RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 PRSS2P07478 247 aa10.78□□□□□ -0.68
CCDC43-204ENST00000588687 NPSP0C0P6 89 aa10.78□□□□□ -0.68
CCDC43-204ENST00000588687 LBHQ53QV2 105 aaPredicted RBP10.78□□□□□ -0.68
CCDC43-204ENST00000588687 MRPL55Q7Z7F7 128 aaKnown RBP10.78□□□□□ -0.68
CCDC43-204ENST00000588687 LOC389332A0A1B0GUA5 103 aa10.77□□□□□ -0.69
CCDC43-204ENST00000588687 KRTAP13-1Q8IUC0 172 aa10.77□□□□□ -0.69
CCDC43-204ENST00000588687 Q8N8P6 123 aa10.77□□□□□ -0.69
CCDC43-204ENST00000588687 MAP1LC3AQ9H492 121 aa10.77□□□□□ -0.69
CCDC43-204ENST00000588687 F8VRH5 84 aa10.76□□□□□ -0.69
CCDC43-204ENST00000588687 RPL28P46779 137 aaKnown RBP10.76□□□□□ -0.69
CCDC43-204ENST00000588687 PEA15Q15121 130 aa10.76□□□□□ -0.69
CCDC43-204ENST00000588687 KRTAP13-2Q52LG2 175 aa10.76□□□□□ -0.69
CCDC43-204ENST00000588687 C6orf226Q5I0X4 101 aa10.76□□□□□ -0.69
CCDC43-204ENST00000588687 ALKBH7Q9BT30 221 aaPredicted RBP10.76□□□□□ -0.69
CCDC43-204ENST00000588687 CDKN2A-AS1Q9UH64 79 aa10.76□□□□□ -0.69
CCDC43-204ENST00000588687 CRYGAP11844 174 aa10.75□□□□□ -0.69
CCDC43-204ENST00000588687 TYMSOSQ8TAI1 123 aa10.75□□□□□ -0.69
CCDC43-204ENST00000588687 VCX2Q9H322 139 aa10.75□□□□□ -0.69
CCDC43-204ENST00000588687 ANAPC11Q9NYG5 84 aa10.74□□□□□ -0.69
CCDC43-204ENST00000588687 HERVK_113P63121 156 aa10.73□□□□□ -0.69
CCDC43-204ENST00000588687 LINC00167Q96N53 147 aa10.73□□□□□ -0.69
CCDC43-204ENST00000588687 ORMDL2Q53FV1 153 aa10.72□□□□□ -0.69
CCDC43-204ENST00000588687 SMIM1B2RUZ4 78 aa10.71□□□□□ -0.69
CCDC43-204ENST00000588687 K7EMI3 77 aa10.71□□□□□ -0.69
CCDC43-204ENST00000588687 IGLV5-37A0A075B6J1 123 aa10.7□□□□□ -0.7
CCDC43-204ENST00000588687 RPL37AP8A6NKH3 93 aa10.7□□□□□ -0.7
CCDC43-204ENST00000588687 CXCL5P42830 114 aa10.7□□□□□ -0.7
CCDC43-204ENST00000588687 RETNLBQ9BQ08 111 aa10.7□□□□□ -0.7
CCDC43-204ENST00000588687 SEC11AP67812 179 aa10.69□□□□□ -0.7
CCDC43-204ENST00000588687 TIMM17AQ99595 171 aa10.69□□□□□ -0.7
CCDC43-204ENST00000588687 IGLV5-45A0A087WSX0 123 aa10.67□□□□□ -0.7
CCDC43-204ENST00000588687 GAGE10A6NGK3 116 aa10.67□□□□□ -0.7
CCDC43-204ENST00000588687 TPRXLQ17RH7 258 aa10.67□□□□□ -0.7
CCDC43-204ENST00000588687 FAM229BQ4G0N7 80 aa10.67□□□□□ -0.7
CCDC43-204ENST00000588687 TOMM6Q96B49 74 aa10.67□□□□□ -0.7
CCDC43-204ENST00000588687 GEMIN7Q9H840 131 aaKnown RBP10.66□□□□□ -0.7
CCDC43-204ENST00000588687 NXT2Q9NPJ8 142 aaKnown RBP10.66□□□□□ -0.7
CCDC43-204ENST00000588687 KRTAP9-6A0A140TA67 174 aa10.65□□□□□ -0.7
CCDC43-204ENST00000588687 PAPPA-AS1Q5QFB9 102 aa10.65□□□□□ -0.7
CCDC43-204ENST00000588687 LINC00304Q8N9R0 145 aa10.65□□□□□ -0.7
CCDC43-204ENST00000588687 PNRC1Q12796 327 aaPredicted RBP10.64□□□□□ -0.71
CCDC43-204ENST00000588687 PDZD11Q5EBL8 140 aa10.64□□□□□ -0.71
CCDC43-204ENST00000588687 COX7B2Q8TF08 81 aa10.64□□□□□ -0.71
CCDC43-204ENST00000588687 A0A1B0GVG6 124 aa10.63□□□□□ -0.71
CCDC43-204ENST00000588687 TINCRA0A1B0GVN0 87 aa10.62□□□□□ -0.71
CCDC43-204ENST00000588687 SCO1O75880 301 aa10.62□□□□□ -0.71
CCDC43-204ENST00000588687 ADCYAP1P18509 176 aa10.62□□□□□ -0.71
CCDC43-204ENST00000588687 ERASQ7Z444 233 aa10.62□□□□□ -0.71
CCDC43-204ENST00000588687 UBE2AP49459 152 aa10.61□□□□□ -0.71
CCDC43-204ENST00000588687 ANAPC16Q96DE5 110 aa10.61□□□□□ -0.71
CCDC43-204ENST00000588687 IGKV2-28A0A075B6P5 120 aa10.59□□□□□ -0.71
CCDC43-204ENST00000588687 IGKV2D-28P01615 120 aa10.59□□□□□ -0.71
CCDC43-204ENST00000588687 PRLHP81277 87 aa10.59□□□□□ -0.71
CCDC43-204ENST00000588687 NKAPP1Q8N9T2 125 aa10.59□□□□□ -0.71
CCDC43-204ENST00000588687 CDIP1Q9H305 208 aa10.59□□□□□ -0.71
CCDC43-204ENST00000588687 IGLV7-46A0A075B6I9 117 aa10.58□□□□□ -0.72
CCDC43-204ENST00000588687 MT-ND4LP03901 98 aa10.58□□□□□ -0.72
CCDC43-204ENST00000588687 SPINK8P0C7L1 97 aa10.58□□□□□ -0.72
CCDC43-204ENST00000588687 G0S2P27469 103 aa10.58□□□□□ -0.72
CCDC43-204ENST00000588687 RAB5BP61020 215 aa10.58□□□□□ -0.72
CCDC43-204ENST00000588687 CTAG1AP78358 180 aa10.58□□□□□ -0.72
CCDC43-204ENST00000588687 LINC01546A6NGU7 62 aa10.57□□□□□ -0.72
CCDC43-204ENST00000588687 SCGB3A1Q96QR1 104 aa10.57□□□□□ -0.72
CCDC43-204ENST00000588687 VPREB1P12018 145 aa10.56□□□□□ -0.72
CCDC43-204ENST00000588687 KIAA1644Q3SXP7 199 aa10.56□□□□□ -0.72
CCDC43-204ENST00000588687 CST9LQ9H4G1 147 aa10.56□□□□□ -0.72
CCDC43-204ENST00000588687 IGKV2D-26A0A0A0MRZ7 120 aa10.55□□□□□ -0.72
CCDC43-204ENST00000588687 TMEM238C9JI98 176 aa10.55□□□□□ -0.72
CCDC43-204ENST00000588687 Q8NDZ9 215 aa10.55□□□□□ -0.72
CCDC43-204ENST00000588687 TMEM126AQ9H061 195 aa10.55□□□□□ -0.72
CCDC43-204ENST00000588687 IGLV5-39A0A0G2JS06 123 aa10.53□□□□□ -0.72
CCDC43-204ENST00000588687 M0R378 163 aa10.53□□□□□ -0.72
CCDC43-204ENST00000588687 C3orf22Q8N5N4 141 aa10.53□□□□□ -0.72
CCDC43-204ENST00000588687 PLEKHB2Q96CS7 222 aa10.52□□□□□ -0.73
CCDC43-204ENST00000588687 ATP5LO75964 103 aa10.51□□□□□ -0.73
CCDC43-204ENST00000588687 FAM19A1Q7Z5A9 133 aa10.51□□□□□ -0.73
CCDC43-204ENST00000588687 PPDPFQ9H3Y8 114 aa10.51□□□□□ -0.73
CCDC43-204ENST00000588687 SND1-IT1Q9HBX3 110 aa10.51□□□□□ -0.73
CCDC43-204ENST00000588687 PFN2P35080 140 aa10.5□□□□□ -0.73
CCDC43-204ENST00000588687 PMVKQ15126 192 aa10.5□□□□□ -0.73
CCDC43-204ENST00000588687 MRPL18Q9H0U6 180 aaKnown RBP10.5□□□□□ -0.73
CCDC43-204ENST00000588687 LINC01549A6NIU2 74 aa10.49□□□□□ -0.73
CCDC43-204ENST00000588687 IGLC3P0DOY3 106 aa10.48□□□□□ -0.73
CCDC43-204ENST00000588687 ERG28Q9UKR5 140 aa10.47□□□□□ -0.73
CCDC43-204ENST00000588687 H3BRM9 83 aa10.46□□□□□ -0.73
CCDC43-204ENST00000588687 ZNF22P17026 224 aaPredicted RBP10.46□□□□□ -0.73
CCDC43-204ENST00000588687 TRAV9-1A0A075B6T8 112 aa10.45□□□□□ -0.74
CCDC43-204ENST00000588687 A0A096LNJ9 63 aa10.45□□□□□ -0.74
CCDC43-204ENST00000588687 CBLN2Q8IUK8 224 aa10.45□□□□□ -0.74
CCDC43-204ENST00000588687 COX17Q14061 63 aa10.44□□□□□ -0.74
CCDC43-204ENST00000588687 KRTAP13-3Q3SY46 172 aa10.44□□□□□ -0.74
CCDC43-204ENST00000588687 FP248Q71RG6 208 aaPredicted RBP10.44□□□□□ -0.74
CCDC43-204ENST00000588687 SPRR4Q96PI1 79 aa10.44□□□□□ -0.74
CCDC43-204ENST00000588687 SPAG11AQ6PDA7 123 aa10.43□□□□□ -0.74
CCDC43-204ENST00000588687 GNB1LQ9BYB4 327 aa10.43□□□□□ -0.74
CCDC43-204ENST00000588687 KRTAP4-1Q9BYQ7 146 aa10.43□□□□□ -0.74
CCDC43-204ENST00000588687 FSIP2Q5CZC0 6907 aa10.42□□□□□ -0.74
CCDC43-204ENST00000588687 RPL24P83731 157 aaKnown RBP10.42□□□□□ -0.74
CCDC43-204ENST00000588687 HIGD2AQ9BW72 106 aa10.42□□□□□ -0.74
CCDC43-204ENST00000588687 RAB14P61106 215 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms