RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 MYCBP2O75592 4640 aa1.24□□□□□ -2.21
SMCHD1-211ENST00000584897 NOTCH1P46531 2555 aa1.24□□□□□ -2.21
SMCHD1-211ENST00000584897 PLCE1Q9P212 2302 aa1.24□□□□□ -2.21
SMCHD1-211ENST00000584897 ARID1AO14497 2285 aa1.24□□□□□ -2.21
SMCHD1-211ENST00000584897 TRBV25-1A0A075B6N4 114 aa1.24□□□□□ -2.21
SMCHD1-211ENST00000584897 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.24□□□□□ -2.21
SMCHD1-211ENST00000584897 C19orf71A6NCJ1 209 aa1.24□□□□□ -2.21
SMCHD1-211ENST00000584897 IGHV3-7P01780 117 aa1.24□□□□□ -2.21
SMCHD1-211ENST00000584897 S100A1P23297 94 aa1.24□□□□□ -2.21
SMCHD1-211ENST00000584897 IQCJQ1A5X6 159 aa1.24□□□□□ -2.21
SMCHD1-211ENST00000584897 Q5BKY6 102 aa1.24□□□□□ -2.21
SMCHD1-211ENST00000584897 SPANXN1Q5VSR9 72 aa1.24□□□□□ -2.21
SMCHD1-211ENST00000584897 MIR17HGQ75NE6 70 aa1.24□□□□□ -2.21
SMCHD1-211ENST00000584897 C2orf88Q9BSF0 95 aa1.24□□□□□ -2.21
SMCHD1-211ENST00000584897 AGPAT4-IT1Q9H0P7 198 aa1.24□□□□□ -2.21
SMCHD1-211ENST00000584897 NIT2Q9NQR4 276 aa1.24□□□□□ -2.21
SMCHD1-211ENST00000584897 CRCT1Q9UGL9 99 aa1.24□□□□□ -2.21
SMCHD1-211ENST00000584897 CNTRLQ7Z7A1 2325 aa1.24□□□□□ -2.21
SMCHD1-211ENST00000584897 IGLV2-18A0A075B6J9 118 aa1.24□□□□□ -2.21
SMCHD1-211ENST00000584897 ZNF727A8MUV8 499 aa1.24□□□□□ -2.21
SMCHD1-211ENST00000584897 E7EUB6 86 aa1.24□□□□□ -2.21
SMCHD1-211ENST00000584897 IGLC6P0CF74 106 aa1.24□□□□□ -2.21
SMCHD1-211ENST00000584897 ESDP10768 282 aa1.24□□□□□ -2.21
SMCHD1-211ENST00000584897 TMEM258P61165 79 aa1.24□□□□□ -2.21
SMCHD1-211ENST00000584897 RBX1P62877 108 aa1.24□□□□□ -2.21
SMCHD1-211ENST00000584897 Q6ZQT7 251 aa1.24□□□□□ -2.21
SMCHD1-211ENST00000584897 RPP25LQ8N5L8 163 aaKnown RBP1.24□□□□□ -2.21
SMCHD1-211ENST00000584897 C3orf22Q8N5N4 141 aa1.24□□□□□ -2.21
SMCHD1-211ENST00000584897 OR10D4PQ8NGN7 298 aa1.24□□□□□ -2.21
SMCHD1-211ENST00000584897 APLNQ9ULZ1 77 aa1.24□□□□□ -2.21
SMCHD1-211ENST00000584897 ALPK2Q86TB3 2170 aa1.24□□□□□ -2.21
SMCHD1-211ENST00000584897 TRBV7-3A0A075B6L6 115 aa1.23□□□□□ -2.21
SMCHD1-211ENST00000584897 IGKV1OR2-108A0A075B7D4 117 aa1.23□□□□□ -2.21
SMCHD1-211ENST00000584897 IBA57-AS1B1ANH7 110 aa1.23□□□□□ -2.21
SMCHD1-211ENST00000584897 I3L3M4 83 aa1.23□□□□□ -2.21
SMCHD1-211ENST00000584897 CRPP02741 224 aa1.23□□□□□ -2.21
SMCHD1-211ENST00000584897 LINC00694P0DN24 101 aa1.23□□□□□ -2.21
SMCHD1-211ENST00000584897 HLA-DMBP28068 263 aa1.23□□□□□ -2.21
SMCHD1-211ENST00000584897 HIST1H4AP62805 103 aaKnown RBP1.23□□□□□ -2.21
SMCHD1-211ENST00000584897 HBBP68871 147 aa1.23□□□□□ -2.21
SMCHD1-211ENST00000584897 GOLT1AQ6ZVE7 132 aa1.23□□□□□ -2.21
SMCHD1-211ENST00000584897 C1orf158Q8N1D5 194 aa1.23□□□□□ -2.21
SMCHD1-211ENST00000584897 CHCHD1Q96BP2 118 aaKnown RBP1.23□□□□□ -2.21
SMCHD1-211ENST00000584897 LINC00526Q96FQ7 95 aa1.23□□□□□ -2.21
SMCHD1-211ENST00000584897 SMIM7Q9BQ49 75 aa1.23□□□□□ -2.21
SMCHD1-211ENST00000584897 ST20Q9HBF5 79 aa1.23□□□□□ -2.21
SMCHD1-211ENST00000584897 HHLA3Q9XRX5 114 aa1.23□□□□□ -2.21
SMCHD1-211ENST00000584897 IGHV3-73A0A0B4J1V6 119 aa1.23□□□□□ -2.21
SMCHD1-211ENST00000584897 SMIM27A0A1W2PRY6 76 aa1.23□□□□□ -2.21
SMCHD1-211ENST00000584897 LINC01546A6NGU7 62 aa1.23□□□□□ -2.21
SMCHD1-211ENST00000584897 H3BRM9 83 aa1.23□□□□□ -2.21
SMCHD1-211ENST00000584897 PSCAO43653 123 aa1.23□□□□□ -2.21
SMCHD1-211ENST00000584897 SS18Q15532 418 aa1.23□□□□□ -2.21
SMCHD1-211ENST00000584897 KIF25-AS1Q9Y6Z4 181 aa1.23□□□□□ -2.21
SMCHD1-211ENST00000584897 IGHV1-58A0A0C4DH39 117 aa1.23□□□□□ -2.21
SMCHD1-211ENST00000584897 RNASE4P34096 147 aaKnown RBP1.23□□□□□ -2.21
SMCHD1-211ENST00000584897 C10orf91Q5T1B1 145 aa1.23□□□□□ -2.21
SMCHD1-211ENST00000584897 C1orf134Q5TEV5 83 aa1.23□□□□□ -2.21
SMCHD1-211ENST00000584897 MRPL54Q6P161 138 aaKnown RBP1.23□□□□□ -2.21
SMCHD1-211ENST00000584897 Q6ZRU5 148 aa1.23□□□□□ -2.21
SMCHD1-211ENST00000584897 SBSPONQ8IVN8 264 aa1.23□□□□□ -2.21
SMCHD1-211ENST00000584897 RNF182Q8N6D2 247 aa1.23□□□□□ -2.21
SMCHD1-211ENST00000584897 TENM3Q9P273 2699 aa1.22□□□□□ -2.21
SMCHD1-211ENST00000584897 IGKV2-24A0A0C4DH68 120 aa1.22□□□□□ -2.21
SMCHD1-211ENST00000584897 A0A1B0GW54 56 aa1.22□□□□□ -2.21
SMCHD1-211ENST00000584897 ZNF815PA8K554 130 aa1.22□□□□□ -2.21
SMCHD1-211ENST00000584897 H3BQ15 152 aa1.22□□□□□ -2.21
SMCHD1-211ENST00000584897 NUPR1O60356 82 aa1.22□□□□□ -2.21
SMCHD1-211ENST00000584897 SNCGO76070 127 aa1.22□□□□□ -2.21
SMCHD1-211ENST00000584897 FGF6P10767 208 aa1.22□□□□□ -2.21
SMCHD1-211ENST00000584897 RPL35P42766 123 aaKnown RBP1.22□□□□□ -2.21
SMCHD1-211ENST00000584897 DEFB136Q30KP8 78 aa1.22□□□□□ -2.21
SMCHD1-211ENST00000584897 C12orf74Q32Q52 190 aa1.22□□□□□ -2.21
SMCHD1-211ENST00000584897 NTM-AS1Q6ZSK4 140 aa1.22□□□□□ -2.21
SMCHD1-211ENST00000584897 LINC00337Q8N6G1 96 aa1.22□□□□□ -2.21
SMCHD1-211ENST00000584897 SMCO4Q9NRQ5 59 aa1.22□□□□□ -2.21
SMCHD1-211ENST00000584897 GNG13Q9P2W3 67 aa1.22□□□□□ -2.21
SMCHD1-211ENST00000584897 TRGV1A0A0A0MS02 117 aa1.22□□□□□ -2.21
SMCHD1-211ENST00000584897 TRBV27A0A0K0K1C4 114 aa1.22□□□□□ -2.21
SMCHD1-211ENST00000584897 NBDYA0A0U1RRE5 68 aa1.22□□□□□ -2.21
SMCHD1-211ENST00000584897 C20orf202A1L168 122 aa1.22□□□□□ -2.21
SMCHD1-211ENST00000584897 G3V3Q6 166 aa1.22□□□□□ -2.21
SMCHD1-211ENST00000584897 UBE2D3P61077 147 aa1.22□□□□□ -2.21
SMCHD1-211ENST00000584897 UBE2D2P62837 147 aa1.22□□□□□ -2.21
SMCHD1-211ENST00000584897 COX17Q14061 63 aa1.22□□□□□ -2.21
SMCHD1-211ENST00000584897 OR5A1Q8NGJ0 315 aa1.22□□□□□ -2.21
SMCHD1-211ENST00000584897 SMIM2Q9BVW6 85 aa1.22□□□□□ -2.21
SMCHD1-211ENST00000584897 LAMTOR3Q9UHA4 124 aa1.22□□□□□ -2.21
SMCHD1-211ENST00000584897 ARHGAP32A7KAX9 2087 aa1.22□□□□□ -2.21
SMCHD1-211ENST00000584897 IGLV10-54A0A075B6I4 117 aa1.22□□□□□ -2.21
SMCHD1-211ENST00000584897 TRBV30A0A0K0K1B3 111 aa1.22□□□□□ -2.21
SMCHD1-211ENST00000584897 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.22□□□□□ -2.21
SMCHD1-211ENST00000584897 FCER1GP30273 86 aa1.22□□□□□ -2.21
SMCHD1-211ENST00000584897 IFI27P40305 119 aaPredicted RBP1.22□□□□□ -2.21
SMCHD1-211ENST00000584897 NDUFA6P56556 154 aa1.22□□□□□ -2.21
SMCHD1-211ENST00000584897 DEFB135Q30KP9 77 aa1.22□□□□□ -2.21
SMCHD1-211ENST00000584897 Q8N8P6 123 aa1.22□□□□□ -2.21
SMCHD1-211ENST00000584897 UBE2WQ96B02 151 aa1.22□□□□□ -2.21
SMCHD1-211ENST00000584897 HSPB8Q9UJY1 196 aa1.22□□□□□ -2.21
SMCHD1-211ENST00000584897 SONP18583 2426 aaKnown RBP1.22□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms