RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.42□□□□□ -1.06
SS18-222ENST00000582792 HIST1H2BHQ93079 126 aa8.42□□□□□ -1.06
SS18-222ENST00000582792 HIST1H2BNQ99877 126 aa8.42□□□□□ -1.06
SS18-222ENST00000582792 HIST1H2BMQ99879 126 aa8.42□□□□□ -1.06
SS18-222ENST00000582792 APOMO95445 188 aa8.41□□□□□ -1.06
SS18-222ENST00000582792 HERVK_113P63121 156 aa8.41□□□□□ -1.06
SS18-222ENST00000582792 PMCHL1Q16048 86 aa8.41□□□□□ -1.06
SS18-222ENST00000582792 CST9LQ9H4G1 147 aa8.41□□□□□ -1.06
SS18-222ENST00000582792 A0A087WZ39 114 aa8.4□□□□□ -1.06
SS18-222ENST00000582792 COA6Q5JTJ3 125 aaKnown RBP8.4□□□□□ -1.06
SS18-222ENST00000582792 ZC2HC1BQ5TFG8 222 aa8.4□□□□□ -1.06
SS18-222ENST00000582792 Q6ZRP5 223 aa8.4□□□□□ -1.06
SS18-222ENST00000582792 PKIGQ9Y2B9 76 aa8.4□□□□□ -1.06
SS18-222ENST00000582792 TINCRA0A1B0GVN0 87 aa8.39□□□□□ -1.07
SS18-222ENST00000582792 MALP21145 153 aa8.39□□□□□ -1.07
SS18-222ENST00000582792 OR10D4PQ8NGN7 298 aa8.39□□□□□ -1.07
SS18-222ENST00000582792 PACRGQ96M98 296 aaPredicted RBP8.39□□□□□ -1.07
SS18-222ENST00000582792 TRAV12-1A0A0B4J245 112 aa8.38□□□□□ -1.07
SS18-222ENST00000582792 F8WDY8 70 aa8.38□□□□□ -1.07
SS18-222ENST00000582792 C5orf38Q86SI9 138 aa8.38□□□□□ -1.07
SS18-222ENST00000582792 IFI27L1Q96BM0 104 aa8.38□□□□□ -1.07
SS18-222ENST00000582792 LPAP08519 4548 aa8.38□□□□□ -1.07
SS18-222ENST00000582792 IGLV5-45A0A087WSX0 123 aa8.37□□□□□ -1.07
SS18-222ENST00000582792 NUPR1O60356 82 aa8.37□□□□□ -1.07
SS18-222ENST00000582792 LEPROTL1O95214 131 aa8.37□□□□□ -1.07
SS18-222ENST00000582792 FAM19A2Q8N3H0 131 aa8.37□□□□□ -1.07
SS18-222ENST00000582792 CARD19Q96LW7 228 aa8.37□□□□□ -1.07
SS18-222ENST00000582792 GEMIN7Q9H840 131 aaKnown RBP8.37□□□□□ -1.07
SS18-222ENST00000582792 HSPB8Q9UJY1 196 aa8.37□□□□□ -1.07
SS18-222ENST00000582792 ZNF561-AS1K7EIQ3 104 aa8.36□□□□□ -1.07
SS18-222ENST00000582792 IGLC3P0DOY3 106 aa8.36□□□□□ -1.07
SS18-222ENST00000582792 LINC00526Q96FQ7 95 aa8.36□□□□□ -1.07
SS18-222ENST00000582792 C2orf48Q96LS8 159 aa8.36□□□□□ -1.07
SS18-222ENST00000582792 PTTG1IPP53801 180 aa8.34□□□□□ -1.07
SS18-222ENST00000582792 NDUFA6P56556 154 aa8.34□□□□□ -1.07
SS18-222ENST00000582792 ORAOV1Q8WV07 137 aa8.34□□□□□ -1.07
SS18-222ENST00000582792 CDKN2A-AS1Q9UH64 79 aa8.34□□□□□ -1.07
SS18-222ENST00000582792 IGLV4-69A0A075B6H9 119 aa8.33□□□□□ -1.08
SS18-222ENST00000582792 SPAG11BQ08648 103 aa8.33□□□□□ -1.08
SS18-222ENST00000582792 SYCNQ0VAF6 134 aa8.33□□□□□ -1.08
SS18-222ENST00000582792 LINC00469Q8N7U9 141 aa8.33□□□□□ -1.08
SS18-222ENST00000582792 CHTOPQ9Y3Y2 248 aaKnown RBP8.33□□□□□ -1.08
SS18-222ENST00000582792 H3BRM9 83 aa8.32□□□□□ -1.08
SS18-222ENST00000582792 KIAA0087Q14695 138 aa8.32□□□□□ -1.08
SS18-222ENST00000582792 RNF151Q2KHN1 245 aa8.32□□□□□ -1.08
SS18-222ENST00000582792 LOC107984640A0A0U1RRK4 108 aa8.31□□□□□ -1.08
SS18-222ENST00000582792 F8VRH5 84 aa8.31□□□□□ -1.08
SS18-222ENST00000582792 Q8IZM0 81 aa8.31□□□□□ -1.08
SS18-222ENST00000582792 A0A1W2PNN7 141 aa8.3□□□□□ -1.08
SS18-222ENST00000582792 SMIM1B2RUZ4 78 aa8.3□□□□□ -1.08
SS18-222ENST00000582792 FABP4P15090 132 aa8.3□□□□□ -1.08
SS18-222ENST00000582792 ZNF22P17026 224 aaPredicted RBP8.3□□□□□ -1.08
SS18-222ENST00000582792 GAGE2BQ13066 116 aa8.3□□□□□ -1.08
SS18-222ENST00000582792 CAMK2N2Q96S95 79 aa8.3□□□□□ -1.08
SS18-222ENST00000582792 MAP1LC3CQ9BXW4 147 aa8.3□□□□□ -1.08
SS18-222ENST00000582792 MRPL35Q9NZE8 188 aaKnown RBP8.3□□□□□ -1.08
SS18-222ENST00000582792 PSORS1C2Q9UIG4 136 aa8.3□□□□□ -1.08
SS18-222ENST00000582792 C11orf86A6NJI1 115 aa8.29□□□□□ -1.08
SS18-222ENST00000582792 NDUFA1O15239 70 aa8.29□□□□□ -1.08
SS18-222ENST00000582792 IGLV5-39A0A0G2JS06 123 aa8.28□□□□□ -1.08
SS18-222ENST00000582792 PRSS2P07478 247 aa8.28□□□□□ -1.08
SS18-222ENST00000582792 CXCL5P42830 114 aa8.28□□□□□ -1.08
SS18-222ENST00000582792 C9orf116Q5BN46 136 aaPredicted RBP8.27□□□□□ -1.09
SS18-222ENST00000582792 C6orf226Q5I0X4 101 aa8.27□□□□□ -1.09
SS18-222ENST00000582792 TRBV30A0A0K0K1B3 111 aa8.26□□□□□ -1.09
SS18-222ENST00000582792 SPINK8P0C7L1 97 aa8.26□□□□□ -1.09
SS18-222ENST00000582792 PLNP26678 52 aa8.26□□□□□ -1.09
SS18-222ENST00000582792 C1orf137Q5JT78 98 aa8.26□□□□□ -1.09
SS18-222ENST00000582792 TMEM170BQ5T4T1 132 aa8.26□□□□□ -1.09
SS18-222ENST00000582792 PET117Q6UWS5 81 aa8.26□□□□□ -1.09
SS18-222ENST00000582792 MUC2Q02817 5179 aa8.26□□□□□ -1.09
SS18-222ENST00000582792 SYS1-DBNDD2H3BUS1 97 aa8.25□□□□□ -1.09
SS18-222ENST00000582792 S100A6P06703 90 aa8.25□□□□□ -1.09
SS18-222ENST00000582792 TLX1NBP0CAT3 122 aa8.25□□□□□ -1.09
SS18-222ENST00000582792 PRR26Q8N8Z3 221 aa8.25□□□□□ -1.09
SS18-222ENST00000582792 COX7B2Q8TF08 81 aa8.25□□□□□ -1.09
SS18-222ENST00000582792 KRTAP3-3Q9BYR6 98 aa8.25□□□□□ -1.09
SS18-222ENST00000582792 KRTAP3-2Q9BYR7 98 aa8.25□□□□□ -1.09
SS18-222ENST00000582792 TOMM7Q9P0U1 55 aa8.25□□□□□ -1.09
SS18-222ENST00000582792 TMEM223A0PJW6 202 aa8.24□□□□□ -1.09
SS18-222ENST00000582792 DPM2O94777 84 aa8.24□□□□□ -1.09
SS18-222ENST00000582792 CKS1BP61024 79 aa8.24□□□□□ -1.09
SS18-222ENST00000582792 SFTA2Q6UW10 78 aa8.24□□□□□ -1.09
SS18-222ENST00000582792 UNQ6190/PRO20217Q6UXQ8 127 aa8.24□□□□□ -1.09
SS18-222ENST00000582792 PHF5AQ7RTV0 110 aaKnown RBP8.24□□□□□ -1.09
SS18-222ENST00000582792 HIST3H2BBQ8N257 126 aa8.24□□□□□ -1.09
SS18-222ENST00000582792 H0Y8G0 127 aa8.23□□□□□ -1.09
SS18-222ENST00000582792 IGKCP01834 107 aa8.23□□□□□ -1.09
SS18-222ENST00000582792 RPL18AQ02543 176 aaKnown RBP8.23□□□□□ -1.09
SS18-222ENST00000582792 C10orf25Q5T742 122 aa8.23□□□□□ -1.09
SS18-222ENST00000582792 LINC01545Q5VT33 79 aa8.23□□□□□ -1.09
SS18-222ENST00000582792 DIRC1Q969H9 104 aa8.23□□□□□ -1.09
SS18-222ENST00000582792 C6orf48Q9UBA6 75 aa8.23□□□□□ -1.09
SS18-222ENST00000582792 C3orf79P0CE67 100 aa8.22□□□□□ -1.09
SS18-222ENST00000582792 AKR1D1P51857 326 aa8.22□□□□□ -1.09
SS18-222ENST00000582792 C2orf82Q6UX34 121 aa8.22□□□□□ -1.09
SS18-222ENST00000582792 IGLV7-43P04211 117 aa8.21□□□□□ -1.1
SS18-222ENST00000582792 S100A2P29034 98 aa8.21□□□□□ -1.1
SS18-222ENST00000582792 C5orf52A6NGY3 159 aa8.2□□□□□ -1.1
SS18-222ENST00000582792 H0Y9J4 135 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms