RNA–Protein interactions for RNA: ENST00000589710.5

CIRBP-225, Transcript of cold inducible RNA binding protein, human

TSL 2 BASIC

Gene CIRBP, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-225	ENST00000589710		A0A1W2PPM0	123 aa		13.76	□□□□□ -0.21
CIRBP-225	ENST00000589710		Q8IZM0	81 aa		13.76	□□□□□ -0.21
CIRBP-225	ENST00000589710	PGPEP1	Q9NXJ5	209 aa		13.76	□□□□□ -0.21
CIRBP-225	ENST00000589710	GTF2H5	Q6ZYL4	71 aa		13.76	□□□□□ -0.21
CIRBP-225	ENST00000589710	LINC01556	Q5JQF7	62 aa		13.75	□□□□□ -0.21
CIRBP-225	ENST00000589710	CFAP161	Q6P656	301 aa		13.75	□□□□□ -0.21
CIRBP-225	ENST00000589710	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	13.74	□□□□□ -0.21
CIRBP-225	ENST00000589710	FABP2	P12104	132 aa		13.74	□□□□□ -0.21
CIRBP-225	ENST00000589710	IFITM1	P13164	125 aa		13.74	□□□□□ -0.21
CIRBP-225	ENST00000589710	LINC00588	Q9Y4M8	146 aa		13.74	□□□□□ -0.21
CIRBP-225	ENST00000589710	TRAV8-4	A0A0B4J246	113 aa		13.74	□□□□□ -0.21
CIRBP-225	ENST00000589710	CCL18	P55774	89 aa		13.74	□□□□□ -0.21
CIRBP-225	ENST00000589710	C2orf82	Q6UX34	121 aa		13.74	□□□□□ -0.21
CIRBP-225	ENST00000589710	GAGE10	A6NGK3	116 aa		13.73	□□□□□ -0.21
CIRBP-225	ENST00000589710	EIF4EBP3	O60516	100 aa	Predicted RBP	13.73	□□□□□ -0.21
CIRBP-225	ENST00000589710	CKS1B	P61024	79 aa		13.73	□□□□□ -0.21
CIRBP-225	ENST00000589710	SFTA2	Q6UW10	78 aa		13.73	□□□□□ -0.21
CIRBP-225	ENST00000589710	LINC00308	Q8TCZ7	52 aa		13.73	□□□□□ -0.21
CIRBP-225	ENST00000589710	LINC00158	P58513	81 aa		13.72	□□□□□ -0.21
CIRBP-225	ENST00000589710	PRO1854	Q9UHT4	67 aa		13.71	□□□□□ -0.21
CIRBP-225	ENST00000589710		A0A0B4J2C4	111 aa		13.71	□□□□□ -0.22
CIRBP-225	ENST00000589710		K7EP34	96 aa		13.71	□□□□□ -0.22
CIRBP-225	ENST00000589710	TSPAN13	O95857	204 aa		13.71	□□□□□ -0.22
CIRBP-225	ENST00000589710	PFN2	P35080	140 aa		13.71	□□□□□ -0.22
CIRBP-225	ENST00000589710	COPS9	Q8WXC6	57 aa		13.7	□□□□□ -0.22
CIRBP-225	ENST00000589710	SPCS1	Q9Y6A9	102 aa		13.7	□□□□□ -0.22
CIRBP-225	ENST00000589710	TG	P01266	2768 aa		13.69	□□□□□ -0.22
CIRBP-225	ENST00000589710	DNAH10OS	P0CZ25	163 aa		13.69	□□□□□ -0.22
CIRBP-225	ENST00000589710	SPAG11B	Q08648	103 aa		13.69	□□□□□ -0.22
CIRBP-225	ENST00000589710	KIAA0087	Q14695	138 aa		13.69	□□□□□ -0.22
CIRBP-225	ENST00000589710	MIR7-3HG	Q8N6C7	128 aa		13.69	□□□□□ -0.22
CIRBP-225	ENST00000589710	IBA57-AS1	B1ANH7	110 aa		13.69	□□□□□ -0.22
CIRBP-225	ENST00000589710		H7C2G1	150 aa		13.69	□□□□□ -0.22
CIRBP-225	ENST00000589710	ERG28	Q9UKR5	140 aa		13.69	□□□□□ -0.22
CIRBP-225	ENST00000589710	SOSTDC1	Q6X4U4	206 aa		13.68	□□□□□ -0.22
CIRBP-225	ENST00000589710	CXCL5	P42830	114 aa		13.67	□□□□□ -0.22
CIRBP-225	ENST00000589710	C1orf43	Q9BWL3	253 aa		13.67	□□□□□ -0.22
CIRBP-225	ENST00000589710		Q1RN00	199 aa		13.67	□□□□□ -0.22
CIRBP-225	ENST00000589710		Q9HAA7	133 aa		13.67	□□□□□ -0.22
CIRBP-225	ENST00000589710	KLK5	Q9Y337	293 aa	Predicted RBP	13.67	□□□□□ -0.22
CIRBP-225	ENST00000589710	IGKV2D-24	A0A075B6R9	120 aa		13.66	□□□□□ -0.22
CIRBP-225	ENST00000589710	LINC00526	Q96FQ7	95 aa		13.66	□□□□□ -0.22
CIRBP-225	ENST00000589710	LOC107984156	A0A0G2JMH3	177 aa		13.65	□□□□□ -0.22
CIRBP-225	ENST00000589710	ARL17A	Q8IVW1	177 aa		13.65	□□□□□ -0.22
CIRBP-225	ENST00000589710	C6orf223	Q8N319	242 aa		13.64	□□□□□ -0.23
CIRBP-225	ENST00000589710	KRTAP26-1	Q6PEX3	210 aa		13.62	□□□□□ -0.23
CIRBP-225	ENST00000589710	PSMB2	P49721	201 aa		13.61	□□□□□ -0.23
CIRBP-225	ENST00000589710	HIGD2B	Q4VC39	106 aa		13.61	□□□□□ -0.23
CIRBP-225	ENST00000589710	RPL13A	P40429	203 aa	Known RBP	13.6	□□□□□ -0.23
CIRBP-225	ENST00000589710	C9orf116	Q5BN46	136 aa	Predicted RBP	13.6	□□□□□ -0.23
CIRBP-225	ENST00000589710	UNQ6190/PRO20217	Q6UXQ8	127 aa		13.6	□□□□□ -0.23
CIRBP-225	ENST00000589710	UPK3B	Q9BT76	320 aa		13.6	□□□□□ -0.23
CIRBP-225	ENST00000589710	UBE2DNL	Q8IWF7	75 aa		13.6	□□□□□ -0.23
CIRBP-225	ENST00000589710	C10orf25	Q5T742	122 aa		13.59	□□□□□ -0.23
CIRBP-225	ENST00000589710	SCGB1C2	P0DMR2	95 aa		13.58	□□□□□ -0.24
CIRBP-225	ENST00000589710	LYRM7	Q5U5X0	104 aa		13.58	□□□□□ -0.24
CIRBP-225	ENST00000589710	SND1-IT1	Q9HBX3	110 aa		13.58	□□□□□ -0.24
CIRBP-225	ENST00000589710	APLN	Q9ULZ1	77 aa		13.58	□□□□□ -0.24
CIRBP-225	ENST00000589710	ZNF561-AS1	K7EIQ3	104 aa		13.57	□□□□□ -0.24
CIRBP-225	ENST00000589710	PPDPF	Q9H3Y8	114 aa		13.57	□□□□□ -0.24
CIRBP-225	ENST00000589710	NUPR2	A6NF83	97 aa		13.56	□□□□□ -0.24
CIRBP-225	ENST00000589710	COX17	Q14061	63 aa		13.55	□□□□□ -0.24
CIRBP-225	ENST00000589710	C15orf56	Q8N910	161 aa		13.55	□□□□□ -0.24
CIRBP-225	ENST00000589710	NTN5	Q8WTR8	489 aa	Predicted RBP	13.55	□□□□□ -0.24
CIRBP-225	ENST00000589710	DYNC2H1	Q8NCM8	4307 aa	Known RBP	13.55	□□□□□ -0.24
CIRBP-225	ENST00000589710		H3BMG7	143 aa		13.54	□□□□□ -0.24
CIRBP-225	ENST00000589710	DNAH7	Q8WXX0	4024 aa		13.54	□□□□□ -0.24
CIRBP-225	ENST00000589710	CAMK2N2	Q96S95	79 aa		13.53	□□□□□ -0.24
CIRBP-225	ENST00000589710	LYST	Q99698	3801 aa		13.53	□□□□□ -0.24
CIRBP-225	ENST00000589710	TRIAP1	O43715	76 aa		13.53	□□□□□ -0.24
CIRBP-225	ENST00000589710	OCIAD2	Q56VL3	154 aa		13.52	□□□□□ -0.25
CIRBP-225	ENST00000589710	CSMD3	Q7Z407	3707 aa		13.52	□□□□□ -0.25
CIRBP-225	ENST00000589710	RMI2	Q96E14	147 aa		13.51	□□□□□ -0.25
CIRBP-225	ENST00000589710	C6orf48	Q9UBA6	75 aa		13.51	□□□□□ -0.25
CIRBP-225	ENST00000589710	TRBV30	A0A0K0K1B3	111 aa		13.5	□□□□□ -0.25
CIRBP-225	ENST00000589710	TCL1B	O95988	128 aa		13.5	□□□□□ -0.25
CIRBP-225	ENST00000589710	IGKV2-28	A0A075B6P5	120 aa		13.49	□□□□□ -0.25
CIRBP-225	ENST00000589710	TRAV13-2	A0A0B4J235	113 aa		13.49	□□□□□ -0.25
CIRBP-225	ENST00000589710	IGKV2D-28	P01615	120 aa		13.49	□□□□□ -0.25
CIRBP-225	ENST00000589710	GVQW2	A0A096LPI5	108 aa	Predicted RBP	13.48	□□□□□ -0.25
CIRBP-225	ENST00000589710		K7ERU9	68 aa		13.48	□□□□□ -0.25
CIRBP-225	ENST00000589710	LINC00337	Q8N6G1	96 aa		13.48	□□□□□ -0.25
CIRBP-225	ENST00000589710	MTURN	Q8N3F0	131 aa		13.48	□□□□□ -0.25
CIRBP-225	ENST00000589710	DNAH1	Q9P2D7	4330 aa		13.48	□□□□□ -0.25
CIRBP-225	ENST00000589710	TRBV20-1	A0A075B6N2	111 aa		13.47	□□□□□ -0.25
CIRBP-225	ENST00000589710		F8W1H4	67 aa		13.47	□□□□□ -0.25
CIRBP-225	ENST00000589710	COX6C	P09669	75 aa		13.47	□□□□□ -0.25
CIRBP-225	ENST00000589710	CASC10	Q5T4H9	136 aa		13.47	□□□□□ -0.25
CIRBP-225	ENST00000589710		Q6ZRU5	148 aa		13.47	□□□□□ -0.25
CIRBP-225	ENST00000589710	C2orf48	Q96LS8	159 aa		13.46	□□□□□ -0.25
CIRBP-225	ENST00000589710	WWC2-AS2	Q96NR7	200 aa		13.46	□□□□□ -0.26
CIRBP-225	ENST00000589710	KRTAP1-5	Q9BYS1	174 aa		13.45	□□□□□ -0.26
CIRBP-225	ENST00000589710	USP17L23	D6RBM5	183 aa		13.44	□□□□□ -0.26
CIRBP-225	ENST00000589710	OR13C6P	Q8NH95	151 aa		13.44	□□□□□ -0.26
CIRBP-225	ENST00000589710	STARD9	Q9P2P6	4700 aa		13.44	□□□□□ -0.26
CIRBP-225	ENST00000589710	MUC7	Q8TAX7	377 aa		13.43	□□□□□ -0.26
CIRBP-225	ENST00000589710	PLEC	Q15149	4684 aa	Known RBP	13.43	□□□□□ -0.26
CIRBP-225	ENST00000589710	LECT2	O14960	151 aa		13.42	□□□□□ -0.26
CIRBP-225	ENST00000589710	PRR3	P79522	188 aa	Known RBP	13.41	□□□□□ -0.26
CIRBP-225	ENST00000589710	SYCN	Q0VAF6	134 aa		13.41	□□□□□ -0.26

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