RNA–Protein interactions for RNA: ENST00000577605.1

CASC3-205, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 714 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-205ENST00000577605 Q6ZN92 141 aa4.53□□□□□ -1.68
CASC3-205ENST00000577605 SCXQ7RTU7 201 aa4.53□□□□□ -1.68
CASC3-205ENST00000577605 DPH3Q96FX2 82 aa4.53□□□□□ -1.68
CASC3-205ENST00000577605 CYSLTR1Q9Y271 337 aa4.53□□□□□ -1.68
CASC3-205ENST00000577605 TRAV13-1A0A0B4J241 112 aa4.52□□□□□ -1.69
CASC3-205ENST00000577605 PRSS2P07478 247 aa4.52□□□□□ -1.69
CASC3-205ENST00000577605 SEC11AP67812 179 aa4.52□□□□□ -1.69
CASC3-205ENST00000577605 KRTAP5-3Q6L8H2 238 aa4.52□□□□□ -1.69
CASC3-205ENST00000577605 OR10D4PQ8NGN7 298 aa4.52□□□□□ -1.69
CASC3-205ENST00000577605 TMEM141Q96I45 108 aa4.52□□□□□ -1.69
CASC3-205ENST00000577605 DYNC1H1Q14204 4646 aaKnown RBP4.51□□□□□ -1.69
CASC3-205ENST00000577605 IGLV4-69A0A075B6H9 119 aa4.51□□□□□ -1.69
CASC3-205ENST00000577605 TGIF2-C20orf24A0A0A6YYL0 155 aa4.51□□□□□ -1.69
CASC3-205ENST00000577605 LOC389332A0A1B0GUA5 103 aa4.51□□□□□ -1.69
CASC3-205ENST00000577605 IFITM10A6NMD0 228 aa4.51□□□□□ -1.69
CASC3-205ENST00000577605 DLEU1O43261 78 aa4.51□□□□□ -1.69
CASC3-205ENST00000577605 RPL39P62891 51 aaKnown RBP4.51□□□□□ -1.69
CASC3-205ENST00000577605 SYCNQ0VAF6 134 aa4.51□□□□□ -1.69
CASC3-205ENST00000577605 HIGD2BQ4VC39 106 aa4.51□□□□□ -1.69
CASC3-205ENST00000577605 C2orf66Q6UXQ4 117 aa4.51□□□□□ -1.69
CASC3-205ENST00000577605 TEX43Q6ZNM6 134 aa4.51□□□□□ -1.69
CASC3-205ENST00000577605 Q6ZUT4 128 aa4.51□□□□□ -1.69
CASC3-205ENST00000577605 SVBPQ8N300 66 aa4.51□□□□□ -1.69
CASC3-205ENST00000577605 CARD19Q96LW7 228 aa4.51□□□□□ -1.69
CASC3-205ENST00000577605 RPS10P5Q9NQ39 176 aa4.51□□□□□ -1.69
CASC3-205ENST00000577605 PKHD1P08F94 4074 aa4.5□□□□□ -1.69
CASC3-205ENST00000577605 RYR1P21817 5038 aa4.5□□□□□ -1.69
CASC3-205ENST00000577605 IGHV3OR16-9A0A0B4J2B5 98 aa4.5□□□□□ -1.69
CASC3-205ENST00000577605 TSPAN13O95857 204 aa4.5□□□□□ -1.69
CASC3-205ENST00000577605 SPACA4Q8TDM5 124 aa4.5□□□□□ -1.69
CASC3-205ENST00000577605 FAM218AQ96MZ4 157 aa4.5□□□□□ -1.69
CASC3-205ENST00000577605 TIMM17AQ99595 171 aa4.5□□□□□ -1.69
CASC3-205ENST00000577605 PLAC8Q9NZF1 115 aa4.5□□□□□ -1.69
CASC3-205ENST00000577605 IGLV4-3A0A075B6K6 122 aa4.49□□□□□ -1.69
CASC3-205ENST00000577605 LOC107984640A0A0U1RRK4 108 aa4.49□□□□□ -1.69
CASC3-205ENST00000577605 LINC01546A6NGU7 62 aa4.49□□□□□ -1.69
CASC3-205ENST00000577605 IGIPA6NJ69 53 aa4.49□□□□□ -1.69
CASC3-205ENST00000577605 HAMPP81172 84 aa4.49□□□□□ -1.69
CASC3-205ENST00000577605 COX6A2Q02221 97 aa4.49□□□□□ -1.69
CASC3-205ENST00000577605 FAM19A3Q7Z5A8 133 aa4.49□□□□□ -1.69
CASC3-205ENST00000577605 C7orf33Q8WU49 177 aa4.49□□□□□ -1.69
CASC3-205ENST00000577605 TOMM6Q96B49 74 aa4.49□□□□□ -1.69
CASC3-205ENST00000577605 CAMK2N2Q96S95 79 aa4.49□□□□□ -1.69
CASC3-205ENST00000577605 A0A087WYN8 130 aa4.48□□□□□ -1.69
CASC3-205ENST00000577605 APOC3P02656 99 aa4.48□□□□□ -1.69
CASC3-205ENST00000577605 RPL37AP61513 92 aaKnown RBP4.48□□□□□ -1.69
CASC3-205ENST00000577605 SPAG11BQ08648 103 aa4.48□□□□□ -1.69
CASC3-205ENST00000577605 FABP9Q0Z7S8 132 aa4.48□□□□□ -1.69
CASC3-205ENST00000577605 RNASE13Q5GAN3 156 aaKnown RBP4.48□□□□□ -1.69
CASC3-205ENST00000577605 C5orf38Q86SI9 138 aa4.48□□□□□ -1.69
CASC3-205ENST00000577605 FAM104AQ969W3 186 aa4.48□□□□□ -1.69
CASC3-205ENST00000577605 PACRGQ96M98 296 aaPredicted RBP4.48□□□□□ -1.69
CASC3-205ENST00000577605 AMELXQ99217 191 aa4.48□□□□□ -1.69
CASC3-205ENST00000577605 MRPL35Q9NZE8 188 aaKnown RBP4.48□□□□□ -1.69
CASC3-205ENST00000577605 TSTD3H0UI37 97 aa4.47□□□□□ -1.69
CASC3-205ENST00000577605 NDUFA1O15239 70 aa4.47□□□□□ -1.69
CASC3-205ENST00000577605 DDTP30046 118 aa4.47□□□□□ -1.69
CASC3-205ENST00000577605 UBE2D1P51668 147 aa4.47□□□□□ -1.69
CASC3-205ENST00000577605 RAB5BP61020 215 aa4.47□□□□□ -1.69
CASC3-205ENST00000577605 HERVK_113P63121 156 aa4.47□□□□□ -1.69
CASC3-205ENST00000577605 KIAA1644Q3SXP7 199 aa4.47□□□□□ -1.69
CASC3-205ENST00000577605 LINC00242Q5T6M2 205 aa4.47□□□□□ -1.69
CASC3-205ENST00000577605 FA2HQ7L5A8 372 aa4.47□□□□□ -1.69
CASC3-205ENST00000577605 ORAOV1Q8WV07 137 aa4.47□□□□□ -1.69
CASC3-205ENST00000577605 SCGB3A1Q96QR1 104 aa4.47□□□□□ -1.69
CASC3-205ENST00000577605 SMCO4Q9NRQ5 59 aa4.47□□□□□ -1.69
CASC3-205ENST00000577605 LRP1BQ9NZR2 4599 aa4.46□□□□□ -1.69
CASC3-205ENST00000577605 KRTAP29-1A8MX34 341 aaPredicted RBP4.46□□□□□ -1.7
CASC3-205ENST00000577605 OXTP01178 125 aa4.46□□□□□ -1.7
CASC3-205ENST00000577605 Q6ZRU5 148 aa4.46□□□□□ -1.7
CASC3-205ENST00000577605 STPG4Q8N801 248 aa4.46□□□□□ -1.7
CASC3-205ENST00000577605 OPRPNQ99935 248 aaPredicted RBP4.46□□□□□ -1.7
CASC3-205ENST00000577605 TRAPPC1Q9Y5R8 145 aa4.46□□□□□ -1.7
CASC3-205ENST00000577605 DNAH5Q8TE73 4624 aa4.45□□□□□ -1.7
CASC3-205ENST00000577605 PCLOQ9Y6V0 5065 aa4.45□□□□□ -1.7
CASC3-205ENST00000577605 A0A096LNI7 61 aa4.45□□□□□ -1.7
CASC3-205ENST00000577605 IGKV2-24A0A0C4DH68 120 aa4.45□□□□□ -1.7
CASC3-205ENST00000577605 TRBV30A0A0K0K1B3 111 aa4.45□□□□□ -1.7
CASC3-205ENST00000577605 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.45□□□□□ -1.7
CASC3-205ENST00000577605 PANO1I0J062 215 aa4.45□□□□□ -1.7
CASC3-205ENST00000577605 HSBP1O75506 76 aa4.45□□□□□ -1.7
CASC3-205ENST00000577605 TLX1NBP0CAT3 122 aa4.45□□□□□ -1.7
CASC3-205ENST00000577605 CXCL5P42830 114 aa4.45□□□□□ -1.7
CASC3-205ENST00000577605 PPDPFQ9H3Y8 114 aa4.45□□□□□ -1.7
CASC3-205ENST00000577605 TINCRA0A1B0GVN0 87 aa4.44□□□□□ -1.7
CASC3-205ENST00000577605 CHTF8P0CG12 524 aa4.44□□□□□ -1.7
CASC3-205ENST00000577605 SCGB1A1P11684 91 aa4.44□□□□□ -1.7
CASC3-205ENST00000577605 HNRNPA3P51991 378 aaKnown RBP4.44□□□□□ -1.7
CASC3-205ENST00000577605 KRTAP10-4P60372 401 aaPredicted RBP4.44□□□□□ -1.7
CASC3-205ENST00000577605 CKS1BP61024 79 aa4.44□□□□□ -1.7
CASC3-205ENST00000577605 LINC00173Q6ZV60 143 aa4.44□□□□□ -1.7
CASC3-205ENST00000577605 Q8IZM0 81 aa4.44□□□□□ -1.7
CASC3-205ENST00000577605 MTURNQ8N3F0 131 aa4.44□□□□□ -1.7
CASC3-205ENST00000577605 MAP1LC3CQ9BXW4 147 aa4.44□□□□□ -1.7
CASC3-205ENST00000577605 KIAA0087Q14695 138 aa4.43□□□□□ -1.7
CASC3-205ENST00000577605 PMVKQ15126 192 aa4.43□□□□□ -1.7
CASC3-205ENST00000577605 PDZD11Q5EBL8 140 aa4.43□□□□□ -1.7
CASC3-205ENST00000577605 Q6ZRP5 223 aa4.43□□□□□ -1.7
CASC3-205ENST00000577605 LINC00526Q96FQ7 95 aa4.43□□□□□ -1.7
CASC3-205ENST00000577605 CST9LQ9H4G1 147 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms