RNA–Protein interactions for RNA: ENST00000581002.1

BRD2-216, Transcript of bromodomain containing 2, humanhuman

TSL 4

Gene BRD2, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD2-216ENST00000581002 SCGB3A1Q96QR1 104 aa12.23□□□□□ -0.45
BRD2-216ENST00000581002 TIMM17AQ99595 171 aa12.23□□□□□ -0.45
BRD2-216ENST00000581002 FAM19A3Q7Z5A8 133 aa12.22□□□□□ -0.45
BRD2-216ENST00000581002 PRR26Q8N8Z3 221 aa12.22□□□□□ -0.45
BRD2-216ENST00000581002 TMEM218A2RU14 115 aa12.21□□□□□ -0.45
BRD2-216ENST00000581002 S100PP25815 95 aa12.21□□□□□ -0.45
BRD2-216ENST00000581002 UQCC3Q6UW78 93 aa12.21□□□□□ -0.45
BRD2-216ENST00000581002 TRAV9-1A0A075B6T8 112 aa12.2□□□□□ -0.46
BRD2-216ENST00000581002 ADCYAP1P18509 176 aa12.2□□□□□ -0.46
BRD2-216ENST00000581002 ERASQ7Z444 233 aa12.2□□□□□ -0.46
BRD2-216ENST00000581002 XAGE1AQ9HD64 81 aa12.2□□□□□ -0.46
BRD2-216ENST00000581002 F8VRH5 84 aa12.19□□□□□ -0.46
BRD2-216ENST00000581002 C22orf24Q9Y442 160 aa12.17□□□□□ -0.46
BRD2-216ENST00000581002 CXCL5P42830 114 aa12.16□□□□□ -0.46
BRD2-216ENST00000581002 LBHQ53QV2 105 aaPredicted RBP12.16□□□□□ -0.46
BRD2-216ENST00000581002 GNB1LQ9BYB4 327 aa12.16□□□□□ -0.46
BRD2-216ENST00000581002 SMCO4Q9NRQ5 59 aa12.15□□□□□ -0.46
BRD2-216ENST00000581002 TINCRA0A1B0GVN0 87 aa12.14□□□□□ -0.47
BRD2-216ENST00000581002 LINC01549A6NIU2 74 aa12.14□□□□□ -0.47
BRD2-216ENST00000581002 FA2HQ7L5A8 372 aa12.14□□□□□ -0.47
BRD2-216ENST00000581002 SEC11CQ9BY50 192 aa12.14□□□□□ -0.47
BRD2-216ENST00000581002 IGLV1-50A0A075B6I6 118 aa12.13□□□□□ -0.47
BRD2-216ENST00000581002 COX7B2Q8TF08 81 aa12.13□□□□□ -0.47
BRD2-216ENST00000581002 SMIM1B2RUZ4 78 aa12.12□□□□□ -0.47
BRD2-216ENST00000581002 NUPR1O60356 82 aa12.12□□□□□ -0.47
BRD2-216ENST00000581002 FABP9Q0Z7S8 132 aa12.12□□□□□ -0.47
BRD2-216ENST00000581002 PDZD11Q5EBL8 140 aa12.12□□□□□ -0.47
BRD2-216ENST00000581002 CST9LQ9H4G1 147 aa12.12□□□□□ -0.47
BRD2-216ENST00000581002 IFITM2Q01629 132 aa12.11□□□□□ -0.47
BRD2-216ENST00000581002 COX19Q49B96 90 aa12.11□□□□□ -0.47
BRD2-216ENST00000581002 MRPL18Q9H0U6 180 aaKnown RBP12.11□□□□□ -0.47
BRD2-216ENST00000581002 RNF213Q63HN8 5207 aa12.11□□□□□ -0.47
BRD2-216ENST00000581002 ZNF861PO60384 105 aa12.1□□□□□ -0.47
BRD2-216ENST00000581002 KRTAP1-4P0C5Y4 121 aa12.1□□□□□ -0.47
BRD2-216ENST00000581002 SPINK8P0C7L1 97 aa12.1□□□□□ -0.47
BRD2-216ENST00000581002 PMVKQ15126 192 aa12.1□□□□□ -0.47
BRD2-216ENST00000581002 MRPL55Q7Z7F7 128 aaKnown RBP12.1□□□□□ -0.47
BRD2-216ENST00000581002 COMMD7Q86VX2 200 aa12.1□□□□□ -0.47
BRD2-216ENST00000581002 RAB5BP61020 215 aa12.09□□□□□ -0.47
BRD2-216ENST00000581002 LINC01546A6NGU7 62 aa12.08□□□□□ -0.48
BRD2-216ENST00000581002 RPL13AP40429 203 aaKnown RBP12.08□□□□□ -0.48
BRD2-216ENST00000581002 RPS10P5Q9NQ39 176 aa12.08□□□□□ -0.48
BRD2-216ENST00000581002 TP73-AS1Q9UF72 201 aa12.08□□□□□ -0.48
BRD2-216ENST00000581002 IGLV5-45A0A087WSX0 123 aa12.07□□□□□ -0.48
BRD2-216ENST00000581002 H3BRM9 83 aa12.07□□□□□ -0.48
BRD2-216ENST00000581002 NDUFA6P56556 154 aa12.07□□□□□ -0.48
BRD2-216ENST00000581002 RPL37AP8A6NKH3 93 aa12.06□□□□□ -0.48
BRD2-216ENST00000581002 GAGE10A6NGK3 116 aa12.04□□□□□ -0.48
BRD2-216ENST00000581002 BCE1O60756 84 aa12.04□□□□□ -0.48
BRD2-216ENST00000581002 ATP5LO75964 103 aa12.04□□□□□ -0.48
BRD2-216ENST00000581002 RPL28P46779 137 aaKnown RBP12.04□□□□□ -0.48
BRD2-216ENST00000581002 RHEBQ15382 184 aa12.04□□□□□ -0.48
BRD2-216ENST00000581002 LINC00167Q96N53 147 aa12.04□□□□□ -0.48
BRD2-216ENST00000581002 CARHSP1Q9Y2V2 147 aaKnown RBP12.04□□□□□ -0.48
BRD2-216ENST00000581002 NKAPP1Q8N9T2 125 aa12.03□□□□□ -0.48
BRD2-216ENST00000581002 LPAP08519 4548 aa12.02□□□□□ -0.49
BRD2-216ENST00000581002 TRAPPC1Q9Y5R8 145 aa12.01□□□□□ -0.49
BRD2-216ENST00000581002 PFN2P35080 140 aa12□□□□□ -0.49
BRD2-216ENST00000581002 PRR4Q16378 134 aa12□□□□□ -0.49
BRD2-216ENST00000581002 LINC00614P0C842 121 aa11.99□□□□□ -0.49
BRD2-216ENST00000581002 C10orf91Q5T1B1 145 aa11.99□□□□□ -0.49
BRD2-216ENST00000581002 IGLC3P0DOY3 106 aa11.98□□□□□ -0.49
BRD2-216ENST00000581002 HBDP02042 147 aa11.97□□□□□ -0.49
BRD2-216ENST00000581002 UBE2AP49459 152 aa11.97□□□□□ -0.49
BRD2-216ENST00000581002 PMCHL1Q16048 86 aa11.96□□□□□ -0.49
BRD2-216ENST00000581002 C18orf32Q8TCD1 76 aa11.96□□□□□ -0.49
BRD2-216ENST00000581002 IGLV5-37A0A075B6J1 123 aa11.95□□□□□ -0.5
BRD2-216ENST00000581002 A0A096LNJ9 63 aa11.95□□□□□ -0.5
BRD2-216ENST00000581002 TSPAN13O95857 204 aa11.95□□□□□ -0.5
BRD2-216ENST00000581002 ZNF22P17026 224 aaPredicted RBP11.95□□□□□ -0.5
BRD2-216ENST00000581002 IGKV2-28A0A075B6P5 120 aa11.94□□□□□ -0.5
BRD2-216ENST00000581002 SCO1O75880 301 aa11.94□□□□□ -0.5
BRD2-216ENST00000581002 IGKV2D-28P01615 120 aa11.94□□□□□ -0.5
BRD2-216ENST00000581002 CRYGAP11844 174 aa11.94□□□□□ -0.5
BRD2-216ENST00000581002 IGLV5-39A0A0G2JS06 123 aa11.93□□□□□ -0.5
BRD2-216ENST00000581002 TMEM170BQ5T4T1 132 aa11.93□□□□□ -0.5
BRD2-216ENST00000581002 BAGE3Q86Y29 109 aa11.93□□□□□ -0.5
BRD2-216ENST00000581002 TYMSOSQ8TAI1 123 aa11.93□□□□□ -0.5
BRD2-216ENST00000581002 URB1-AS1Q96HZ7 61 aa11.93□□□□□ -0.5
BRD2-216ENST00000581002 ZNF625Q96I27 306 aaPredicted RBP11.93□□□□□ -0.5
BRD2-216ENST00000581002 ERG28Q9UKR5 140 aa11.93□□□□□ -0.5
BRD2-216ENST00000581002 A0A087X002 238 aa11.92□□□□□ -0.5
BRD2-216ENST00000581002 APOC3P02656 99 aa11.92□□□□□ -0.5
BRD2-216ENST00000581002 SND1-IT1Q9HBX3 110 aa11.91□□□□□ -0.5
BRD2-216ENST00000581002 RPL24P83731 157 aaKnown RBP11.9□□□□□ -0.5
BRD2-216ENST00000581002 NDUFA5Q16718 116 aa11.9□□□□□ -0.5
BRD2-216ENST00000581002 ANAPC11Q9NYG5 84 aa11.9□□□□□ -0.5
BRD2-216ENST00000581002 C11orf86A6NJI1 115 aa11.89□□□□□ -0.51
BRD2-216ENST00000581002 COX17Q14061 63 aa11.89□□□□□ -0.51
BRD2-216ENST00000581002 SNAPINO95295 136 aa11.88□□□□□ -0.51
BRD2-216ENST00000581002 SFTA2Q6UW10 78 aa11.87□□□□□ -0.51
BRD2-216ENST00000581002 FAM19A1Q7Z5A9 133 aa11.87□□□□□ -0.51
BRD2-216ENST00000581002 SVBPQ8N300 66 aa11.87□□□□□ -0.51
BRD2-216ENST00000581002 CHTOPQ9Y3Y2 248 aaKnown RBP11.87□□□□□ -0.51
BRD2-216ENST00000581002 VPREB1P12018 145 aa11.86□□□□□ -0.51
BRD2-216ENST00000581002 KRTAP13-1Q8IUC0 172 aa11.86□□□□□ -0.51
BRD2-216ENST00000581002 PRLHP81277 87 aa11.85□□□□□ -0.51
BRD2-216ENST00000581002 TMEM238C9JI98 176 aa11.84□□□□□ -0.51
BRD2-216ENST00000581002 LINC00158P58513 81 aa11.84□□□□□ -0.51
BRD2-216ENST00000581002 TMEM126AQ9H061 195 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 124.3 ms