RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 LINC00167Q96N53 147 aa7.73□□□□□ -1.17
COPS3-214ENST00000577246 VCX2Q9H322 139 aa7.73□□□□□ -1.17
COPS3-214ENST00000577246 MUC17Q685J3 4493 aa7.72□□□□□ -1.17
COPS3-214ENST00000577246 SRP19P09132 144 aaKnown RBP7.72□□□□□ -1.17
COPS3-214ENST00000577246 NPSP0C0P6 89 aa7.72□□□□□ -1.17
COPS3-214ENST00000577246 ADIRFQ15847 76 aa7.72□□□□□ -1.17
COPS3-214ENST00000577246 LCE2DQ5TA82 110 aaPredicted RBP7.72□□□□□ -1.17
COPS3-214ENST00000577246 PPDPFQ9H3Y8 114 aa7.72□□□□□ -1.17
COPS3-214ENST00000577246 CYSLTR1Q9Y271 337 aa7.72□□□□□ -1.17
COPS3-214ENST00000577246 RPL23P62829 140 aaKnown RBP7.71□□□□□ -1.18
COPS3-214ENST00000577246 HERVK_113P63121 156 aa7.71□□□□□ -1.18
COPS3-214ENST00000577246 MRPL54Q6P161 138 aaKnown RBP7.71□□□□□ -1.18
COPS3-214ENST00000577246 NKAPP1Q8N9T2 125 aa7.71□□□□□ -1.18
COPS3-214ENST00000577246 PAPPA-AS1Q5QFB9 102 aa7.7□□□□□ -1.18
COPS3-214ENST00000577246 TMEM136Q6ZRR5 245 aa7.7□□□□□ -1.18
COPS3-214ENST00000577246 FAM19A3Q7Z5A8 133 aa7.7□□□□□ -1.18
COPS3-214ENST00000577246 KRTAP13-1Q8IUC0 172 aa7.7□□□□□ -1.18
COPS3-214ENST00000577246 PRELID3AQ96N28 172 aa7.7□□□□□ -1.18
COPS3-214ENST00000577246 AMELXQ99217 191 aa7.7□□□□□ -1.18
COPS3-214ENST00000577246 GAGE10A6NGK3 116 aa7.69□□□□□ -1.18
COPS3-214ENST00000577246 C2orf66Q6UXQ4 117 aa7.69□□□□□ -1.18
COPS3-214ENST00000577246 LINC00337Q8N6G1 96 aa7.69□□□□□ -1.18
COPS3-214ENST00000577246 GEMIN7Q9H840 131 aaKnown RBP7.69□□□□□ -1.18
COPS3-214ENST00000577246 NAT8Q9UHE5 227 aa7.69□□□□□ -1.18
COPS3-214ENST00000577246 LAMTOR2Q9Y2Q5 125 aa7.69□□□□□ -1.18
COPS3-214ENST00000577246 IGLV5-37A0A075B6J1 123 aa7.68□□□□□ -1.18
COPS3-214ENST00000577246 A0A1B0GXF2 115 aa7.68□□□□□ -1.18
COPS3-214ENST00000577246 PNRC1Q12796 327 aaPredicted RBP7.68□□□□□ -1.18
COPS3-214ENST00000577246 SPAG11AQ6PDA7 123 aa7.68□□□□□ -1.18
COPS3-214ENST00000577246 FP248Q71RG6 208 aaPredicted RBP7.68□□□□□ -1.18
COPS3-214ENST00000577246 MAP1LC3AQ9H492 121 aa7.68□□□□□ -1.18
COPS3-214ENST00000577246 PRSS47A8MTI9 375 aa7.67□□□□□ -1.18
COPS3-214ENST00000577246 ORMDL2Q53FV1 153 aa7.67□□□□□ -1.18
COPS3-214ENST00000577246 ATP5L2Q7Z4Y8 100 aa7.67□□□□□ -1.18
COPS3-214ENST00000577246 CRCT1Q9UGL9 99 aa7.67□□□□□ -1.18
COPS3-214ENST00000577246 LOC389332A0A1B0GUA5 103 aa7.66□□□□□ -1.18
COPS3-214ENST00000577246 K7EMI3 77 aa7.66□□□□□ -1.18
COPS3-214ENST00000577246 ZC2HC1BQ5TFG8 222 aa7.66□□□□□ -1.18
COPS3-214ENST00000577246 CDKN2A-AS1Q9UH64 79 aa7.66□□□□□ -1.18
COPS3-214ENST00000577246 G0S2P27469 103 aa7.65□□□□□ -1.18
COPS3-214ENST00000577246 Q8N8P6 123 aa7.65□□□□□ -1.18
COPS3-214ENST00000577246 IGKV2-28A0A075B6P5 120 aa7.64□□□□□ -1.19
COPS3-214ENST00000577246 IGIPA6NJ69 53 aa7.64□□□□□ -1.19
COPS3-214ENST00000577246 IGKV2D-28P01615 120 aa7.64□□□□□ -1.19
COPS3-214ENST00000577246 ASB16-AS1Q495Z4 193 aa7.64□□□□□ -1.19
COPS3-214ENST00000577246 C4orf48Q5BLP8 95 aa7.63□□□□□ -1.19
COPS3-214ENST00000577246 PDZD11Q5EBL8 140 aa7.63□□□□□ -1.19
COPS3-214ENST00000577246 FAM19A1Q7Z5A9 133 aa7.63□□□□□ -1.19
COPS3-214ENST00000577246 COX7B2Q8TF08 81 aa7.63□□□□□ -1.19
COPS3-214ENST00000577246 GNB1LQ9BYB4 327 aa7.63□□□□□ -1.19
COPS3-214ENST00000577246 SEC61BP60468 96 aaKnown RBP7.62□□□□□ -1.19
COPS3-214ENST00000577246 PRLHP81277 87 aa7.62□□□□□ -1.19
COPS3-214ENST00000577246 SMIM1B2RUZ4 78 aa7.61□□□□□ -1.19
COPS3-214ENST00000577246 TIMM17AQ99595 171 aa7.61□□□□□ -1.19
COPS3-214ENST00000577246 FSIP2Q5CZC0 6907 aa7.6□□□□□ -1.19
COPS3-214ENST00000577246 RAB5BP61020 215 aa7.6□□□□□ -1.19
COPS3-214ENST00000577246 PLEKHB2Q96CS7 222 aa7.6□□□□□ -1.19
COPS3-214ENST00000577246 TMEM126AQ9H061 195 aa7.6□□□□□ -1.19
COPS3-214ENST00000577246 NXT2Q9NPJ8 142 aaKnown RBP7.6□□□□□ -1.19
COPS3-214ENST00000577246 ATP5LO75964 103 aa7.59□□□□□ -1.19
COPS3-214ENST00000577246 SRSF3P84103 164 aaKnown RBP7.59□□□□□ -1.19
COPS3-214ENST00000577246 PEA15Q15121 130 aa7.59□□□□□ -1.19
COPS3-214ENST00000577246 KRTAP13-3Q3SY46 172 aa7.59□□□□□ -1.19
COPS3-214ENST00000577246 AKAP14Q86UN6 197 aa7.59□□□□□ -1.19
COPS3-214ENST00000577246 CBLN2Q8IUK8 224 aa7.59□□□□□ -1.19
COPS3-214ENST00000577246 C3orf22Q8N5N4 141 aa7.59□□□□□ -1.19
COPS3-214ENST00000577246 A0A1B0GVG6 124 aa7.58□□□□□ -1.2
COPS3-214ENST00000577246 TINCRA0A1B0GVN0 87 aa7.58□□□□□ -1.2
COPS3-214ENST00000577246 RPL24P83731 157 aaKnown RBP7.58□□□□□ -1.2
COPS3-214ENST00000577246 TOMM6Q96B49 74 aa7.57□□□□□ -1.2
COPS3-214ENST00000577246 NDUFA12Q9UI09 145 aa7.57□□□□□ -1.2
COPS3-214ENST00000577246 ZNF706Q9Y5V0 76 aaPredicted RBP7.57□□□□□ -1.2
COPS3-214ENST00000577246 IGLV5-45A0A087WSX0 123 aa7.56□□□□□ -1.2
COPS3-214ENST00000577246 TMEM238C9JI98 176 aa7.56□□□□□ -1.2
COPS3-214ENST00000577246 C9JQL5 133 aa7.56□□□□□ -1.2
COPS3-214ENST00000577246 SCO1O75880 301 aa7.56□□□□□ -1.2
COPS3-214ENST00000577246 ERASQ7Z444 233 aa7.56□□□□□ -1.2
COPS3-214ENST00000577246 HIGD2AQ9BW72 106 aa7.56□□□□□ -1.2
COPS3-214ENST00000577246 LINC01549A6NIU2 74 aa7.55□□□□□ -1.2
COPS3-214ENST00000577246 M0R378 163 aa7.55□□□□□ -1.2
COPS3-214ENST00000577246 SPINK1P00995 79 aa7.55□□□□□ -1.2
COPS3-214ENST00000577246 SCGB3A1Q96QR1 104 aa7.55□□□□□ -1.2
COPS3-214ENST00000577246 MRPL18Q9H0U6 180 aaKnown RBP7.55□□□□□ -1.2
COPS3-214ENST00000577246 H3BRM9 83 aa7.54□□□□□ -1.2
COPS3-214ENST00000577246 SPINK8P0C7L1 97 aa7.54□□□□□ -1.2
COPS3-214ENST00000577246 VPREB1P12018 145 aa7.54□□□□□ -1.2
COPS3-214ENST00000577246 PFN2P35080 140 aa7.54□□□□□ -1.2
COPS3-214ENST00000577246 SPRR4Q96PI1 79 aa7.54□□□□□ -1.2
COPS3-214ENST00000577246 FAM19A2Q8N3H0 131 aa7.53□□□□□ -1.2
COPS3-214ENST00000577246 DAND5Q8N907 189 aa7.53□□□□□ -1.2
COPS3-214ENST00000577246 COX17Q14061 63 aa7.52□□□□□ -1.21
COPS3-214ENST00000577246 Q8NBF4 154 aa7.52□□□□□ -1.21
COPS3-214ENST00000577246 SND1-IT1Q9HBX3 110 aa7.52□□□□□ -1.21
COPS3-214ENST00000577246 KRTAP4-1Q9BYQ7 146 aa7.51□□□□□ -1.21
COPS3-214ENST00000577246 RAB14P61106 215 aa7.5□□□□□ -1.21
COPS3-214ENST00000577246 CST9LQ9H4G1 147 aa7.5□□□□□ -1.21
COPS3-214ENST00000577246 ERG28Q9UKR5 140 aa7.5□□□□□ -1.21
COPS3-214ENST00000577246 CFC1BP0CG36 223 aa7.49□□□□□ -1.21
COPS3-214ENST00000577246 SFTA2Q6UW10 78 aa7.49□□□□□ -1.21
COPS3-214ENST00000577246 ANAPC16Q96DE5 110 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 168.2 ms