RNA–Protein interactions for RNA: ENST00000581055.1

TOP2A-205, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 4

Gene TOP2A, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-205ENST00000581055 SERF1AO75920 110 aa11.49□□□□□ -0.57
TOP2A-205ENST00000581055 RPL18AQ02543 176 aaKnown RBP11.49□□□□□ -0.57
TOP2A-205ENST00000581055 IFI27L1Q96BM0 104 aa11.49□□□□□ -0.57
TOP2A-205ENST00000581055 C6orf48Q9UBA6 75 aa11.49□□□□□ -0.57
TOP2A-205ENST00000581055 PCLOQ9Y6V0 5065 aa11.49□□□□□ -0.57
TOP2A-205ENST00000581055 SMIM1B2RUZ4 78 aa11.48□□□□□ -0.57
TOP2A-205ENST00000581055 C2orf82Q6UX34 121 aa11.48□□□□□ -0.57
TOP2A-205ENST00000581055 FAM19A2Q8N3H0 131 aa11.48□□□□□ -0.57
TOP2A-205ENST00000581055 TLX1NBP0CAT3 122 aa11.47□□□□□ -0.57
TOP2A-205ENST00000581055 CXCL5P42830 114 aa11.47□□□□□ -0.57
TOP2A-205ENST00000581055 ABCA13Q86UQ4 5058 aa11.47□□□□□ -0.57
TOP2A-205ENST00000581055 FAT1Q14517 4588 aa11.47□□□□□ -0.57
TOP2A-205ENST00000581055 TRAV12-1A0A0B4J245 112 aa11.46□□□□□ -0.57
TOP2A-205ENST00000581055 INAFM2P0DMQ5 153 aa11.46□□□□□ -0.57
TOP2A-205ENST00000581055 CHTOPQ9Y3Y2 248 aaKnown RBP11.46□□□□□ -0.57
TOP2A-205ENST00000581055 SPINK8P0C7L1 97 aa11.45□□□□□ -0.58
TOP2A-205ENST00000581055 S100A1P23297 94 aa11.45□□□□□ -0.58
TOP2A-205ENST00000581055 COX7B2Q8TF08 81 aa11.45□□□□□ -0.58
TOP2A-205ENST00000581055 C7orf33Q8WU49 177 aa11.45□□□□□ -0.58
TOP2A-205ENST00000581055 F8VRH5 84 aa11.44□□□□□ -0.58
TOP2A-205ENST00000581055 LEPROTL1O95214 131 aa11.44□□□□□ -0.58
TOP2A-205ENST00000581055 LINC00310P59036 64 aa11.44□□□□□ -0.58
TOP2A-205ENST00000581055 RPL37AP61513 92 aaKnown RBP11.44□□□□□ -0.58
TOP2A-205ENST00000581055 ZNF22P17026 224 aaPredicted RBP11.43□□□□□ -0.58
TOP2A-205ENST00000581055 HSPB8Q9UJY1 196 aa11.43□□□□□ -0.58
TOP2A-205ENST00000581055 SRRM2Q9UQ35 2752 aaKnown RBP11.42□□□□□ -0.58
TOP2A-205ENST00000581055 C11orf86A6NJI1 115 aa11.42□□□□□ -0.58
TOP2A-205ENST00000581055 NDUFC2-KCTD14E9PQ53 114 aa11.42□□□□□ -0.58
TOP2A-205ENST00000581055 TMEM170BQ5T4T1 132 aa11.42□□□□□ -0.58
TOP2A-205ENST00000581055 Q6ZRP5 223 aa11.42□□□□□ -0.58
TOP2A-205ENST00000581055 HIST1H2BKO60814 126 aa11.41□□□□□ -0.58
TOP2A-205ENST00000581055 HIST1H2BJP06899 126 aa11.41□□□□□ -0.58
TOP2A-205ENST00000581055 HIST1H2BOP23527 126 aa11.41□□□□□ -0.58
TOP2A-205ENST00000581055 HIST1H2BBP33778 126 aa11.41□□□□□ -0.58
TOP2A-205ENST00000581055 HIST1H2BDP58876 126 aa11.41□□□□□ -0.58
TOP2A-205ENST00000581055 HIST1H2BCP62807 126 aa11.41□□□□□ -0.58
TOP2A-205ENST00000581055 HIST2H2BEQ16778 126 aa11.41□□□□□ -0.58
TOP2A-205ENST00000581055 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.41□□□□□ -0.58
TOP2A-205ENST00000581055 HIST1H2BHQ93079 126 aa11.41□□□□□ -0.58
TOP2A-205ENST00000581055 HIST1H2BNQ99877 126 aa11.41□□□□□ -0.58
TOP2A-205ENST00000581055 HIST1H2BMQ99879 126 aa11.41□□□□□ -0.58
TOP2A-205ENST00000581055 IGLV5-39A0A0G2JS06 123 aa11.4□□□□□ -0.58
TOP2A-205ENST00000581055 NUPR1O60356 82 aa11.4□□□□□ -0.58
TOP2A-205ENST00000581055 GAGE2EQ4V326 116 aa11.4□□□□□ -0.58
TOP2A-205ENST00000581055 C9orf116Q5BN46 136 aaPredicted RBP11.4□□□□□ -0.58
TOP2A-205ENST00000581055 GAGE2DQ9UEU5 116 aa11.4□□□□□ -0.58
TOP2A-205ENST00000581055 FABP4P15090 132 aa11.38□□□□□ -0.59
TOP2A-205ENST00000581055 VPS13BQ7Z7G8 4022 aa11.38□□□□□ -0.59
TOP2A-205ENST00000581055 A0A1W2PNN7 141 aa11.37□□□□□ -0.59
TOP2A-205ENST00000581055 H0Y8G0 127 aa11.37□□□□□ -0.59
TOP2A-205ENST00000581055 ATP6V1G1O75348 118 aa11.37□□□□□ -0.59
TOP2A-205ENST00000581055 KRTAP10-4P60372 401 aaPredicted RBP11.37□□□□□ -0.59
TOP2A-205ENST00000581055 SFTA2Q6UW10 78 aa11.36□□□□□ -0.59
TOP2A-205ENST00000581055 ODF1Q14990 250 aa11.35□□□□□ -0.59
TOP2A-205ENST00000581055 MAP1LC3CQ9BXW4 147 aa11.35□□□□□ -0.59
TOP2A-205ENST00000581055 TMEM223A0PJW6 202 aa11.34□□□□□ -0.59
TOP2A-205ENST00000581055 PLNP26678 52 aa11.34□□□□□ -0.59
TOP2A-205ENST00000581055 FAM168BA1KXE4 195 aa11.31□□□□□ -0.6
TOP2A-205ENST00000581055 C9orf129Q5T035 196 aaKnown RBP11.31□□□□□ -0.6
TOP2A-205ENST00000581055 FAM19A5Q7Z5A7 132 aaPredicted RBP11.31□□□□□ -0.6
TOP2A-205ENST00000581055 DPM2O94777 84 aa11.3□□□□□ -0.6
TOP2A-205ENST00000581055 PRR3P79522 188 aaKnown RBP11.3□□□□□ -0.6
TOP2A-205ENST00000581055 COA6Q5JTJ3 125 aaKnown RBP11.3□□□□□ -0.6
TOP2A-205ENST00000581055 XAGE1AQ9HD64 81 aa11.3□□□□□ -0.6
TOP2A-205ENST00000581055 COX17Q14061 63 aa11.28□□□□□ -0.6
TOP2A-205ENST00000581055 PHF5AQ7RTV0 110 aaKnown RBP11.28□□□□□ -0.6
TOP2A-205ENST00000581055 M0QXV9 152 aa11.27□□□□□ -0.61
TOP2A-205ENST00000581055 IGKCP01834 107 aa11.27□□□□□ -0.61
TOP2A-205ENST00000581055 ZNF625Q96I27 306 aaPredicted RBP11.27□□□□□ -0.61
TOP2A-205ENST00000581055 ERG28Q9UKR5 140 aa11.27□□□□□ -0.61
TOP2A-205ENST00000581055 SYS1-DBNDD2H3BUS1 97 aa11.26□□□□□ -0.61
TOP2A-205ENST00000581055 PFN2P35080 140 aa11.26□□□□□ -0.61
TOP2A-205ENST00000581055 HERVK_113P61574 105 aa11.26□□□□□ -0.61
TOP2A-205ENST00000581055 PMCHL2Q9BQD1 86 aa11.25□□□□□ -0.61
TOP2A-205ENST00000581055 LBHQ53QV2 105 aaPredicted RBP11.24□□□□□ -0.61
TOP2A-205ENST00000581055 KRTAP7-1Q8IUC3 87 aa11.24□□□□□ -0.61
TOP2A-205ENST00000581055 HNRNPA3P51991 378 aaKnown RBP11.23□□□□□ -0.61
TOP2A-205ENST00000581055 HERV-K104P63124 156 aa11.23□□□□□ -0.61
TOP2A-205ENST00000581055 UBE2BP63146 152 aa11.23□□□□□ -0.61
TOP2A-205ENST00000581055 SERTAD4-AS1Q5TG53 156 aa11.23□□□□□ -0.61
TOP2A-205ENST00000581055 PET117Q6UWS5 81 aa11.23□□□□□ -0.61
TOP2A-205ENST00000581055 PLEKHB2Q96CS7 222 aa11.23□□□□□ -0.61
TOP2A-205ENST00000581055 LEPROTO15243 131 aa11.22□□□□□ -0.61
TOP2A-205ENST00000581055 PSORS1C2Q9UIG4 136 aa11.22□□□□□ -0.61
TOP2A-205ENST00000581055 PLA2G2DQ9UNK4 145 aa11.22□□□□□ -0.61
TOP2A-205ENST00000581055 C22orf24Q9Y442 160 aa11.22□□□□□ -0.61
TOP2A-205ENST00000581055 FLG2Q5D862 2391 aaPredicted RBP11.21□□□□□ -0.61
TOP2A-205ENST00000581055 MYMXA0A1B0GTQ4 84 aa11.21□□□□□ -0.61
TOP2A-205ENST00000581055 LINC00587B1AMM8 73 aa11.21□□□□□ -0.61
TOP2A-205ENST00000581055 TP73-AS1Q9UF72 201 aa11.21□□□□□ -0.61
TOP2A-205ENST00000581055 NDUFA12Q9UI09 145 aa11.21□□□□□ -0.61
TOP2A-205ENST00000581055 LINC00158P58513 81 aa11.2□□□□□ -0.62
TOP2A-205ENST00000581055 SND1-IT1Q9HBX3 110 aa11.2□□□□□ -0.62
TOP2A-205ENST00000581055 KRTAP29-1A8MX34 341 aaPredicted RBP11.19□□□□□ -0.62
TOP2A-205ENST00000581055 OXTP01178 125 aa11.19□□□□□ -0.62
TOP2A-205ENST00000581055 C1orf137Q5JT78 98 aa11.19□□□□□ -0.62
TOP2A-205ENST00000581055 LINC01545Q5VT33 79 aa11.19□□□□□ -0.62
TOP2A-205ENST00000581055 J3QL48 77 aa11.18□□□□□ -0.62
TOP2A-205ENST00000581055 J3QQQ9 107 aa11.18□□□□□ -0.62
TOP2A-205ENST00000581055 KRTDAPP60985 99 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms