RNA–Protein interactions for RNA: ENST00000584089.1

SKA2-210, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 4

Gene SKA2, Length 229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-210ENST00000584089 COPZ1P61923 177 aa-0.56□□□□□ -2.5
SKA2-210ENST00000584089 MRPL54Q6P161 138 aaKnown RBP-0.56□□□□□ -2.5
SKA2-210ENST00000584089 COMMD6Q7Z4G1 85 aa-0.56□□□□□ -2.5
SKA2-210ENST00000584089 DPH3Q96FX2 82 aa-0.56□□□□□ -2.5
SKA2-210ENST00000584089 PFDN5Q99471 154 aa-0.56□□□□□ -2.5
SKA2-210ENST00000584089 SPANXDQ9BXN6 97 aa-0.56□□□□□ -2.5
SKA2-210ENST00000584089 NXT2Q9NPJ8 142 aaKnown RBP-0.56□□□□□ -2.5
SKA2-210ENST00000584089 CDC42SE2Q9NRR3 84 aa-0.56□□□□□ -2.5
SKA2-210ENST00000584089 UQCR10Q9UDW1 63 aa-0.56□□□□□ -2.5
SKA2-210ENST00000584089 BCORQ6W2J9 1755 aa-0.56□□□□□ -2.5
SKA2-210ENST00000584089 ADGRL2O95490 1459 aa-0.56□□□□□ -2.5
SKA2-210ENST00000584089 NLRP1Q9C000 1473 aa-0.56□□□□□ -2.5
SKA2-210ENST00000584089 TOP2BQ02880 1626 aa-0.56□□□□□ -2.5
SKA2-210ENST00000584089 TARBP1Q13395 1621 aaKnown RBP-0.56□□□□□ -2.5
SKA2-210ENST00000584089 CICQ96RK0 1608 aaPredicted RBP-0.56□□□□□ -2.5
SKA2-210ENST00000584089 RIF1Q5UIP0 2472 aaKnown RBP-0.57□□□□□ -2.5
SKA2-210ENST00000584089 HYDINQ4G0P3 5121 aa-0.57□□□□□ -2.5
SKA2-210ENST00000584089 TNRC18O15417 2968 aaPredicted RBP-0.57□□□□□ -2.5
SKA2-210ENST00000584089 C8orf59Q8N0T1 100 aaPredicted RBP-0.57□□□□□ -2.5
SKA2-210ENST00000584089 MYOZ3Q8TDC0 251 aa-0.57□□□□□ -2.5
SKA2-210ENST00000584089 LZICQ8WZA0 190 aa-0.57□□□□□ -2.5
SKA2-210ENST00000584089 LINC01600Q96MT4 127 aa-0.57□□□□□ -2.5
SKA2-210ENST00000584089 PDCD10Q9BUL8 212 aa-0.57□□□□□ -2.5
SKA2-210ENST00000584089 TPT1P8Q9HAU6 139 aa-0.57□□□□□ -2.5
SKA2-210ENST00000584089 LINC00846Q9NV44 126 aa-0.57□□□□□ -2.5
SKA2-210ENST00000584089 A2ML1A8K2U0 1454 aa-0.57□□□□□ -2.5
SKA2-210ENST00000584089 PLEKHH2Q8IVE3 1493 aa-0.57□□□□□ -2.5
SKA2-210ENST00000584089 CUL7Q14999 1698 aa-0.57□□□□□ -2.5
SKA2-210ENST00000584089 NCOA3Q9Y6Q9 1424 aa-0.57□□□□□ -2.5
SKA2-210ENST00000584089 AKAP9Q99996 3911 aa-0.57□□□□□ -2.5
SKA2-210ENST00000584089 CHD1O14646 1710 aa-0.58□□□□□ -2.5
SKA2-210ENST00000584089 UNC13AQ9UPW8 1703 aa-0.58□□□□□ -2.5
SKA2-210ENST00000584089 PRRC2CQ9Y520 2896 aaKnown RBP-0.58□□□□□ -2.5
SKA2-210ENST00000584089 NIPBLQ6KC79 2804 aaeCLIP-0.58□□□□□ -2.5
SKA2-210ENST00000584089 ROBO1Q9Y6N7 1651 aa-0.58□□□□□ -2.5
SKA2-210ENST00000584089 FAT3Q8TDW7 4589 aa-0.58□□□□□ -2.5
SKA2-210ENST00000584089 CPSF4LA6NMK7 179 aaKnown RBP-0.58□□□□□ -2.5
SKA2-210ENST00000584089 H0YGG7 62 aa-0.58□□□□□ -2.5
SKA2-210ENST00000584089 COX6CP09669 75 aa-0.58□□□□□ -2.5
SKA2-210ENST00000584089 IGLC1P0CG04 106 aa-0.58□□□□□ -2.5
SKA2-210ENST00000584089 ATP5EP56381 51 aaPredicted RBP-0.58□□□□□ -2.5
SKA2-210ENST00000584089 SMIM21Q3B7S5 101 aa-0.58□□□□□ -2.5
SKA2-210ENST00000584089 C5orf38Q86SI9 138 aa-0.58□□□□□ -2.5
SKA2-210ENST00000584089 AKAP14Q86UN6 197 aa-0.58□□□□□ -2.5
SKA2-210ENST00000584089 ANP32BQ92688 251 aaKnown RBP-0.58□□□□□ -2.5
SKA2-210ENST00000584089 LAMA2P24043 3122 aaKnown RBP-0.58□□□□□ -2.5
SKA2-210ENST00000584089 QSER1Q2KHR3 1735 aa-0.58□□□□□ -2.5
SKA2-210ENST00000584089 TOPAZ1Q8N9V7 1692 aa-0.59□□□□□ -2.5
SKA2-210ENST00000584089 KIF20BQ96Q89 1820 aa-0.59□□□□□ -2.5
SKA2-210ENST00000584089 RGPD8O14715 1765 aaPredicted RBP-0.59□□□□□ -2.5
SKA2-210ENST00000584089 RGPD5Q99666 1765 aa-0.59□□□□□ -2.5
SKA2-210ENST00000584089 C9orf92A6NGG3 77 aa-0.59□□□□□ -2.5
SKA2-210ENST00000584089 F6UZH7 168 aa-0.59□□□□□ -2.5
SKA2-210ENST00000584089 FGF7P21781 194 aa-0.59□□□□□ -2.5
SKA2-210ENST00000584089 ARPC4P59998 168 aa-0.59□□□□□ -2.5
SKA2-210ENST00000584089 UBA52P62987 128 aaKnown RBP-0.59□□□□□ -2.5
SKA2-210ENST00000584089 H1FX-AS1Q4G0G2 97 aa-0.59□□□□□ -2.5
SKA2-210ENST00000584089 Q56UQ5 140 aa-0.59□□□□□ -2.5
SKA2-210ENST00000584089 C9orf153Q5TBE3 101 aa-0.59□□□□□ -2.5
SKA2-210ENST00000584089 FAM223AQ8IWN6 122 aa-0.59□□□□□ -2.5
SKA2-210ENST00000584089 TSTD1Q8NFU3 115 aa-0.59□□□□□ -2.5
SKA2-210ENST00000584089 LSM10Q969L4 123 aaKnown RBP-0.59□□□□□ -2.5
SKA2-210ENST00000584089 APLNQ9ULZ1 77 aa-0.59□□□□□ -2.5
SKA2-210ENST00000584089 CLIP1P30622 1438 aa-0.59□□□□□ -2.5
SKA2-210ENST00000584089 TROQ12816 1431 aaPredicted RBP-0.59□□□□□ -2.5
SKA2-210ENST00000584089 GCN1Q92616 2671 aaKnown RBP-0.59□□□□□ -2.5
SKA2-210ENST00000584089 TIAM2Q8IVF5 1701 aa-0.59□□□□□ -2.5
SKA2-210ENST00000584089 KTN1Q86UP2 1357 aaKnown RBP-0.59□□□□□ -2.5
SKA2-210ENST00000584089 RYR1P21817 5038 aa-0.59□□□□□ -2.5
SKA2-210ENST00000584089 PREX1Q8TCU6 1659 aa-0.59□□□□□ -2.5
SKA2-210ENST00000584089 CUBNO60494 3623 aa-0.59□□□□□ -2.5
SKA2-210ENST00000584089 VPS13DQ5THJ4 4388 aa-0.59□□□□□ -2.5
SKA2-210ENST00000584089 MBD5Q9P267 1494 aa-0.6□□□□□ -2.5
SKA2-210ENST00000584089 CCDC168Q8NDH2 2452 aa-0.6□□□□□ -2.51
SKA2-210ENST00000584089 NALCNQ8IZF0 1738 aa-0.6□□□□□ -2.51
SKA2-210ENST00000584089 CHKB-CPT1BH3BT56 60 aa-0.6□□□□□ -2.51
SKA2-210ENST00000584089 I3L3M4 83 aa-0.6□□□□□ -2.51
SKA2-210ENST00000584089 UBE2D3P61077 147 aa-0.6□□□□□ -2.51
SKA2-210ENST00000584089 UBE2D2P62837 147 aa-0.6□□□□□ -2.51
SKA2-210ENST00000584089 SELENOWP63302 87 aa-0.6□□□□□ -2.51
SKA2-210ENST00000584089 SEC11AP67812 179 aa-0.6□□□□□ -2.51
SKA2-210ENST00000584089 DR1Q01658 176 aa-0.6□□□□□ -2.51
SKA2-210ENST00000584089 CRIPTQ9P021 101 aa-0.6□□□□□ -2.51
SKA2-210ENST00000584089 DNAH9Q9NYC9 4486 aa-0.6□□□□□ -2.51
SKA2-210ENST00000584089 C5P01031 1676 aa-0.6□□□□□ -2.51
SKA2-210ENST00000584089 VPS13BQ7Z7G8 4022 aa-0.61□□□□□ -2.51
SKA2-210ENST00000584089 MON2Q7Z3U7 1717 aa-0.61□□□□□ -2.51
SKA2-210ENST00000584089 UTP20O75691 2785 aaKnown RBP-0.61□□□□□ -2.51
SKA2-210ENST00000584089 NRKQ7Z2Y5 1582 aa-0.61□□□□□ -2.51
SKA2-210ENST00000584089 RYR3Q15413 4870 aa-0.61□□□□□ -2.51
SKA2-210ENST00000584089 UBE2L5PA0A1B0GUS4 154 aa-0.61□□□□□ -2.51
SKA2-210ENST00000584089 LOC100130705A0A1B0GUX0 176 aa-0.61□□□□□ -2.51
SKA2-210ENST00000584089 A0A1B0GWA3 101 aa-0.61□□□□□ -2.51
SKA2-210ENST00000584089 APOC2P02655 101 aa-0.61□□□□□ -2.51
SKA2-210ENST00000584089 UBE2L3P68036 154 aaKnown RBP-0.61□□□□□ -2.51
SKA2-210ENST00000584089 FDCSPQ8NFU4 85 aa-0.61□□□□□ -2.51
SKA2-210ENST00000584089 MRPL34Q9BQ48 92 aaKnown RBP-0.61□□□□□ -2.51
SKA2-210ENST00000584089 ARL2-SNX15V9GYD0 113 aa-0.61□□□□□ -2.51
SKA2-210ENST00000584089 NBEAQ8NFP9 2946 aa-0.61□□□□□ -2.51
SKA2-210ENST00000584089 CUX1P39880 1505 aa-0.61□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms