RNA–Protein interactions for RNA: ENST00000579081.5

NF1-219, Transcript of neurofibromin 1, humanhuman

TSL 1 (best)

Gene NF1, Length 8,788 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-219ENST00000579081 SMIM11BQ8TCY0 68 aa3.75□□□□□ -1.81
NF1-219ENST00000579081 M0QY20 66 aa3.75□□□□□ -1.81
NF1-219ENST00000579081 IGLV2-8P01709 118 aa3.75□□□□□ -1.81
NF1-219ENST00000579081 KLK9Q2XQG4 91 aa3.75□□□□□ -1.81
NF1-219ENST00000579081 COL4A1P02462 1669 aa3.75□□□□□ -1.81
NF1-219ENST00000579081 IGLV2-14P01704 120 aa3.75□□□□□ -1.81
NF1-219ENST00000579081 REG3GQ6UW15 175 aa3.75□□□□□ -1.81
NF1-219ENST00000579081 C1orf137Q5JT78 98 aa3.75□□□□□ -1.81
NF1-219ENST00000579081 A0A1B0GUV1 79 aa3.75□□□□□ -1.81
NF1-219ENST00000579081 PLA2G5P39877 138 aa3.75□□□□□ -1.81
NF1-219ENST00000579081 H3BS24 57 aa3.74□□□□□ -1.81
NF1-219ENST00000579081 FRMD6-AS1P0C7T7 363 aa3.74□□□□□ -1.81
NF1-219ENST00000579081 LINC01556Q5JQF7 62 aa3.74□□□□□ -1.81
NF1-219ENST00000579081 TTC28Q96AY4 2481 aa3.74□□□□□ -1.81
NF1-219ENST00000579081 A8MZ25 164 aa3.74□□□□□ -1.81
NF1-219ENST00000579081 C8orf87E5RJ46 101 aa3.74□□□□□ -1.81
NF1-219ENST00000579081 IGLV2-11P01706 119 aa3.74□□□□□ -1.81
NF1-219ENST00000579081 SOSTDC1Q6X4U4 206 aa3.74□□□□□ -1.81
NF1-219ENST00000579081 SPATA3Q8NHX4 192 aa3.74□□□□□ -1.81
NF1-219ENST00000579081 C2orf48Q96LS8 159 aa3.74□□□□□ -1.81
NF1-219ENST00000579081 COL4A2P08572 1712 aa3.74□□□□□ -1.81
NF1-219ENST00000579081 GPR179Q6PRD1 2367 aa3.74□□□□□ -1.81
NF1-219ENST00000579081 IGLV5-45A0A087WSX0 123 aa3.74□□□□□ -1.81
NF1-219ENST00000579081 PSMG3-AS1Q96PY0 264 aa3.74□□□□□ -1.81
NF1-219ENST00000579081 C6orf223Q8N319 242 aa3.74□□□□□ -1.81
NF1-219ENST00000579081 CYSRT1A8MQ03 144 aa3.73□□□□□ -1.81
NF1-219ENST00000579081 NTM-AS1Q6ZSK4 140 aa3.73□□□□□ -1.81
NF1-219ENST00000579081 MAPKAPK5-AS1Q8N8E1 139 aa3.73□□□□□ -1.81
NF1-219ENST00000579081 EGFEM1PQ0D2K5 195 aa3.73□□□□□ -1.81
NF1-219ENST00000579081 C1orf134Q5TEV5 83 aa3.73□□□□□ -1.81
NF1-219ENST00000579081 ZNF702PQ9H963 129 aa3.73□□□□□ -1.81
NF1-219ENST00000579081 PTPN13Q12923 2485 aa3.73□□□□□ -1.81
NF1-219ENST00000579081 LINC01547P58512 204 aaPredicted RBP3.73□□□□□ -1.81
NF1-219ENST00000579081 LINC01006Q8NI28 216 aa3.73□□□□□ -1.81
NF1-219ENST00000579081 Q9BRP9 147 aa3.73□□□□□ -1.81
NF1-219ENST00000579081 TSHBP01222 138 aa3.72□□□□□ -1.81
NF1-219ENST00000579081 GDF5OSQ5U4N7 250 aa3.72□□□□□ -1.81
NF1-219ENST00000579081 H0Y9P7 68 aa3.72□□□□□ -1.81
NF1-219ENST00000579081 Q8N2B8 174 aa3.72□□□□□ -1.81
NF1-219ENST00000579081 KLLNB2CW77 178 aa3.72□□□□□ -1.81
NF1-219ENST00000579081 POLR2KP53803 58 aaKnown RBP3.72□□□□□ -1.81
NF1-219ENST00000579081 XGP55808 180 aa3.72□□□□□ -1.81
NF1-219ENST00000579081 C10orf99Q6UWK7 81 aa3.72□□□□□ -1.81
NF1-219ENST00000579081 MOBPQ13875 183 aa3.72□□□□□ -1.81
NF1-219ENST00000579081 RNASE3P12724 160 aaKnown RBP3.72□□□□□ -1.81
NF1-219ENST00000579081 PRLHP81277 87 aa3.71□□□□□ -1.82
NF1-219ENST00000579081 Q8NA96 180 aa3.71□□□□□ -1.82
NF1-219ENST00000579081 MSMPQ1L6U9 139 aa3.71□□□□□ -1.82
NF1-219ENST00000579081 UNQ6190/PRO20217Q6UXQ8 127 aa3.71□□□□□ -1.82
NF1-219ENST00000579081 C7orf65Q6ZTY9 151 aa3.7□□□□□ -1.82
NF1-219ENST00000579081 KTN1-AS1Q86SY8 53 aa3.7□□□□□ -1.82
NF1-219ENST00000579081 A0A087WSZ3 146 aa3.7□□□□□ -1.82
NF1-219ENST00000579081 IGKV2D-30A0A075B6S6 120 aa3.7□□□□□ -1.82
NF1-219ENST00000579081 LOC101927531A0A1B0GV80 90 aa3.7□□□□□ -1.82
NF1-219ENST00000579081 IGKV2-30P06310 120 aa3.7□□□□□ -1.82
NF1-219ENST00000579081 PSPHP1O15172 72 aa3.7□□□□□ -1.82
NF1-219ENST00000579081 EDN2P20800 178 aa3.7□□□□□ -1.82
NF1-219ENST00000579081 CDC42SE2Q9NRR3 84 aa3.69□□□□□ -1.82
NF1-219ENST00000579081 LRRK2Q5S007 2527 aa3.69□□□□□ -1.82
NF1-219ENST00000579081 LINC00694P0DN24 101 aa3.69□□□□□ -1.82
NF1-219ENST00000579081 AVPP01185 164 aa3.69□□□□□ -1.82
NF1-219ENST00000579081 C18orf65Q6ZTR6 163 aa3.69□□□□□ -1.82
NF1-219ENST00000579081 DOPEY1Q5JWR5 2465 aa3.69□□□□□ -1.82
NF1-219ENST00000579081 USP9XQ93008 2570 aaPredicted RBP3.69□□□□□ -1.82
NF1-219ENST00000579081 Q8N814 137 aa3.69□□□□□ -1.82
NF1-219ENST00000579081 H3BNG1 76 aa3.68□□□□□ -1.82
NF1-219ENST00000579081 IGLV5-39A0A0G2JS06 123 aa3.68□□□□□ -1.82
NF1-219ENST00000579081 A0A1B0GU69 56 aa3.68□□□□□ -1.82
NF1-219ENST00000579081 DEFB116Q30KQ4 102 aa3.68□□□□□ -1.82
NF1-219ENST00000579081 PKD1L2Q7Z442 2459 aa3.68□□□□□ -1.82
NF1-219ENST00000579081 CRIP1P50238 77 aa3.68□□□□□ -1.82
NF1-219ENST00000579081 C11orf72Q8NBR9 251 aa3.68□□□□□ -1.82
NF1-219ENST00000579081 WISP2O76076 250 aa3.68□□□□□ -1.82
NF1-219ENST00000579081 TNP2Q05952 138 aa3.67□□□□□ -1.82
NF1-219ENST00000579081 LINC00575Q6W349 94 aa3.67□□□□□ -1.82
NF1-219ENST00000579081 C9orf116Q5BN46 136 aaPredicted RBP3.67□□□□□ -1.82
NF1-219ENST00000579081 Q1T7F1 81 aa3.67□□□□□ -1.82
NF1-219ENST00000579081 Q8N6K4 173 aa3.67□□□□□ -1.82
NF1-219ENST00000579081 SPTBN4Q9H254 2564 aa3.67□□□□□ -1.82
NF1-219ENST00000579081 IGIPA6NJ69 53 aa3.67□□□□□ -1.82
NF1-219ENST00000579081 COX6A2Q02221 97 aa3.67□□□□□ -1.82
NF1-219ENST00000579081 A0A087WVE0 104 aa3.67□□□□□ -1.82
NF1-219ENST00000579081 SPAG11AQ6PDA7 123 aa3.67□□□□□ -1.82
NF1-219ENST00000579081 POLQO75417 2590 aa3.67□□□□□ -1.82
NF1-219ENST00000579081 SPINT4Q6UDR6 99 aa3.67□□□□□ -1.82
NF1-219ENST00000579081 Q6ZS46 218 aa3.67□□□□□ -1.82
NF1-219ENST00000579081 LCA10Q71F78 164 aa3.66□□□□□ -1.82
NF1-219ENST00000579081 Q8N3U1 123 aa3.66□□□□□ -1.82
NF1-219ENST00000579081 GVQW2A0A096LPI5 108 aaPredicted RBP3.66□□□□□ -1.82
NF1-219ENST00000579081 Q6ZTC4 211 aa3.66□□□□□ -1.82
NF1-219ENST00000579081 C1orf64Q8NEQ6 169 aa3.66□□□□□ -1.82
NF1-219ENST00000579081 A0A1W2PNU3 283 aaPredicted RBP3.66□□□□□ -1.82
NF1-219ENST00000579081 ACYP2P14621 99 aa3.66□□□□□ -1.82
NF1-219ENST00000579081 A8MUN3 132 aa3.66□□□□□ -1.82
NF1-219ENST00000579081 C11orf71Q6IPW1 123 aa3.66□□□□□ -1.82
NF1-219ENST00000579081 SPACA4Q8TDM5 124 aa3.66□□□□□ -1.82
NF1-219ENST00000579081 CDIP1Q9H305 208 aa3.66□□□□□ -1.82
NF1-219ENST00000579081 LINC00242Q5T6M2 205 aa3.66□□□□□ -1.82
NF1-219ENST00000579081 PRR9Q5T870 116 aa3.66□□□□□ -1.82
NF1-219ENST00000579081 SMCR5Q8TEV8 140 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 136.9 ms