RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 Q1RN00 199 aa7.12□□□□□ -1.27
VPS25-203ENST00000589520 TM2D3Q9BRN9 247 aa7.12□□□□□ -1.27
VPS25-203ENST00000589520 RETNQ9HD89 108 aa7.12□□□□□ -1.27
VPS25-203ENST00000589520 DEFB131BA0A096LNP1 70 aa7.11□□□□□ -1.27
VPS25-203ENST00000589520 A0A0J9YWU9 116 aa7.11□□□□□ -1.27
VPS25-203ENST00000589520 MALP21145 153 aa7.11□□□□□ -1.27
VPS25-203ENST00000589520 CFAP161Q6P656 301 aa7.11□□□□□ -1.27
VPS25-203ENST00000589520 Q6ZTC4 211 aa7.11□□□□□ -1.27
VPS25-203ENST00000589520 C15orf53Q8NAA6 179 aa7.11□□□□□ -1.27
VPS25-203ENST00000589520 KLK5Q9Y337 293 aaPredicted RBP7.11□□□□□ -1.27
VPS25-203ENST00000589520 TRAV13-2A0A0B4J235 113 aa7.1□□□□□ -1.27
VPS25-203ENST00000589520 TRAV10A0A0B4J240 114 aa7.1□□□□□ -1.27
VPS25-203ENST00000589520 H3BMG7 143 aa7.1□□□□□ -1.27
VPS25-203ENST00000589520 CRPP02741 224 aa7.1□□□□□ -1.27
VPS25-203ENST00000589520 LINC00158P58513 81 aa7.1□□□□□ -1.27
VPS25-203ENST00000589520 CKS1BP61024 79 aa7.1□□□□□ -1.27
VPS25-203ENST00000589520 ATXN8Q156A1 80 aa7.1□□□□□ -1.27
VPS25-203ENST00000589520 J3QR89 54 aa7.09□□□□□ -1.27
VPS25-203ENST00000589520 M0QXV9 152 aa7.09□□□□□ -1.27
VPS25-203ENST00000589520 OCIAD2Q56VL3 154 aa7.09□□□□□ -1.27
VPS25-203ENST00000589520 TRRAPQ9Y4A5 3859 aa7.08□□□□□ -1.28
VPS25-203ENST00000589520 EIF4EBP3O60516 100 aaPredicted RBP7.08□□□□□ -1.28
VPS25-203ENST00000589520 FOXI1Q12951 378 aa7.08□□□□□ -1.28
VPS25-203ENST00000589520 MIR7-3HGQ8N6C7 128 aa7.08□□□□□ -1.28
VPS25-203ENST00000589520 KLK12Q9UKR0 248 aa7.08□□□□□ -1.28
VPS25-203ENST00000589520 BIRC6Q9NR09 4857 aa7.07□□□□□ -1.28
VPS25-203ENST00000589520 K7EIL1 84 aa7.07□□□□□ -1.28
VPS25-203ENST00000589520 TCL1BO95988 128 aa7.07□□□□□ -1.28
VPS25-203ENST00000589520 NANOS2P60321 138 aaKnown RBP7.07□□□□□ -1.28
VPS25-203ENST00000589520 NPC2P61916 151 aa7.07□□□□□ -1.28
VPS25-203ENST00000589520 KIAA0087Q14695 138 aa7.07□□□□□ -1.28
VPS25-203ENST00000589520 DEFB121Q5J5C9 76 aa7.07□□□□□ -1.28
VPS25-203ENST00000589520 CLPSL2Q6UWE3 100 aa7.07□□□□□ -1.28
VPS25-203ENST00000589520 DAND5Q8N907 189 aa7.07□□□□□ -1.28
VPS25-203ENST00000589520 PRO0461Q9UI25 63 aa7.07□□□□□ -1.28
VPS25-203ENST00000589520 A0A0U1RRA0 63 aa7.06□□□□□ -1.28
VPS25-203ENST00000589520 GAGE12HA6NDE8 117 aa7.06□□□□□ -1.28
VPS25-203ENST00000589520 F8WDY8 70 aa7.06□□□□□ -1.28
VPS25-203ENST00000589520 RPL13AP40429 203 aaKnown RBP7.06□□□□□ -1.28
VPS25-203ENST00000589520 LINC01556Q5JQF7 62 aa7.06□□□□□ -1.28
VPS25-203ENST00000589520 ENHOQ6UWT2 76 aa7.06□□□□□ -1.28
VPS25-203ENST00000589520 LINC01600Q96MT4 127 aa7.06□□□□□ -1.28
VPS25-203ENST00000589520 SND1-IT1Q9HBX3 110 aa7.06□□□□□ -1.28
VPS25-203ENST00000589520 H7C2G1 150 aa7.05□□□□□ -1.28
VPS25-203ENST00000589520 ESRGQ1W209 222 aa7.05□□□□□ -1.28
VPS25-203ENST00000589520 SOSTDC1Q6X4U4 206 aa7.05□□□□□ -1.28
VPS25-203ENST00000589520 IGLV10-54A0A075B6I4 117 aa7.04□□□□□ -1.28
VPS25-203ENST00000589520 GVQW2A0A096LPI5 108 aaPredicted RBP7.04□□□□□ -1.28
VPS25-203ENST00000589520 TRIAP1O43715 76 aa7.04□□□□□ -1.28
VPS25-203ENST00000589520 NDUFC2O95298 119 aa7.04□□□□□ -1.28
VPS25-203ENST00000589520 WFDC2Q14508 124 aa7.04□□□□□ -1.28
VPS25-203ENST00000589520 UBE2WQ96B02 151 aa7.04□□□□□ -1.28
VPS25-203ENST00000589520 EPPK1P58107 5090 aaKnown RBP7.03□□□□□ -1.28
VPS25-203ENST00000589520 PFN2P35080 140 aa7.03□□□□□ -1.28
VPS25-203ENST00000589520 CCL18P55774 89 aa7.03□□□□□ -1.28
VPS25-203ENST00000589520 SPAG11BQ08648 103 aa7.03□□□□□ -1.28
VPS25-203ENST00000589520 VWFP04275 2813 aa7.02□□□□□ -1.29
VPS25-203ENST00000589520 TRBV10-2A0A0K0K1G8 114 aa7.02□□□□□ -1.29
VPS25-203ENST00000589520 DNAH10OSP0CZ25 163 aa7.02□□□□□ -1.29
VPS25-203ENST00000589520 RPL28P46779 137 aaKnown RBP7.02□□□□□ -1.29
VPS25-203ENST00000589520 LINC01620Q4KN68 170 aa7.02□□□□□ -1.29
VPS25-203ENST00000589520 WFDC10BQ8IUB3 73 aa7.02□□□□□ -1.29
VPS25-203ENST00000589520 Q8N3U1 123 aa7.02□□□□□ -1.29
VPS25-203ENST00000589520 CBY1Q9Y3M2 126 aa7.02□□□□□ -1.29
VPS25-203ENST00000589520 H0YGX0 51 aa7.01□□□□□ -1.29
VPS25-203ENST00000589520 H3BT86 120 aa7.01□□□□□ -1.29
VPS25-203ENST00000589520 LST1O00453 97 aa7.01□□□□□ -1.29
VPS25-203ENST00000589520 SLC25A20O43772 301 aa7.01□□□□□ -1.29
VPS25-203ENST00000589520 CARD19Q96LW7 228 aa7.01□□□□□ -1.29
VPS25-203ENST00000589520 ZNF561-AS1K7EIQ3 104 aa7□□□□□ -1.29
VPS25-203ENST00000589520 TRACP01848 142 aa7□□□□□ -1.29
VPS25-203ENST00000589520 ETDBQ3ZM63 59 aa7□□□□□ -1.29
VPS25-203ENST00000589520 C2orf82Q6UX34 121 aa7□□□□□ -1.29
VPS25-203ENST00000589520 TEN1Q86WV5 123 aa7□□□□□ -1.29
VPS25-203ENST00000589520 ANKRD29Q8N6D5 301 aa7□□□□□ -1.29
VPS25-203ENST00000589520 MRAPQ8TCY5 172 aa7□□□□□ -1.29
VPS25-203ENST00000589520 NTN5Q8WTR8 489 aaPredicted RBP7□□□□□ -1.29
VPS25-203ENST00000589520 RMI2Q96E14 147 aa7□□□□□ -1.29
VPS25-203ENST00000589520 C2orf48Q96LS8 159 aa7□□□□□ -1.29
VPS25-203ENST00000589520 C1orf43Q9BWL3 253 aa7□□□□□ -1.29
VPS25-203ENST00000589520 CMYA5Q8N3K9 4069 aa7□□□□□ -1.29
VPS25-203ENST00000589520 DNAH3Q8TD57 4116 aa6.99□□□□□ -1.29
VPS25-203ENST00000589520 C9JAW5 83 aa6.99□□□□□ -1.29
VPS25-203ENST00000589520 SMCPP49901 116 aaPredicted RBP6.99□□□□□ -1.29
VPS25-203ENST00000589520 UPK3BQ9BT76 320 aa6.99□□□□□ -1.29
VPS25-203ENST00000589520 IGKV2-28A0A075B6P5 120 aa6.98□□□□□ -1.29
VPS25-203ENST00000589520 IGKV2D-28P01615 120 aa6.98□□□□□ -1.29
VPS25-203ENST00000589520 PRB2P02812 416 aaPredicted RBP6.98□□□□□ -1.29
VPS25-203ENST00000589520 NHLRC4P0CG21 123 aaPredicted RBP6.98□□□□□ -1.29
VPS25-203ENST00000589520 KRTAP26-1Q6PEX3 210 aa6.98□□□□□ -1.29
VPS25-203ENST00000589520 PPDPFLQ8WWR9 84 aa6.98□□□□□ -1.29
VPS25-203ENST00000589520 B9D2Q9BPU9 175 aa6.98□□□□□ -1.29
VPS25-203ENST00000589520 LINC00337Q8N6G1 96 aa6.97□□□□□ -1.29
VPS25-203ENST00000589520 VPS25Q9BRG1 176 aa6.97□□□□□ -1.29
VPS25-203ENST00000589520 TMEM126AQ9H061 195 aa6.97□□□□□ -1.29
VPS25-203ENST00000589520 UNQ6190/PRO20217Q6UXQ8 127 aa6.96□□□□□ -1.3
VPS25-203ENST00000589520 LINC00588Q9Y4M8 146 aa6.96□□□□□ -1.3
VPS25-203ENST00000589520 A0A1B0GX51 115 aa6.95□□□□□ -1.3
VPS25-203ENST00000589520 SNCGO76070 127 aa6.95□□□□□ -1.3
VPS25-203ENST00000589520 RNF151Q2KHN1 245 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms