RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 Q8IZM0 81 aa13.6□□□□□ -0.23
ATG4D-212ENST00000590096 SPACA4Q8TDM5 124 aa13.6□□□□□ -0.23
ATG4D-212ENST00000590096 LINC00474Q9P2X8 69 aa13.6□□□□□ -0.23
ATG4D-212ENST00000590096 CHTOPQ9Y3Y2 248 aaKnown RBP13.6□□□□□ -0.23
ATG4D-212ENST00000590096 TRAV12-1A0A0B4J245 112 aa13.59□□□□□ -0.23
ATG4D-212ENST00000590096 SMIM1B2RUZ4 78 aa13.59□□□□□ -0.23
ATG4D-212ENST00000590096 CKS1BP61024 79 aa13.59□□□□□ -0.23
ATG4D-212ENST00000590096 A0A096LNI7 61 aa13.58□□□□□ -0.24
ATG4D-212ENST00000590096 SPINK8P0C7L1 97 aa13.58□□□□□ -0.24
ATG4D-212ENST00000590096 MAJINQ3KP22 176 aa13.58□□□□□ -0.24
ATG4D-212ENST00000590096 C10orf25Q5T742 122 aa13.58□□□□□ -0.24
ATG4D-212ENST00000590096 C2orf82Q6UX34 121 aa13.58□□□□□ -0.24
ATG4D-212ENST00000590096 HSPB8Q9UJY1 196 aa13.58□□□□□ -0.24
ATG4D-212ENST00000590096 EPM2AB3EWF7 344 aa13.57□□□□□ -0.24
ATG4D-212ENST00000590096 FAM229AH3BQW9 127 aa13.57□□□□□ -0.24
ATG4D-212ENST00000590096 TRBV30A0A0K0K1B3 111 aa13.56□□□□□ -0.24
ATG4D-212ENST00000590096 ZNF22P17026 224 aaPredicted RBP13.56□□□□□ -0.24
ATG4D-212ENST00000590096 RPL18AQ02543 176 aaKnown RBP13.56□□□□□ -0.24
ATG4D-212ENST00000590096 GAGE2BQ13066 116 aa13.56□□□□□ -0.24
ATG4D-212ENST00000590096 C6orf48Q9UBA6 75 aa13.56□□□□□ -0.24
ATG4D-212ENST00000590096 FAT1Q14517 4588 aa13.55□□□□□ -0.24
ATG4D-212ENST00000590096 A0A087WYN8 130 aa13.55□□□□□ -0.24
ATG4D-212ENST00000590096 C11orf86A6NJI1 115 aa13.55□□□□□ -0.24
ATG4D-212ENST00000590096 H0Y8G0 127 aa13.55□□□□□ -0.24
ATG4D-212ENST00000590096 FABP4P15090 132 aa13.55□□□□□ -0.24
ATG4D-212ENST00000590096 CXCL5P42830 114 aa13.55□□□□□ -0.24
ATG4D-212ENST00000590096 PTTG1IPP53801 180 aa13.55□□□□□ -0.24
ATG4D-212ENST00000590096 Q5VSD8 79 aa13.55□□□□□ -0.24
ATG4D-212ENST00000590096 COX7B2Q8TF08 81 aa13.55□□□□□ -0.24
ATG4D-212ENST00000590096 TMEM170BQ5T4T1 132 aa13.54□□□□□ -0.24
ATG4D-212ENST00000590096 LINC00528Q8N1L1 170 aa13.54□□□□□ -0.24
ATG4D-212ENST00000590096 F8VRH5 84 aa13.53□□□□□ -0.24
ATG4D-212ENST00000590096 STPG4Q8N801 248 aa13.53□□□□□ -0.24
ATG4D-212ENST00000590096 PLAC8Q9NZF1 115 aa13.52□□□□□ -0.25
ATG4D-212ENST00000590096 TLX1NBP0CAT3 122 aa13.51□□□□□ -0.25
ATG4D-212ENST00000590096 IGLV5-39A0A0G2JS06 123 aa13.49□□□□□ -0.25
ATG4D-212ENST00000590096 ODF1Q14990 250 aa13.49□□□□□ -0.25
ATG4D-212ENST00000590096 PLA2G1BP04054 148 aaKnown RBP13.48□□□□□ -0.25
ATG4D-212ENST00000590096 C9orf116Q5BN46 136 aaPredicted RBP13.48□□□□□ -0.25
ATG4D-212ENST00000590096 MAP1LC3CQ9BXW4 147 aa13.48□□□□□ -0.25
ATG4D-212ENST00000590096 NDUFC2-KCTD14E9PQ53 114 aa13.47□□□□□ -0.25
ATG4D-212ENST00000590096 GAGE2EQ4V326 116 aa13.47□□□□□ -0.25
ATG4D-212ENST00000590096 COA6Q5JTJ3 125 aaKnown RBP13.47□□□□□ -0.25
ATG4D-212ENST00000590096 Q6ZRP5 223 aa13.47□□□□□ -0.25
ATG4D-212ENST00000590096 GAGE2DQ9UEU5 116 aa13.47□□□□□ -0.25
ATG4D-212ENST00000590096 TMEM223A0PJW6 202 aa13.44□□□□□ -0.26
ATG4D-212ENST00000590096 PLNP26678 52 aa13.44□□□□□ -0.26
ATG4D-212ENST00000590096 VPS13BQ7Z7G8 4022 aa13.43□□□□□ -0.26
ATG4D-212ENST00000590096 C7orf33Q8WU49 177 aa13.43□□□□□ -0.26
ATG4D-212ENST00000590096 DPM2O94777 84 aa13.41□□□□□ -0.26
ATG4D-212ENST00000590096 RPL37AP61513 92 aaKnown RBP13.41□□□□□ -0.26
ATG4D-212ENST00000590096 A0A1W2PNN7 141 aa13.4□□□□□ -0.26
ATG4D-212ENST00000590096 SFTA2Q6UW10 78 aa13.4□□□□□ -0.26
ATG4D-212ENST00000590096 PMCHL2Q9BQD1 86 aa13.4□□□□□ -0.26
ATG4D-212ENST00000590096 HERC1Q15751 4861 aa13.4□□□□□ -0.26
ATG4D-212ENST00000590096 SYS1-DBNDD2H3BUS1 97 aa13.39□□□□□ -0.27
ATG4D-212ENST00000590096 IGKCP01834 107 aa13.39□□□□□ -0.27
ATG4D-212ENST00000590096 INAFM2P0DMQ5 153 aa13.36□□□□□ -0.27
ATG4D-212ENST00000590096 HERVK_113P61574 105 aa13.36□□□□□ -0.27
ATG4D-212ENST00000590096 FAM168BA1KXE4 195 aa13.35□□□□□ -0.27
ATG4D-212ENST00000590096 C9orf129Q5T035 196 aaKnown RBP13.35□□□□□ -0.27
ATG4D-212ENST00000590096 PET117Q6UWS5 81 aa13.35□□□□□ -0.27
ATG4D-212ENST00000590096 FAM19A5Q7Z5A7 132 aaPredicted RBP13.35□□□□□ -0.27
ATG4D-212ENST00000590096 SRRM2Q9UQ35 2752 aaKnown RBP13.34□□□□□ -0.27
ATG4D-212ENST00000590096 ZNF625Q96I27 306 aaPredicted RBP13.34□□□□□ -0.27
ATG4D-212ENST00000590096 XAGE1AQ9HD64 81 aa13.34□□□□□ -0.27
ATG4D-212ENST00000590096 ERG28Q9UKR5 140 aa13.34□□□□□ -0.27
ATG4D-212ENST00000590096 C3orf79P0CE67 100 aa13.33□□□□□ -0.28
ATG4D-212ENST00000590096 PFN2P35080 140 aa13.33□□□□□ -0.28
ATG4D-212ENST00000590096 LEPROTO15243 131 aa13.32□□□□□ -0.28
ATG4D-212ENST00000590096 S100A6P06703 90 aa13.32□□□□□ -0.28
ATG4D-212ENST00000590096 KRTAP10-4P60372 401 aaPredicted RBP13.32□□□□□ -0.28
ATG4D-212ENST00000590096 KRTDAPP60985 99 aa13.32□□□□□ -0.28
ATG4D-212ENST00000590096 COX17Q14061 63 aa13.32□□□□□ -0.28
ATG4D-212ENST00000590096 LINC01545Q5VT33 79 aa13.32□□□□□ -0.28
ATG4D-212ENST00000590096 PLEKHB2Q96CS7 222 aa13.32□□□□□ -0.28
ATG4D-212ENST00000590096 PHF5AQ7RTV0 110 aaKnown RBP13.31□□□□□ -0.28
ATG4D-212ENST00000590096 DMBT1Q9UGM3 2413 aaPredicted RBP13.3□□□□□ -0.28
ATG4D-212ENST00000590096 NDUFA12Q9UI09 145 aa13.3□□□□□ -0.28
ATG4D-212ENST00000590096 M0QXV9 152 aa13.29□□□□□ -0.28
ATG4D-212ENST00000590096 S100A2P29034 98 aa13.29□□□□□ -0.28
ATG4D-212ENST00000590096 MYMXA0A1B0GTQ4 84 aa13.28□□□□□ -0.28
ATG4D-212ENST00000590096 HERV-K104P63124 156 aa13.28□□□□□ -0.28
ATG4D-212ENST00000590096 C20orf202A1L168 122 aa13.27□□□□□ -0.29
ATG4D-212ENST00000590096 J3QQQ9 107 aa13.27□□□□□ -0.29
ATG4D-212ENST00000590096 PRR3P79522 188 aaKnown RBP13.27□□□□□ -0.29
ATG4D-212ENST00000590096 HIST3H2BBQ8N257 126 aa13.27□□□□□ -0.29
ATG4D-212ENST00000590096 LGALS3P17931 250 aaKnown RBP13.26□□□□□ -0.29
ATG4D-212ENST00000590096 LINC00158P58513 81 aa13.26□□□□□ -0.29
ATG4D-212ENST00000590096 TSPEAR-AS2P59090 65 aa13.26□□□□□ -0.29
ATG4D-212ENST00000590096 MEIG1Q5JSS6 88 aa13.26□□□□□ -0.29
ATG4D-212ENST00000590096 SERTAD4-AS1Q5TG53 156 aa13.26□□□□□ -0.29
ATG4D-212ENST00000590096 KRTAP7-1Q8IUC3 87 aa13.26□□□□□ -0.29
ATG4D-212ENST00000590096 LINC00587B1AMM8 73 aa13.24□□□□□ -0.29
ATG4D-212ENST00000590096 E9PLD3 99 aa13.23□□□□□ -0.29
ATG4D-212ENST00000590096 NMUP48645 174 aa13.23□□□□□ -0.29
ATG4D-212ENST00000590096 UBE2BP63146 152 aa13.23□□□□□ -0.29
ATG4D-212ENST00000590096 SND1-IT1Q9HBX3 110 aa13.23□□□□□ -0.29
ATG4D-212ENST00000590096 PLA2G2DQ9UNK4 145 aa13.23□□□□□ -0.29
ATG4D-212ENST00000590096 C22orf24Q9Y442 160 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms