RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 PKIAP61925 76 aa4.8□□□□□ -1.64
VMP1-213ENST00000591877 RNASEKQ6P5S7 137 aaKnown RBP4.8□□□□□ -1.64
VMP1-213ENST00000591877 HIST3H2BBQ8N257 126 aa4.8□□□□□ -1.64
VMP1-213ENST00000591877 IGLV10-54A0A075B6I4 117 aa4.79□□□□□ -1.64
VMP1-213ENST00000591877 TRAV26-2A0A0B4J265 109 aa4.79□□□□□ -1.64
VMP1-213ENST00000591877 REG3AQ06141 175 aa4.79□□□□□ -1.64
VMP1-213ENST00000591877 PRR4Q16378 134 aa4.79□□□□□ -1.64
VMP1-213ENST00000591877 C14orf177Q52M58 125 aa4.79□□□□□ -1.64
VMP1-213ENST00000591877 TMEM243Q9BU79 118 aa4.79□□□□□ -1.64
VMP1-213ENST00000591877 PANO1I0J062 215 aa4.78□□□□□ -1.64
VMP1-213ENST00000591877 ESDP10768 282 aa4.78□□□□□ -1.64
VMP1-213ENST00000591877 S100A2P29034 98 aa4.78□□□□□ -1.64
VMP1-213ENST00000591877 C9orf163Q8N9P6 203 aa4.78□□□□□ -1.64
VMP1-213ENST00000591877 RPL39LQ96EH5 51 aaKnown RBP4.78□□□□□ -1.64
VMP1-213ENST00000591877 TMEM191AQ9H0A3 160 aa4.78□□□□□ -1.64
VMP1-213ENST00000591877 AKR1D1P51857 326 aa4.77□□□□□ -1.65
VMP1-213ENST00000591877 COTL1Q14019 142 aa4.77□□□□□ -1.65
VMP1-213ENST00000591877 HIGD2BQ4VC39 106 aa4.77□□□□□ -1.65
VMP1-213ENST00000591877 FAM104BQ5XKR9 115 aa4.77□□□□□ -1.65
VMP1-213ENST00000591877 SDIM1Q6ZPB5 146 aa4.77□□□□□ -1.65
VMP1-213ENST00000591877 BAGE3Q86Y29 109 aa4.77□□□□□ -1.65
VMP1-213ENST00000591877 KRTAP7-1Q8IUC3 87 aa4.77□□□□□ -1.65
VMP1-213ENST00000591877 C18orf32Q8TCD1 76 aa4.77□□□□□ -1.65
VMP1-213ENST00000591877 PACRGQ96M98 296 aaPredicted RBP4.77□□□□□ -1.65
VMP1-213ENST00000591877 TRAV8-4A0A0B4J246 113 aa4.76□□□□□ -1.65
VMP1-213ENST00000591877 PPBPP02775 128 aa4.76□□□□□ -1.65
VMP1-213ENST00000591877 SMIM6P0DI80 62 aa4.76□□□□□ -1.65
VMP1-213ENST00000591877 CXCL6P80162 114 aa4.76□□□□□ -1.65
VMP1-213ENST00000591877 PDZD11Q5EBL8 140 aa4.76□□□□□ -1.65
VMP1-213ENST00000591877 SMIM15Q7Z3B0 74 aa4.76□□□□□ -1.65
VMP1-213ENST00000591877 HIST1H2BLQ99880 126 aa4.76□□□□□ -1.65
VMP1-213ENST00000591877 CSDC2Q9Y534 153 aaKnown RBP4.76□□□□□ -1.65
VMP1-213ENST00000591877 LRP1Q07954 4544 aaKnown RBP4.76□□□□□ -1.65
VMP1-213ENST00000591877 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.75□□□□□ -1.65
VMP1-213ENST00000591877 TRBV6-5A0A0K0K1A5 114 aa4.75□□□□□ -1.65
VMP1-213ENST00000591877 IGKV2-29A2NJV5 120 aaPredicted RBP4.75□□□□□ -1.65
VMP1-213ENST00000591877 SDHAF1A6NFY7 115 aa4.75□□□□□ -1.65
VMP1-213ENST00000591877 UBE2L6O14933 153 aa4.75□□□□□ -1.65
VMP1-213ENST00000591877 SERF1AO75920 110 aa4.75□□□□□ -1.65
VMP1-213ENST00000591877 FABP4P15090 132 aa4.75□□□□□ -1.65
VMP1-213ENST00000591877 CNBPP62633 177 aaKnown RBP4.75□□□□□ -1.65
VMP1-213ENST00000591877 Q1RN00 199 aa4.75□□□□□ -1.65
VMP1-213ENST00000591877 AMN1Q8IY45 258 aa4.75□□□□□ -1.65
VMP1-213ENST00000591877 ORMDL3Q8N138 153 aa4.75□□□□□ -1.65
VMP1-213ENST00000591877 C15orf56Q8N910 161 aa4.75□□□□□ -1.65
VMP1-213ENST00000591877 RNF185Q96GF1 192 aa4.75□□□□□ -1.65
VMP1-213ENST00000591877 LAMTOR2Q9Y2Q5 125 aa4.75□□□□□ -1.65
VMP1-213ENST00000591877 IGKV3OR2-268A0A0C4DH90 116 aa4.74□□□□□ -1.65
VMP1-213ENST00000591877 NCR2O95944 276 aa4.74□□□□□ -1.65
VMP1-213ENST00000591877 CIRBPQ14011 172 aaKnown RBP4.74□□□□□ -1.65
VMP1-213ENST00000591877 MRPL51Q4U2R6 128 aaKnown RBP4.74□□□□□ -1.65
VMP1-213ENST00000591877 OR10D4PQ8NGN7 298 aa4.74□□□□□ -1.65
VMP1-213ENST00000591877 CHCHD1Q96BP2 118 aaKnown RBP4.74□□□□□ -1.65
VMP1-213ENST00000591877 D6R8Y8 96 aa4.73□□□□□ -1.65
VMP1-213ENST00000591877 I3L3M4 83 aa4.73□□□□□ -1.65
VMP1-213ENST00000591877 NUPR1O60356 82 aa4.73□□□□□ -1.65
VMP1-213ENST00000591877 HSBP1O75506 76 aa4.73□□□□□ -1.65
VMP1-213ENST00000591877 CHTF8P0CG12 524 aa4.73□□□□□ -1.65
VMP1-213ENST00000591877 FGF6P10767 208 aa4.73□□□□□ -1.65
VMP1-213ENST00000591877 RAB4AP20338 218 aa4.73□□□□□ -1.65
VMP1-213ENST00000591877 PMCHP20382 165 aa4.73□□□□□ -1.65
VMP1-213ENST00000591877 CKS2P33552 79 aa4.73□□□□□ -1.65
VMP1-213ENST00000591877 POLR2KP53803 58 aaKnown RBP4.73□□□□□ -1.65
VMP1-213ENST00000591877 MRAP2Q96G30 205 aa4.73□□□□□ -1.65
VMP1-213ENST00000591877 PRELID3AQ96N28 172 aa4.73□□□□□ -1.65
VMP1-213ENST00000591877 KIR2DL4Q99706 377 aa4.73□□□□□ -1.65
VMP1-213ENST00000591877 IGLV8-61A0A075B6I0 122 aa4.72□□□□□ -1.65
VMP1-213ENST00000591877 SMKR1H3BMG3 65 aa4.72□□□□□ -1.65
VMP1-213ENST00000591877 RPL37AP61513 92 aaKnown RBP4.72□□□□□ -1.65
VMP1-213ENST00000591877 PYY3Q5JQD4 70 aa4.72□□□□□ -1.65
VMP1-213ENST00000591877 AMMECR1LQ6DCA0 310 aa4.72□□□□□ -1.65
VMP1-213ENST00000591877 CHCHD10Q8WYQ3 142 aaPredicted RBP4.72□□□□□ -1.65
VMP1-213ENST00000591877 C12orf57Q99622 126 aa4.72□□□□□ -1.65
VMP1-213ENST00000591877 FAT3Q8TDW7 4589 aa4.72□□□□□ -1.65
VMP1-213ENST00000591877 PKHD1L1Q86WI1 4243 aa4.71□□□□□ -1.66
VMP1-213ENST00000591877 IGHV3-64A0A075B6Q5 118 aa4.71□□□□□ -1.66
VMP1-213ENST00000591877 TRBV27A0A0K0K1C4 114 aa4.71□□□□□ -1.66
VMP1-213ENST00000591877 PPP1R17O96001 155 aa4.71□□□□□ -1.66
VMP1-213ENST00000591877 NPYP01303 97 aa4.71□□□□□ -1.66
VMP1-213ENST00000591877 LINC00614P0C842 121 aa4.71□□□□□ -1.66
VMP1-213ENST00000591877 ZNF25P17030 456 aaPredicted RBP4.71□□□□□ -1.66
VMP1-213ENST00000591877 JOSD1Q15040 202 aaPredicted RBP4.71□□□□□ -1.66
VMP1-213ENST00000591877 FA2HQ7L5A8 372 aa4.71□□□□□ -1.66
VMP1-213ENST00000591877 OR5A1Q8NGJ0 315 aa4.71□□□□□ -1.66
VMP1-213ENST00000591877 SPACA4Q8TDM5 124 aa4.71□□□□□ -1.66
VMP1-213ENST00000591877 MAP1LC3AQ9H492 121 aa4.71□□□□□ -1.66
VMP1-213ENST00000591877 ST20Q9HBF5 79 aa4.71□□□□□ -1.66
VMP1-213ENST00000591877 GVQW2A0A096LPI5 108 aaPredicted RBP4.7□□□□□ -1.66
VMP1-213ENST00000591877 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.7□□□□□ -1.66
VMP1-213ENST00000591877 LINC00959A0A1B0GUT2 108 aa4.7□□□□□ -1.66
VMP1-213ENST00000591877 LINC01546A6NGU7 62 aa4.7□□□□□ -1.66
VMP1-213ENST00000591877 CCL25O15444 150 aa4.7□□□□□ -1.66
VMP1-213ENST00000591877 MRPL52Q86TS9 123 aaKnown RBP4.7□□□□□ -1.66
VMP1-213ENST00000591877 HIST1H4GQ99525 98 aa4.7□□□□□ -1.66
VMP1-213ENST00000591877 NXT2Q9NPJ8 142 aaKnown RBP4.7□□□□□ -1.66
VMP1-213ENST00000591877 CDC42SE2Q9NRR3 84 aa4.7□□□□□ -1.66
VMP1-213ENST00000591877 OXTP01178 125 aa4.69□□□□□ -1.66
VMP1-213ENST00000591877 IFI27P40305 119 aaPredicted RBP4.69□□□□□ -1.66
VMP1-213ENST00000591877 XCL1P47992 114 aa4.69□□□□□ -1.66
VMP1-213ENST00000591877 COX6A2Q02221 97 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 112.7 ms