RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 IMUPQ9GZP8 106 aa12.8□□□□□ -0.36
ATPAF1-214ENST00000576409 M0QXV9 152 aa12.8□□□□□ -0.36
ATPAF1-214ENST00000576409 COX7BP24311 80 aa12.8□□□□□ -0.36
ATPAF1-214ENST00000576409 SERP2Q8N6R1 65 aa12.8□□□□□ -0.36
ATPAF1-214ENST00000576409 COL27A1Q8IZC6 1860 aaPredicted RBP12.79□□□□□ -0.36
ATPAF1-214ENST00000576409 FAM110AQ9BQ89 295 aa12.79□□□□□ -0.36
ATPAF1-214ENST00000576409 LOC107984640A0A0U1RRK4 108 aa12.79□□□□□ -0.36
ATPAF1-214ENST00000576409 FHL3Q13643 280 aa12.79□□□□□ -0.36
ATPAF1-214ENST00000576409 LINC00337Q8N6G1 96 aa12.79□□□□□ -0.36
ATPAF1-214ENST00000576409 Q6Q795 121 aa12.78□□□□□ -0.36
ATPAF1-214ENST00000576409 ITPR3Q14573 2671 aa12.78□□□□□ -0.36
ATPAF1-214ENST00000576409 FAM240AA0A1B0GVK7 77 aa12.77□□□□□ -0.36
ATPAF1-214ENST00000576409 C3orf84H3BNL1 204 aa12.77□□□□□ -0.36
ATPAF1-214ENST00000576409 J3QKU1 62 aa12.77□□□□□ -0.37
ATPAF1-214ENST00000576409 MPLKIPQ8TAP9 179 aa12.77□□□□□ -0.37
ATPAF1-214ENST00000576409 UNQ6190/PRO20217Q6UXQ8 127 aa12.77□□□□□ -0.37
ATPAF1-214ENST00000576409 EIF4EBP3O60516 100 aaPredicted RBP12.76□□□□□ -0.37
ATPAF1-214ENST00000576409 SVIPQ8NHG7 77 aa12.75□□□□□ -0.37
ATPAF1-214ENST00000576409 LINC00846Q9NV44 126 aa12.75□□□□□ -0.37
ATPAF1-214ENST00000576409 SOSTDC1Q6X4U4 206 aa12.74□□□□□ -0.37
ATPAF1-214ENST00000576409 WDFY3Q8IZQ1 3526 aa12.74□□□□□ -0.37
ATPAF1-214ENST00000576409 A0A096LNI7 61 aa12.74□□□□□ -0.37
ATPAF1-214ENST00000576409 FAM19A4Q96LR4 140 aa12.74□□□□□ -0.37
ATPAF1-214ENST00000576409 IGKV2-28A0A075B6P5 120 aa12.73□□□□□ -0.37
ATPAF1-214ENST00000576409 IGKV2D-28P01615 120 aa12.73□□□□□ -0.37
ATPAF1-214ENST00000576409 RPL28P46779 137 aaKnown RBP12.73□□□□□ -0.37
ATPAF1-214ENST00000576409 TMEM258P61165 79 aa12.73□□□□□ -0.37
ATPAF1-214ENST00000576409 NTM-AS1Q6ZSK4 140 aa12.73□□□□□ -0.37
ATPAF1-214ENST00000576409 BPY2O14599 106 aa12.73□□□□□ -0.37
ATPAF1-214ENST00000576409 CCKP06307 115 aa12.72□□□□□ -0.37
ATPAF1-214ENST00000576409 BRK1Q8WUW1 75 aa12.72□□□□□ -0.37
ATPAF1-214ENST00000576409 FAM19A1Q7Z5A9 133 aa12.72□□□□□ -0.37
ATPAF1-214ENST00000576409 LRBAP50851 2863 aa12.72□□□□□ -0.37
ATPAF1-214ENST00000576409 CD164L2Q6UWJ8 174 aa12.72□□□□□ -0.37
ATPAF1-214ENST00000576409 ASH1LQ9NR48 2969 aaKnown RBP12.71□□□□□ -0.37
ATPAF1-214ENST00000576409 FAM236DA0A1B0GTK5 79 aa12.71□□□□□ -0.37
ATPAF1-214ENST00000576409 FAM236CP0DP71 79 aa12.71□□□□□ -0.37
ATPAF1-214ENST00000576409 IGKV2-24A0A0C4DH68 120 aa12.71□□□□□ -0.37
ATPAF1-214ENST00000576409 FAM218AQ96MZ4 157 aa12.71□□□□□ -0.37
ATPAF1-214ENST00000576409 HILS1P60008 231 aa12.71□□□□□ -0.38
ATPAF1-214ENST00000576409 SMR3AQ99954 134 aa12.7□□□□□ -0.38
ATPAF1-214ENST00000576409 PPDPFQ9H3Y8 114 aa12.7□□□□□ -0.38
ATPAF1-214ENST00000576409 NBEAL2Q6ZNJ1 2754 aa12.7□□□□□ -0.38
ATPAF1-214ENST00000576409 CYSRT1A8MQ03 144 aa12.7□□□□□ -0.38
ATPAF1-214ENST00000576409 C5orf47Q569G3 176 aa12.69□□□□□ -0.38
ATPAF1-214ENST00000576409 GCN1Q92616 2671 aaKnown RBP12.69□□□□□ -0.38
ATPAF1-214ENST00000576409 A0A087WZ39 114 aa12.69□□□□□ -0.38
ATPAF1-214ENST00000576409 PRR4Q16378 134 aa12.69□□□□□ -0.38
ATPAF1-214ENST00000576409 COL12A1Q99715 3063 aa12.68□□□□□ -0.38
ATPAF1-214ENST00000576409 BEAN1Q3B7T3 259 aa12.68□□□□□ -0.38
ATPAF1-214ENST00000576409 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.68□□□□□ -0.38
ATPAF1-214ENST00000576409 C11orf72Q8NBR9 251 aa12.68□□□□□ -0.38
ATPAF1-214ENST00000576409 A0A0U1RQV1 116 aa12.68□□□□□ -0.38
ATPAF1-214ENST00000576409 HRCT1Q6UXD1 115 aa12.67□□□□□ -0.38
ATPAF1-214ENST00000576409 C6orf223Q8N319 242 aa12.67□□□□□ -0.38
ATPAF1-214ENST00000576409 CDK2AP2O75956 126 aa12.67□□□□□ -0.38
ATPAF1-214ENST00000576409 PKIGQ9Y2B9 76 aa12.67□□□□□ -0.38
ATPAF1-214ENST00000576409 HIGD2AQ9BW72 106 aa12.66□□□□□ -0.38
ATPAF1-214ENST00000576409 FHL2Q14192 279 aa12.66□□□□□ -0.38
ATPAF1-214ENST00000576409 Q8N814 137 aa12.64□□□□□ -0.39
ATPAF1-214ENST00000576409 INAFM1C9JVW0 142 aa12.64□□□□□ -0.39
ATPAF1-214ENST00000576409 PDE6GP18545 87 aa12.64□□□□□ -0.39
ATPAF1-214ENST00000576409 Q6JHZ5 121 aa12.64□□□□□ -0.39
ATPAF1-214ENST00000576409 SBSPONQ8IVN8 264 aa12.64□□□□□ -0.39
ATPAF1-214ENST00000576409 BRI3O95415 125 aa12.63□□□□□ -0.39
ATPAF1-214ENST00000576409 Q8IZM0 81 aa12.63□□□□□ -0.39
ATPAF1-214ENST00000576409 LYRM9A8MSI8 78 aa12.63□□□□□ -0.39
ATPAF1-214ENST00000576409 NDUFS5O43920 106 aa12.63□□□□□ -0.39
ATPAF1-214ENST00000576409 IGLV5-39A0A0G2JS06 123 aa12.63□□□□□ -0.39
ATPAF1-214ENST00000576409 FAM19A5Q7Z5A7 132 aaPredicted RBP12.63□□□□□ -0.39
ATPAF1-214ENST00000576409 ZNF575Q86XF7 245 aa12.63□□□□□ -0.39
ATPAF1-214ENST00000576409 CSDC2Q9Y534 153 aaKnown RBP12.62□□□□□ -0.39
ATPAF1-214ENST00000576409 ITPR1Q14643 2758 aa12.61□□□□□ -0.39
ATPAF1-214ENST00000576409 TRBV10-3A0A0K0K1G6 114 aa12.61□□□□□ -0.39
ATPAF1-214ENST00000576409 RPL37AP8A6NKH3 93 aa12.61□□□□□ -0.39
ATPAF1-214ENST00000576409 LITAFQ99732 161 aa12.61□□□□□ -0.39
ATPAF1-214ENST00000576409 CELA1Q9UNI1 258 aa12.61□□□□□ -0.39
ATPAF1-214ENST00000576409 ZNF843Q8N446 348 aa12.6□□□□□ -0.39
ATPAF1-214ENST00000576409 ATP5EP2Q5VTU8 51 aa12.6□□□□□ -0.39
ATPAF1-214ENST00000576409 LRCOL1A6NCL2 159 aa12.59□□□□□ -0.39
ATPAF1-214ENST00000576409 SMIM9A6NGZ8 99 aa12.59□□□□□ -0.39
ATPAF1-214ENST00000576409 DCHS1Q96JQ0 3298 aa12.59□□□□□ -0.39
ATPAF1-214ENST00000576409 IGHV3OR16-9A0A0B4J2B5 98 aa12.59□□□□□ -0.39
ATPAF1-214ENST00000576409 ZNF73O43830 326 aaPredicted RBP12.59□□□□□ -0.39
ATPAF1-214ENST00000576409 TRBV7-7A0A0K0K1E9 115 aa12.57□□□□□ -0.4
ATPAF1-214ENST00000576409 IGLV1-51P01701 117 aa12.57□□□□□ -0.4
ATPAF1-214ENST00000576409 RMI2Q96E14 147 aa12.57□□□□□ -0.4
ATPAF1-214ENST00000576409 TEP1Q99973 2627 aaKnown RBP12.55□□□□□ -0.4
ATPAF1-214ENST00000576409 SYCNQ0VAF6 134 aa12.55□□□□□ -0.4
ATPAF1-214ENST00000576409 KPRPQ5T749 579 aaPredicted RBP12.55□□□□□ -0.4
ATPAF1-214ENST00000576409 FLNCQ14315 2725 aa12.55□□□□□ -0.4
ATPAF1-214ENST00000576409 DEFB131BA0A096LNP1 70 aa12.55□□□□□ -0.4
ATPAF1-214ENST00000576409 NDUFC2O95298 119 aa12.55□□□□□ -0.4
ATPAF1-214ENST00000576409 Q8N3U1 123 aa12.55□□□□□ -0.4
ATPAF1-214ENST00000576409 UNC79Q9P2D8 2635 aa12.54□□□□□ -0.4
ATPAF1-214ENST00000576409 NHLRC4P0CG21 123 aaPredicted RBP12.54□□□□□ -0.4
ATPAF1-214ENST00000576409 MP68P56378 58 aa12.54□□□□□ -0.4
ATPAF1-214ENST00000576409 C11orf45Q8TAV5 145 aa12.54□□□□□ -0.4
ATPAF1-214ENST00000576409 OXLD1Q5BKU9 147 aa12.53□□□□□ -0.4
ATPAF1-214ENST00000576409 Q8N9L7 120 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms