa13.17□□□□□ -0.3
MBD3-209ENST00000592012 LINC01556Q5JQF7 62 aa13.17□□□□□ -0.3
MBD3-209ENST00000592012 C6orf48Q9UBA6 75 aa13.17□□□□□ -0.3
MBD3-209ENST00000592012 TM2D3Q9BRN9 247 aa13.17□□□□□ -0.3
MBD3-209ENST00000592012 MGAM2Q2M2H8 2515 aa13.16□□□□□ -0.3
MBD3-209ENST00000592012 K7EIL1 84 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms