RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 UBE2WQ96B02 151 aa6.36□□□□□ -1.39
SS18-220ENST00000582092 A0A0U1RRA0 63 aa6.35□□□□□ -1.39
SS18-220ENST00000582092 A4D1N5 150 aa6.35□□□□□ -1.39
SS18-220ENST00000582092 GAGE12HA6NDE8 117 aa6.35□□□□□ -1.39
SS18-220ENST00000582092 IGLL5B9A064 214 aa6.35□□□□□ -1.39
SS18-220ENST00000582092 K7ERJ3 54 aa6.35□□□□□ -1.39
SS18-220ENST00000582092 SCGB1C2P0DMR2 95 aa6.35□□□□□ -1.39
SS18-220ENST00000582092 PSMB2P49721 201 aa6.35□□□□□ -1.39
SS18-220ENST00000582092 NPC2P61916 151 aa6.35□□□□□ -1.39
SS18-220ENST00000582092 UBE2V1Q13404 147 aa6.35□□□□□ -1.39
SS18-220ENST00000582092 Q1RN00 199 aa6.35□□□□□ -1.39
SS18-220ENST00000582092 ESRGQ1W209 222 aa6.35□□□□□ -1.39
SS18-220ENST00000582092 PRO1854Q9UHT4 67 aa6.35□□□□□ -1.39
SS18-220ENST00000582092 A0A1W2PPM0 123 aa6.34□□□□□ -1.39
SS18-220ENST00000582092 CXCL5P42830 114 aa6.34□□□□□ -1.39
SS18-220ENST00000582092 Q8IZM0 81 aa6.34□□□□□ -1.39
SS18-220ENST00000582092 NAA38Q9BRA0 125 aaKnown RBP6.34□□□□□ -1.39
SS18-220ENST00000582092 PGPEP1Q9NXJ5 209 aa6.34□□□□□ -1.39
SS18-220ENST00000582092 ERG28Q9UKR5 140 aa6.34□□□□□ -1.39
SS18-220ENST00000582092 LOC107984156A0A0G2JMH3 177 aa6.33□□□□□ -1.4
SS18-220ENST00000582092 WFDC10BQ8IUB3 73 aa6.33□□□□□ -1.4
SS18-220ENST00000582092 ARL17AQ8IVW1 177 aa6.33□□□□□ -1.4
SS18-220ENST00000582092 SPCS1Q9Y6A9 102 aa6.33□□□□□ -1.4
SS18-220ENST00000582092 HUWE1Q7Z6Z7 4374 aaKnown RBP6.33□□□□□ -1.4
SS18-220ENST00000582092 A0A0B4J2C4 111 aa6.32□□□□□ -1.4
SS18-220ENST00000582092 A0A1B0GWB2 263 aa6.32□□□□□ -1.4
SS18-220ENST00000582092 IBA57-AS1B1ANH7 110 aa6.32□□□□□ -1.4
SS18-220ENST00000582092 H7C2G1 150 aa6.32□□□□□ -1.4
SS18-220ENST00000582092 CFC1BP0CG36 223 aa6.32□□□□□ -1.4
SS18-220ENST00000582092 CFC1P0CG37 223 aa6.32□□□□□ -1.4
SS18-220ENST00000582092 ADAMTSL4-AS1Q5T5F5 129 aa6.32□□□□□ -1.4
SS18-220ENST00000582092 Q8N3U1 123 aa6.32□□□□□ -1.4
SS18-220ENST00000582092 C1orf43Q9BWL3 253 aa6.32□□□□□ -1.4
SS18-220ENST00000582092 PRR34Q9NV39 138 aa6.32□□□□□ -1.4
SS18-220ENST00000582092 LY6G6CO95867 125 aa6.31□□□□□ -1.4
SS18-220ENST00000582092 PFN2P35080 140 aa6.31□□□□□ -1.4
SS18-220ENST00000582092 LINC01556Q5JQF7 62 aa6.31□□□□□ -1.4
SS18-220ENST00000582092 ENHOQ6UWT2 76 aa6.31□□□□□ -1.4
SS18-220ENST00000582092 UBE2DNLQ8IWF7 75 aa6.31□□□□□ -1.4
SS18-220ENST00000582092 DAND5Q8N907 189 aa6.31□□□□□ -1.4
SS18-220ENST00000582092 LINC00308Q8TCZ7 52 aa6.31□□□□□ -1.4
SS18-220ENST00000582092 RMI2Q96E14 147 aa6.31□□□□□ -1.4
SS18-220ENST00000582092 IGKV2D-24A0A075B6R9 120 aa6.3□□□□□ -1.4
SS18-220ENST00000582092 ZNF561-AS1K7EIQ3 104 aa6.3□□□□□ -1.4
SS18-220ENST00000582092 K7EP34 96 aa6.3□□□□□ -1.4
SS18-220ENST00000582092 COX6CP09669 75 aa6.3□□□□□ -1.4
SS18-220ENST00000582092 FOXI1Q12951 378 aa6.3□□□□□ -1.4
SS18-220ENST00000582092 LITAFQ99732 161 aa6.3□□□□□ -1.4
SS18-220ENST00000582092 SPAG11BQ08648 103 aa6.29□□□□□ -1.4
SS18-220ENST00000582092 MIR7-3HGQ8N6C7 128 aa6.29□□□□□ -1.4
SS18-220ENST00000582092 LINC00476Q8WZB0 136 aa6.29□□□□□ -1.4
SS18-220ENST00000582092 TENM2Q9NT68 2774 aa6.29□□□□□ -1.4
SS18-220ENST00000582092 TSPAN13O95857 204 aa6.28□□□□□ -1.4
SS18-220ENST00000582092 COX17Q14061 63 aa6.28□□□□□ -1.4
SS18-220ENST00000582092 TRBV20-1A0A075B6N2 111 aa6.27□□□□□ -1.41
SS18-220ENST00000582092 TRAV13-2A0A0B4J235 113 aa6.27□□□□□ -1.41
SS18-220ENST00000582092 DNAH10OSP0CZ25 163 aa6.27□□□□□ -1.41
SS18-220ENST00000582092 C2orf82Q6UX34 121 aa6.27□□□□□ -1.41
SS18-220ENST00000582092 PPDPFQ9H3Y8 114 aa6.27□□□□□ -1.41
SS18-220ENST00000582092 Q9HAA7 133 aa6.27□□□□□ -1.41
SS18-220ENST00000582092 SND1-IT1Q9HBX3 110 aa6.27□□□□□ -1.41
SS18-220ENST00000582092 LINC00588Q9Y4M8 146 aa6.27□□□□□ -1.41
SS18-220ENST00000582092 RPL13AP40429 203 aaKnown RBP6.26□□□□□ -1.41
SS18-220ENST00000582092 F8WDY8 70 aa6.25□□□□□ -1.41
SS18-220ENST00000582092 OR13C6PQ8NH95 151 aa6.25□□□□□ -1.41
SS18-220ENST00000582092 CAMK2N2Q96S95 79 aa6.25□□□□□ -1.41
SS18-220ENST00000582092 KIAA0087Q14695 138 aa6.24□□□□□ -1.41
SS18-220ENST00000582092 TRBV30A0A0K0K1B3 111 aa6.23□□□□□ -1.41
SS18-220ENST00000582092 F8W1H4 67 aa6.23□□□□□ -1.41
SS18-220ENST00000582092 ATXN8Q156A1 80 aa6.23□□□□□ -1.41
SS18-220ENST00000582092 HIGD2BQ4VC39 106 aa6.23□□□□□ -1.41
SS18-220ENST00000582092 UNQ6190/PRO20217Q6UXQ8 127 aa6.23□□□□□ -1.41
SS18-220ENST00000582092 UPK3BQ9BT76 320 aa6.23□□□□□ -1.41
SS18-220ENST00000582092 APLNQ9ULZ1 77 aa6.23□□□□□ -1.41
SS18-220ENST00000582092 H3BMG7 143 aa6.22□□□□□ -1.41
SS18-220ENST00000582092 SOSTDC1Q6X4U4 206 aa6.22□□□□□ -1.41
SS18-220ENST00000582092 C6orf223Q8N319 242 aa6.22□□□□□ -1.41
SS18-220ENST00000582092 NTN5Q8WTR8 489 aaPredicted RBP6.22□□□□□ -1.41
SS18-220ENST00000582092 C2orf48Q96LS8 159 aa6.22□□□□□ -1.41
SS18-220ENST00000582092 PSCAO43653 123 aa6.21□□□□□ -1.42
SS18-220ENST00000582092 LINC00526Q96FQ7 95 aa6.21□□□□□ -1.42
SS18-220ENST00000582092 SNCGO76070 127 aa6.2□□□□□ -1.42
SS18-220ENST00000582092 TCL1BO95988 128 aa6.2□□□□□ -1.42
SS18-220ENST00000582092 C9orf116Q5BN46 136 aaPredicted RBP6.2□□□□□ -1.42
SS18-220ENST00000582092 S100A7L2Q5SY68 101 aa6.2□□□□□ -1.42
SS18-220ENST00000582092 GVQW2A0A096LPI5 108 aaPredicted RBP6.19□□□□□ -1.42
SS18-220ENST00000582092 TRIAP1O43715 76 aa6.19□□□□□ -1.42
SS18-220ENST00000582092 EIF4EBP3O60516 100 aaPredicted RBP6.19□□□□□ -1.42
SS18-220ENST00000582092 NDUFC2O95298 119 aa6.19□□□□□ -1.42
SS18-220ENST00000582092 SYCNQ0VAF6 134 aa6.19□□□□□ -1.42
SS18-220ENST00000582092 TTC32Q5I0X7 151 aa6.19□□□□□ -1.42
SS18-220ENST00000582092 DNAH7Q8WXX0 4024 aa6.19□□□□□ -1.42
SS18-220ENST00000582092 C10orf25Q5T742 122 aa6.18□□□□□ -1.42
SS18-220ENST00000582092 KMT2CQ8NEZ4 4911 aaKnown RBP6.18□□□□□ -1.42
SS18-220ENST00000582092 CSMD3Q7Z407 3707 aa6.17□□□□□ -1.42
SS18-220ENST00000582092 J3QR89 54 aa6.17□□□□□ -1.42
SS18-220ENST00000582092 KRTAP26-1Q6PEX3 210 aa6.17□□□□□ -1.42
SS18-220ENST00000582092 C15orf56Q8N910 161 aa6.17□□□□□ -1.42
SS18-220ENST00000582092 CARD19Q96LW7 228 aa6.17□□□□□ -1.42
SS18-220ENST00000582092 TMEM126AQ9H061 195 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms