RNA–Protein interactions for RNA: ENST00000586813.5

TRAF4-216, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-216ENST00000586813 K7EMI3 77 aa11.51□□□□□ -0.57
TRAF4-216ENST00000586813 HERVK_113P63121 156 aa11.5□□□□□ -0.57
TRAF4-216ENST00000586813 LBHQ53QV2 105 aaPredicted RBP11.5□□□□□ -0.57
TRAF4-216ENST00000586813 PNRC1Q12796 327 aaPredicted RBP11.49□□□□□ -0.57
TRAF4-216ENST00000586813 CDKN2A-AS1Q9UH64 79 aa11.49□□□□□ -0.57
TRAF4-216ENST00000586813 F8VRH5 84 aa11.48□□□□□ -0.57
TRAF4-216ENST00000586813 SEC11AP67812 179 aa11.48□□□□□ -0.57
TRAF4-216ENST00000586813 ANAPC16Q96DE5 110 aa11.48□□□□□ -0.57
TRAF4-216ENST00000586813 CTDSP1Q9GZU7 261 aa11.48□□□□□ -0.57
TRAF4-216ENST00000586813 MT-ND4LP03901 98 aa11.47□□□□□ -0.57
TRAF4-216ENST00000586813 IFITM2Q01629 132 aa11.47□□□□□ -0.57
TRAF4-216ENST00000586813 PAPPA-AS1Q5QFB9 102 aa11.47□□□□□ -0.57
TRAF4-216ENST00000586813 MRPL55Q7Z7F7 128 aaKnown RBP11.47□□□□□ -0.57
TRAF4-216ENST00000586813 GEMIN7Q9H840 131 aaKnown RBP11.47□□□□□ -0.57
TRAF4-216ENST00000586813 NXT2Q9NPJ8 142 aaKnown RBP11.47□□□□□ -0.57
TRAF4-216ENST00000586813 TP73-AS1Q9UF72 201 aa11.47□□□□□ -0.57
TRAF4-216ENST00000586813 UQCC3Q6UW78 93 aa11.46□□□□□ -0.57
TRAF4-216ENST00000586813 CXCL5P42830 114 aa11.45□□□□□ -0.58
TRAF4-216ENST00000586813 TIMM17AQ99595 171 aa11.45□□□□□ -0.58
TRAF4-216ENST00000586813 A0A087X002 238 aa11.44□□□□□ -0.58
TRAF4-216ENST00000586813 BCE1O60756 84 aa11.44□□□□□ -0.58
TRAF4-216ENST00000586813 RPL28P46779 137 aaKnown RBP11.44□□□□□ -0.58
TRAF4-216ENST00000586813 TSPAN13O95857 204 aa11.43□□□□□ -0.58
TRAF4-216ENST00000586813 G0S2P27469 103 aa11.43□□□□□ -0.58
TRAF4-216ENST00000586813 TOMM6Q96B49 74 aa11.43□□□□□ -0.58
TRAF4-216ENST00000586813 SMIM1B2RUZ4 78 aa11.42□□□□□ -0.58
TRAF4-216ENST00000586813 COMMD7Q86VX2 200 aa11.41□□□□□ -0.58
TRAF4-216ENST00000586813 CRYGAP11844 174 aa11.4□□□□□ -0.58
TRAF4-216ENST00000586813 LINC00167Q96N53 147 aa11.4□□□□□ -0.58
TRAF4-216ENST00000586813 TMEM218A2RU14 115 aa11.39□□□□□ -0.59
TRAF4-216ENST00000586813 RPL37AP8A6NKH3 93 aa11.39□□□□□ -0.59
TRAF4-216ENST00000586813 ERASQ7Z444 233 aa11.39□□□□□ -0.59
TRAF4-216ENST00000586813 TYMSOSQ8TAI1 123 aa11.39□□□□□ -0.59
TRAF4-216ENST00000586813 PDZD11Q5EBL8 140 aa11.38□□□□□ -0.59
TRAF4-216ENST00000586813 COX7B2Q8TF08 81 aa11.38□□□□□ -0.59
TRAF4-216ENST00000586813 SCGB3A1Q96QR1 104 aa11.38□□□□□ -0.59
TRAF4-216ENST00000586813 IGLV5-45A0A087WSX0 123 aa11.37□□□□□ -0.59
TRAF4-216ENST00000586813 TINCRA0A1B0GVN0 87 aa11.37□□□□□ -0.59
TRAF4-216ENST00000586813 GAGE10A6NGK3 116 aa11.37□□□□□ -0.59
TRAF4-216ENST00000586813 KIAA1644Q3SXP7 199 aa11.37□□□□□ -0.59
TRAF4-216ENST00000586813 A0A0U1RQV1 116 aa11.36□□□□□ -0.59
TRAF4-216ENST00000586813 ADCYAP1P18509 176 aa11.36□□□□□ -0.59
TRAF4-216ENST00000586813 IGLV5-37A0A075B6J1 123 aa11.35□□□□□ -0.59
TRAF4-216ENST00000586813 KRTAP13-1Q8IUC0 172 aa11.35□□□□□ -0.59
TRAF4-216ENST00000586813 SEC11CQ9BY50 192 aa11.35□□□□□ -0.59
TRAF4-216ENST00000586813 ANAPC11Q9NYG5 84 aa11.34□□□□□ -0.59
TRAF4-216ENST00000586813 SPINK8P0C7L1 97 aa11.33□□□□□ -0.6
TRAF4-216ENST00000586813 NKAPP1Q8N9T2 125 aa11.33□□□□□ -0.6
TRAF4-216ENST00000586813 UBE2AP49459 152 aa11.32□□□□□ -0.6
TRAF4-216ENST00000586813 RAB5BP61020 215 aa11.32□□□□□ -0.6
TRAF4-216ENST00000586813 KRTAP13-2Q52LG2 175 aa11.32□□□□□ -0.6
TRAF4-216ENST00000586813 CST9LQ9H4G1 147 aa11.32□□□□□ -0.6
TRAF4-216ENST00000586813 LINC01549A6NIU2 74 aa11.31□□□□□ -0.6
TRAF4-216ENST00000586813 S100PP25815 95 aa11.31□□□□□ -0.6
TRAF4-216ENST00000586813 LINC01546A6NGU7 62 aa11.3□□□□□ -0.6
TRAF4-216ENST00000586813 FAM229BQ4G0N7 80 aa11.29□□□□□ -0.6
TRAF4-216ENST00000586813 IGKV2-28A0A075B6P5 120 aa11.28□□□□□ -0.6
TRAF4-216ENST00000586813 TRAV9-1A0A075B6T8 112 aa11.28□□□□□ -0.6
TRAF4-216ENST00000586813 SCO1O75880 301 aa11.28□□□□□ -0.6
TRAF4-216ENST00000586813 ATP5LO75964 103 aa11.28□□□□□ -0.6
TRAF4-216ENST00000586813 IGKV2D-28P01615 120 aa11.28□□□□□ -0.6
TRAF4-216ENST00000586813 PMVKQ15126 192 aa11.28□□□□□ -0.6
TRAF4-216ENST00000586813 NDUFA5Q16718 116 aa11.27□□□□□ -0.61
TRAF4-216ENST00000586813 RETNLBQ9BQ08 111 aa11.27□□□□□ -0.61
TRAF4-216ENST00000586813 MRPL18Q9H0U6 180 aaKnown RBP11.27□□□□□ -0.61
TRAF4-216ENST00000586813 H3BRM9 83 aa11.26□□□□□ -0.61
TRAF4-216ENST00000586813 LINC00304Q8N9R0 145 aa11.26□□□□□ -0.61
TRAF4-216ENST00000586813 RPS10P5Q9NQ39 176 aa11.26□□□□□ -0.61
TRAF4-216ENST00000586813 GNB1LQ9BYB4 327 aa11.25□□□□□ -0.61
TRAF4-216ENST00000586813 PFN2P35080 140 aa11.24□□□□□ -0.61
TRAF4-216ENST00000586813 PRLHP81277 87 aa11.24□□□□□ -0.61
TRAF4-216ENST00000586813 RHEBQ15382 184 aa11.24□□□□□ -0.61
TRAF4-216ENST00000586813 FA2HQ7L5A8 372 aa11.23□□□□□ -0.61
TRAF4-216ENST00000586813 IGKV2D-26A0A0A0MRZ7 120 aa11.22□□□□□ -0.61
TRAF4-216ENST00000586813 IGLV5-39A0A0G2JS06 123 aa11.22□□□□□ -0.61
TRAF4-216ENST00000586813 IGLC3P0DOY3 106 aa11.22□□□□□ -0.61
TRAF4-216ENST00000586813 VPREB1P12018 145 aa11.22□□□□□ -0.61
TRAF4-216ENST00000586813 C10orf91Q5T1B1 145 aa11.22□□□□□ -0.61
TRAF4-216ENST00000586813 SND1-IT1Q9HBX3 110 aa11.22□□□□□ -0.61
TRAF4-216ENST00000586813 SMCO4Q9NRQ5 59 aa11.22□□□□□ -0.61
TRAF4-216ENST00000586813 FAT4Q6V0I7 4981 aa11.22□□□□□ -0.61
TRAF4-216ENST00000586813 MUC17Q685J3 4493 aa11.21□□□□□ -0.61
TRAF4-216ENST00000586813 TMEM238C9JI98 176 aa11.21□□□□□ -0.61
TRAF4-216ENST00000586813 APOC3P02656 99 aa11.21□□□□□ -0.61
TRAF4-216ENST00000586813 FAM19A1Q7Z5A9 133 aa11.21□□□□□ -0.61
TRAF4-216ENST00000586813 KRTAP9-2Q9BYQ4 174 aa11.21□□□□□ -0.61
TRAF4-216ENST00000586813 TMEM126AQ9H061 195 aa11.21□□□□□ -0.61
TRAF4-216ENST00000586813 LCE2AQ5TA79 106 aaPredicted RBP11.2□□□□□ -0.62
TRAF4-216ENST00000586813 ERG28Q9UKR5 140 aa11.2□□□□□ -0.62
TRAF4-216ENST00000586813 ZNF22P17026 224 aaPredicted RBP11.19□□□□□ -0.62
TRAF4-216ENST00000586813 TPRXLQ17RH7 258 aa11.19□□□□□ -0.62
TRAF4-216ENST00000586813 COX19Q49B96 90 aa11.19□□□□□ -0.62
TRAF4-216ENST00000586813 SVBPQ8N300 66 aa11.19□□□□□ -0.62
TRAF4-216ENST00000586813 SNAPINO95295 136 aa11.18□□□□□ -0.62
TRAF4-216ENST00000586813 RPL24P83731 157 aaKnown RBP11.18□□□□□ -0.62
TRAF4-216ENST00000586813 CDIP1Q9H305 208 aa11.18□□□□□ -0.62
TRAF4-216ENST00000586813 A0A096LNJ9 63 aa11.17□□□□□ -0.62
TRAF4-216ENST00000586813 M0R378 163 aa11.17□□□□□ -0.62
TRAF4-216ENST00000586813 NDUFA6P56556 154 aa11.17□□□□□ -0.62
TRAF4-216ENST00000586813 CTAG1AP78358 180 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms