RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 CIRBPQ14011 172 aaKnown RBP9.93□□□□□ -0.82
SKA2-209ENST00000583976 IFI27L1Q96BM0 104 aa9.93□□□□□ -0.82
SKA2-209ENST00000583976 CDKN2A-AS1Q9UH64 79 aa9.93□□□□□ -0.82
SKA2-209ENST00000583976 TINCRA0A1B0GVN0 87 aa9.92□□□□□ -0.82
SKA2-209ENST00000583976 LEPROTL1O95214 131 aa9.92□□□□□ -0.82
SKA2-209ENST00000583976 FABP4P15090 132 aa9.92□□□□□ -0.82
SKA2-209ENST00000583976 LINC00469Q8N7U9 141 aa9.92□□□□□ -0.82
SKA2-209ENST00000583976 A0A087WYN8 130 aa9.9□□□□□ -0.82
SKA2-209ENST00000583976 H0Y8G0 127 aa9.9□□□□□ -0.82
SKA2-209ENST00000583976 SYCNQ0VAF6 134 aa9.9□□□□□ -0.82
SKA2-209ENST00000583976 OR10D4PQ8NGN7 298 aa9.9□□□□□ -0.82
SKA2-209ENST00000583976 SPACA4Q8TDM5 124 aa9.9□□□□□ -0.82
SKA2-209ENST00000583976 PACRGQ96M98 296 aaPredicted RBP9.9□□□□□ -0.82
SKA2-209ENST00000583976 CAMK2N2Q96S95 79 aa9.9□□□□□ -0.82
SKA2-209ENST00000583976 RNF213Q63HN8 5207 aa9.89□□□□□ -0.83
SKA2-209ENST00000583976 CARD19Q96LW7 228 aa9.89□□□□□ -0.83
SKA2-209ENST00000583976 TOMM7Q9P0U1 55 aa9.89□□□□□ -0.83
SKA2-209ENST00000583976 IGLC3P0DOY3 106 aa9.88□□□□□ -0.83
SKA2-209ENST00000583976 ODF1Q14990 250 aa9.88□□□□□ -0.83
SKA2-209ENST00000583976 Q6ZRU5 148 aa9.88□□□□□ -0.83
SKA2-209ENST00000583976 LINC01561Q8N1V8 128 aa9.88□□□□□ -0.83
SKA2-209ENST00000583976 CHTOPQ9Y3Y2 248 aaKnown RBP9.88□□□□□ -0.83
SKA2-209ENST00000583976 SPINK8P0C7L1 97 aa9.87□□□□□ -0.83
SKA2-209ENST00000583976 C2orf48Q96LS8 159 aa9.87□□□□□ -0.83
SKA2-209ENST00000583976 HSPB8Q9UJY1 196 aa9.87□□□□□ -0.83
SKA2-209ENST00000583976 IGLV5-45A0A087WSX0 123 aa9.86□□□□□ -0.83
SKA2-209ENST00000583976 TRAV12-1A0A0B4J245 112 aa9.86□□□□□ -0.83
SKA2-209ENST00000583976 PRSS2P07478 247 aa9.86□□□□□ -0.83
SKA2-209ENST00000583976 KIAA0087Q14695 138 aa9.86□□□□□ -0.83
SKA2-209ENST00000583976 C11orf86A6NJI1 115 aa9.85□□□□□ -0.83
SKA2-209ENST00000583976 SMIM1B2RUZ4 78 aa9.85□□□□□ -0.83
SKA2-209ENST00000583976 ZNF22P17026 224 aaPredicted RBP9.85□□□□□ -0.83
SKA2-209ENST00000583976 C6orf226Q5I0X4 101 aa9.85□□□□□ -0.83
SKA2-209ENST00000583976 UNQ6190/PRO20217Q6UXQ8 127 aa9.85□□□□□ -0.83
SKA2-209ENST00000583976 MRPL35Q9NZE8 188 aaKnown RBP9.85□□□□□ -0.83
SKA2-209ENST00000583976 H3BRM9 83 aa9.84□□□□□ -0.83
SKA2-209ENST00000583976 NDUFA1O15239 70 aa9.84□□□□□ -0.83
SKA2-209ENST00000583976 TMEM170BQ5T4T1 132 aa9.84□□□□□ -0.83
SKA2-209ENST00000583976 C10orf25Q5T742 122 aa9.84□□□□□ -0.83
SKA2-209ENST00000583976 C2orf82Q6UX34 121 aa9.84□□□□□ -0.83
SKA2-209ENST00000583976 PLAC8Q9NZF1 115 aa9.84□□□□□ -0.83
SKA2-209ENST00000583976 IGKV2-24A0A0C4DH68 120 aa9.83□□□□□ -0.84
SKA2-209ENST00000583976 COA6Q5JTJ3 125 aaKnown RBP9.83□□□□□ -0.84
SKA2-209ENST00000583976 DPH3Q96FX2 82 aa9.83□□□□□ -0.84
SKA2-209ENST00000583976 F8VRH5 84 aa9.82□□□□□ -0.84
SKA2-209ENST00000583976 CKS1BP61024 79 aa9.82□□□□□ -0.84
SKA2-209ENST00000583976 Q8IZM0 81 aa9.82□□□□□ -0.84
SKA2-209ENST00000583976 MAP1LC3CQ9BXW4 147 aa9.82□□□□□ -0.84
SKA2-209ENST00000583976 F8WDY8 70 aa9.81□□□□□ -0.84
SKA2-209ENST00000583976 COX7B2Q8TF08 81 aa9.81□□□□□ -0.84
SKA2-209ENST00000583976 PMCHL2Q9BQD1 86 aa9.81□□□□□ -0.84
SKA2-209ENST00000583976 C6orf48Q9UBA6 75 aa9.81□□□□□ -0.84
SKA2-209ENST00000583976 A0A096LNI7 61 aa9.8□□□□□ -0.84
SKA2-209ENST00000583976 PRR3P79522 188 aaKnown RBP9.8□□□□□ -0.84
SKA2-209ENST00000583976 MAJINQ3KP22 176 aa9.8□□□□□ -0.84
SKA2-209ENST00000583976 LOC107984640A0A0U1RRK4 108 aa9.79□□□□□ -0.84
SKA2-209ENST00000583976 GAGE2BQ13066 116 aa9.79□□□□□ -0.84
SKA2-209ENST00000583976 RNF151Q2KHN1 245 aa9.79□□□□□ -0.84
SKA2-209ENST00000583976 C7orf33Q8WU49 177 aa9.79□□□□□ -0.84
SKA2-209ENST00000583976 RPL18AQ02543 176 aaKnown RBP9.78□□□□□ -0.84
SKA2-209ENST00000583976 C9orf116Q5BN46 136 aaPredicted RBP9.78□□□□□ -0.84
SKA2-209ENST00000583976 IGLV5-39A0A0G2JS06 123 aa9.77□□□□□ -0.85
SKA2-209ENST00000583976 SYS1-DBNDD2H3BUS1 97 aa9.77□□□□□ -0.85
SKA2-209ENST00000583976 STPG4Q8N801 248 aa9.77□□□□□ -0.85
SKA2-209ENST00000583976 PKIGQ9Y2B9 76 aa9.77□□□□□ -0.85
SKA2-209ENST00000583976 TRBV30A0A0K0K1B3 111 aa9.76□□□□□ -0.85
SKA2-209ENST00000583976 TMEM223A0PJW6 202 aa9.76□□□□□ -0.85
SKA2-209ENST00000583976 DPM2O94777 84 aa9.76□□□□□ -0.85
SKA2-209ENST00000583976 S100A6P06703 90 aa9.76□□□□□ -0.85
SKA2-209ENST00000583976 IGKCP01834 107 aa9.75□□□□□ -0.85
SKA2-209ENST00000583976 C3orf79P0CE67 100 aa9.75□□□□□ -0.85
SKA2-209ENST00000583976 CXCL5P42830 114 aa9.75□□□□□ -0.85
SKA2-209ENST00000583976 PTTG1IPP53801 180 aa9.75□□□□□ -0.85
SKA2-209ENST00000583976 KRTDAPP60985 99 aa9.75□□□□□ -0.85
SKA2-209ENST00000583976 PLNP26678 52 aa9.74□□□□□ -0.85
SKA2-209ENST00000583976 GAGE2EQ4V326 116 aa9.74□□□□□ -0.85
SKA2-209ENST00000583976 Q6ZRP5 223 aa9.74□□□□□ -0.85
SKA2-209ENST00000583976 LINC01600Q96MT4 127 aa9.74□□□□□ -0.85
SKA2-209ENST00000583976 KRTAP3-3Q9BYR6 98 aa9.74□□□□□ -0.85
SKA2-209ENST00000583976 KRTAP3-2Q9BYR7 98 aa9.74□□□□□ -0.85
SKA2-209ENST00000583976 GAGE2DQ9UEU5 116 aa9.74□□□□□ -0.85
SKA2-209ENST00000583976 S100A2P29034 98 aa9.73□□□□□ -0.85
SKA2-209ENST00000583976 HIST3H2BBQ8N257 126 aa9.73□□□□□ -0.85
SKA2-209ENST00000583976 LINC00474Q9P2X8 69 aa9.73□□□□□ -0.85
SKA2-209ENST00000583976 TLX1NBP0CAT3 122 aa9.72□□□□□ -0.85
SKA2-209ENST00000583976 SNRPEP62304 92 aaKnown RBP9.72□□□□□ -0.85
SKA2-209ENST00000583976 PET117Q6UWS5 81 aa9.72□□□□□ -0.85
SKA2-209ENST00000583976 NDUFC2-KCTD14E9PQ53 114 aa9.71□□□□□ -0.86
SKA2-209ENST00000583976 ZNF625Q96I27 306 aaPredicted RBP9.71□□□□□ -0.86
SKA2-209ENST00000583976 LINC01545Q5VT33 79 aa9.7□□□□□ -0.86
SKA2-209ENST00000583976 HIST1H2BLQ99880 126 aa9.7□□□□□ -0.86
SKA2-209ENST00000583976 LPAP08519 4548 aa9.7□□□□□ -0.86
SKA2-209ENST00000583976 A0A1W2PNN7 141 aa9.69□□□□□ -0.86
SKA2-209ENST00000583976 PFN2P35080 140 aa9.68□□□□□ -0.86
SKA2-209ENST00000583976 HERVK_113P61574 105 aa9.68□□□□□ -0.86
SKA2-209ENST00000583976 LEPROTO15243 131 aa9.67□□□□□ -0.86
SKA2-209ENST00000583976 XAGE1AQ9HD64 81 aa9.67□□□□□ -0.86
SKA2-209ENST00000583976 FAM168BA1KXE4 195 aa9.66□□□□□ -0.86
SKA2-209ENST00000583976 C5orf52A6NGY3 159 aa9.66□□□□□ -0.86
SKA2-209ENST00000583976 TSPEAR-AS2P59090 65 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms