RNA–Protein interactions for RNA: ENST00000578172.1

NDEL1-204, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

Gene NDEL1, Length 3,927 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-204ENST00000578172 RNF152Q8N8N0 203 aa9.69□□□□□ -0.86
NDEL1-204ENST00000578172 WFDC9Q8NEX5 89 aa9.69□□□□□ -0.86
NDEL1-204ENST00000578172 COX7A2LO14548 114 aa9.69□□□□□ -0.86
NDEL1-204ENST00000578172 DSCR8Q96T75 97 aa9.69□□□□□ -0.86
NDEL1-204ENST00000578172 TRAV13-2A0A0B4J235 113 aa9.69□□□□□ -0.86
NDEL1-204ENST00000578172 ATOX1O00244 68 aa9.69□□□□□ -0.86
NDEL1-204ENST00000578172 C20orf197Q8N268 126 aa9.68□□□□□ -0.86
NDEL1-204ENST00000578172 MGAM2Q2M2H8 2515 aa9.68□□□□□ -0.86
NDEL1-204ENST00000578172 C9orf116Q5BN46 136 aaPredicted RBP9.68□□□□□ -0.86
NDEL1-204ENST00000578172 TIRAPP58753 221 aa9.68□□□□□ -0.86
NDEL1-204ENST00000578172 STAB1Q9NY15 2570 aa9.67□□□□□ -0.86
NDEL1-204ENST00000578172 PRB2P02812 416 aaPredicted RBP9.67□□□□□ -0.86
NDEL1-204ENST00000578172 UBL5Q9BZL1 73 aa9.67□□□□□ -0.86
NDEL1-204ENST00000578172 C16orf74Q96GX8 76 aa9.67□□□□□ -0.86
NDEL1-204ENST00000578172 SPANXDQ9BXN6 97 aa9.67□□□□□ -0.86
NDEL1-204ENST00000578172 SPANXCQ9NY87 97 aa9.67□□□□□ -0.86
NDEL1-204ENST00000578172 NHLRC4P0CG21 123 aaPredicted RBP9.66□□□□□ -0.86
NDEL1-204ENST00000578172 LINC00269Q8N2A0 174 aa9.66□□□□□ -0.86
NDEL1-204ENST00000578172 FAM222AQ5U5X8 452 aa9.66□□□□□ -0.86
NDEL1-204ENST00000578172 FAM218AQ96MZ4 157 aa9.66□□□□□ -0.86
NDEL1-204ENST00000578172 RBM3P98179 157 aaKnown RBP9.65□□□□□ -0.86
NDEL1-204ENST00000578172 TRBV6-8A0A0A6YYG3 113 aa9.64□□□□□ -0.87
NDEL1-204ENST00000578172 BEAN1Q3B7T3 259 aa9.64□□□□□ -0.87
NDEL1-204ENST00000578172 TENM4Q6N022 2769 aa9.64□□□□□ -0.87
NDEL1-204ENST00000578172 FAM110AQ9BQ89 295 aa9.64□□□□□ -0.87
NDEL1-204ENST00000578172 GHRHP01286 108 aa9.64□□□□□ -0.87
NDEL1-204ENST00000578172 SPATA3Q8NHX4 192 aa9.64□□□□□ -0.87
NDEL1-204ENST00000578172 SS18Q15532 418 aa9.63□□□□□ -0.87
NDEL1-204ENST00000578172 MRAPQ8TCY5 172 aa9.63□□□□□ -0.87
NDEL1-204ENST00000578172 TRBV10-1A0A0K0K1A3 114 aa9.63□□□□□ -0.87
NDEL1-204ENST00000578172 LINC00337Q8N6G1 96 aa9.63□□□□□ -0.87
NDEL1-204ENST00000578172 FSHBP01225 129 aa9.63□□□□□ -0.87
NDEL1-204ENST00000578172 ORMDL1Q9P0S3 153 aa9.63□□□□□ -0.87
NDEL1-204ENST00000578172 A0A087WYN8 130 aa9.62□□□□□ -0.87
NDEL1-204ENST00000578172 A8MTW9 85 aa9.62□□□□□ -0.87
NDEL1-204ENST00000578172 DAD1P61803 113 aa9.62□□□□□ -0.87
NDEL1-204ENST00000578172 HRCT1Q6UXD1 115 aa9.62□□□□□ -0.87
NDEL1-204ENST00000578172 INAFM1C9JVW0 142 aa9.62□□□□□ -0.87
NDEL1-204ENST00000578172 CCL18P55774 89 aa9.62□□□□□ -0.87
NDEL1-204ENST00000578172 FAM19A5Q7Z5A7 132 aaPredicted RBP9.62□□□□□ -0.87
NDEL1-204ENST00000578172 SMIM11BQ8TCY0 68 aa9.62□□□□□ -0.87
NDEL1-204ENST00000578172 GIG44P09565 113 aaPredicted RBP9.61□□□□□ -0.87
NDEL1-204ENST00000578172 OVOL2Q9BRP0 275 aa9.61□□□□□ -0.87
NDEL1-204ENST00000578172 TENM1Q9UKZ4 2725 aa9.6□□□□□ -0.87
NDEL1-204ENST00000578172 PDZD2O15018 2839 aa9.6□□□□□ -0.87
NDEL1-204ENST00000578172 FHL2Q14192 279 aa9.6□□□□□ -0.87
NDEL1-204ENST00000578172 Q6Q795 121 aa9.6□□□□□ -0.87
NDEL1-204ENST00000578172 ENHOQ6UWT2 76 aa9.6□□□□□ -0.87
NDEL1-204ENST00000578172 KLK12Q9UKR0 248 aa9.6□□□□□ -0.87
NDEL1-204ENST00000578172 TRAV25A0A0B4J276 109 aa9.6□□□□□ -0.87
NDEL1-204ENST00000578172 COX7CP15954 63 aa9.6□□□□□ -0.87
NDEL1-204ENST00000578172 SCXQ7RTU7 201 aa9.6□□□□□ -0.87
NDEL1-204ENST00000578172 PKIGQ9Y2B9 76 aa9.6□□□□□ -0.87
NDEL1-204ENST00000578172 USP17L23D6RBM5 183 aa9.59□□□□□ -0.87
NDEL1-204ENST00000578172 C5orf47Q569G3 176 aa9.59□□□□□ -0.87
NDEL1-204ENST00000578172 AKAP9Q99996 3911 aa9.58□□□□□ -0.88
NDEL1-204ENST00000578172 LINC00959A0A1B0GUT2 108 aa9.58□□□□□ -0.88
NDEL1-204ENST00000578172 COL6A5A8TX70 2615 aa9.58□□□□□ -0.88
NDEL1-204ENST00000578172 KRTAP1-3Q8IUG1 177 aa9.58□□□□□ -0.88
NDEL1-204ENST00000578172 XAGE1AQ9HD64 81 aa9.58□□□□□ -0.88
NDEL1-204ENST00000578172 IGLV1-51P01701 117 aa9.57□□□□□ -0.88
NDEL1-204ENST00000578172 SBSPONQ8IVN8 264 aa9.57□□□□□ -0.88
NDEL1-204ENST00000578172 IGLV5-39A0A0G2JS06 123 aa9.56□□□□□ -0.88
NDEL1-204ENST00000578172 A0A0U1RQV1 116 aa9.56□□□□□ -0.88
NDEL1-204ENST00000578172 C6orf223Q8N319 242 aa9.56□□□□□ -0.88
NDEL1-204ENST00000578172 SMIM9A6NGZ8 99 aa9.56□□□□□ -0.88
NDEL1-204ENST00000578172 TRBV6-4A0A1B0GX49 114 aa9.56□□□□□ -0.88
NDEL1-204ENST00000578172 OTOGQ6ZRI0 2925 aa9.56□□□□□ -0.88
NDEL1-204ENST00000578172 C9orf129Q5T035 196 aaKnown RBP9.55□□□□□ -0.88
NDEL1-204ENST00000578172 SNURFQ9Y675 71 aa9.55□□□□□ -0.88
NDEL1-204ENST00000578172 J3QKU1 62 aa9.55□□□□□ -0.88
NDEL1-204ENST00000578172 H0YGX0 51 aa9.55□□□□□ -0.88
NDEL1-204ENST00000578172 CXCL5P42830 114 aa9.55□□□□□ -0.88
NDEL1-204ENST00000578172 HIGD2BQ4VC39 106 aa9.55□□□□□ -0.88
NDEL1-204ENST00000578172 RPL18AQ02543 176 aaKnown RBP9.54□□□□□ -0.88
NDEL1-204ENST00000578172 KIR2DL5BQ8NHK3 375 aa9.54□□□□□ -0.88
NDEL1-204ENST00000578172 BAHCC1Q9P281 2608 aa9.54□□□□□ -0.88
NDEL1-204ENST00000578172 CHCHD10Q8WYQ3 142 aaPredicted RBP9.54□□□□□ -0.88
NDEL1-204ENST00000578172 PRO0255Q9UI72 69 aa9.54□□□□□ -0.88
NDEL1-204ENST00000578172 CSDC2Q9Y534 153 aaKnown RBP9.54□□□□□ -0.88
NDEL1-204ENST00000578172 PLAC8L1A1L4L8 177 aa9.53□□□□□ -0.88
NDEL1-204ENST00000578172 LRRC75A-AS1Q8N1F1 130 aa9.53□□□□□ -0.88
NDEL1-204ENST00000578172 TIMM17BO60830 172 aa9.53□□□□□ -0.88
NDEL1-204ENST00000578172 LY6G6DO95868 133 aa9.53□□□□□ -0.88
NDEL1-204ENST00000578172 IGKV2-28A0A075B6P5 120 aa9.52□□□□□ -0.88
NDEL1-204ENST00000578172 IGKV2D-28P01615 120 aa9.52□□□□□ -0.88
NDEL1-204ENST00000578172 FAM240AA0A1B0GVK7 77 aa9.52□□□□□ -0.89
NDEL1-204ENST00000578172 HILS1P60008 231 aa9.52□□□□□ -0.89
NDEL1-204ENST00000578172 BRK1Q8WUW1 75 aa9.52□□□□□ -0.89
NDEL1-204ENST00000578172 RETNQ9HD89 108 aa9.52□□□□□ -0.89
NDEL1-204ENST00000578172 IGHV4-28A0A0C4DH34 117 aa9.52□□□□□ -0.89
NDEL1-204ENST00000578172 REG3AQ06141 175 aa9.52□□□□□ -0.89
NDEL1-204ENST00000578172 SERP2Q8N6R1 65 aa9.52□□□□□ -0.89
NDEL1-204ENST00000578172 MPLKIPQ8TAP9 179 aa9.52□□□□□ -0.89
NDEL1-204ENST00000578172 UPK3BQ9BT76 320 aa9.52□□□□□ -0.89
NDEL1-204ENST00000578172 IMUPQ9GZP8 106 aa9.52□□□□□ -0.89
NDEL1-204ENST00000578172 IGHV3OR16-9A0A0B4J2B5 98 aa9.51□□□□□ -0.89
NDEL1-204ENST00000578172 IGLV5-45A0A087WSX0 123 aa9.51□□□□□ -0.89
NDEL1-204ENST00000578172 CMC4P56277 68 aaPredicted RBP9.51□□□□□ -0.89
NDEL1-204ENST00000578172 LINC00846Q9NV44 126 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms