RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 C9orf118A6NHY6 69 aa3.68□□□□□ -1.82
SMG6-219ENST00000575663 H3BRM9 83 aa3.68□□□□□ -1.82
SMG6-219ENST00000575663 CCDC179H3BU77 68 aa3.68□□□□□ -1.82
SMG6-219ENST00000575663 H7C1H1 209 aa3.68□□□□□ -1.82
SMG6-219ENST00000575663 FABP2P12104 132 aa3.68□□□□□ -1.82
SMG6-219ENST00000575663 S100A4P26447 101 aaKnown RBP3.68□□□□□ -1.82
SMG6-219ENST00000575663 GAGE2BQ13066 116 aa3.68□□□□□ -1.82
SMG6-219ENST00000575663 GAGE2EQ4V326 116 aa3.68□□□□□ -1.82
SMG6-219ENST00000575663 MPV17L2Q567V2 206 aa3.68□□□□□ -1.82
SMG6-219ENST00000575663 TMEM136Q6ZRR5 245 aa3.68□□□□□ -1.82
SMG6-219ENST00000575663 Q6ZUT4 128 aa3.68□□□□□ -1.82
SMG6-219ENST00000575663 KIR2DL4Q99706 377 aa3.68□□□□□ -1.82
SMG6-219ENST00000575663 PMCHL2Q9BQD1 86 aa3.68□□□□□ -1.82
SMG6-219ENST00000575663 NAA38Q9BRA0 125 aaKnown RBP3.68□□□□□ -1.82
SMG6-219ENST00000575663 TMEM191AQ9H0A3 160 aa3.68□□□□□ -1.82
SMG6-219ENST00000575663 GAGE2DQ9UEU5 116 aa3.68□□□□□ -1.82
SMG6-219ENST00000575663 APCSP02743 223 aa3.67□□□□□ -1.82
SMG6-219ENST00000575663 RPL36AP83881 106 aaKnown RBP3.67□□□□□ -1.82
SMG6-219ENST00000575663 CLPSL2Q6UWE3 100 aa3.67□□□□□ -1.82
SMG6-219ENST00000575663 LYZL1Q6UWQ5 148 aa3.67□□□□□ -1.82
SMG6-219ENST00000575663 Q6ZRP5 223 aa3.67□□□□□ -1.82
SMG6-219ENST00000575663 C14orf178Q8N769 122 aaPredicted RBP3.67□□□□□ -1.82
SMG6-219ENST00000575663 RPL36ALQ969Q0 106 aaKnown RBP3.67□□□□□ -1.82
SMG6-219ENST00000575663 RAB37Q96AX2 223 aa3.67□□□□□ -1.82
SMG6-219ENST00000575663 PGLYRP4Q96LB8 373 aa3.67□□□□□ -1.82
SMG6-219ENST00000575663 MRPL18Q9H0U6 180 aaKnown RBP3.67□□□□□ -1.82
SMG6-219ENST00000575663 CDIP1Q9H305 208 aa3.67□□□□□ -1.82
SMG6-219ENST00000575663 PSORS1C2Q9UIG4 136 aa3.67□□□□□ -1.82
SMG6-219ENST00000575663 PHLDA3Q9Y5J5 127 aa3.67□□□□□ -1.82
SMG6-219ENST00000575663 SPCS1Q9Y6A9 102 aa3.67□□□□□ -1.82
SMG6-219ENST00000575663 TRBV6-8A0A0A6YYG3 113 aa3.66□□□□□ -1.82
SMG6-219ENST00000575663 IGKV2-24A0A0C4DH68 120 aa3.66□□□□□ -1.82
SMG6-219ENST00000575663 TRBV10-1A0A0K0K1A3 114 aa3.66□□□□□ -1.82
SMG6-219ENST00000575663 FAM236DA0A1B0GTK5 79 aa3.66□□□□□ -1.82
SMG6-219ENST00000575663 LINC01549A6NIU2 74 aa3.66□□□□□ -1.82
SMG6-219ENST00000575663 H3BS24 57 aa3.66□□□□□ -1.82
SMG6-219ENST00000575663 K7EMI3 77 aa3.66□□□□□ -1.82
SMG6-219ENST00000575663 SNCGO76070 127 aa3.66□□□□□ -1.82
SMG6-219ENST00000575663 ARMS2P0C7Q2 107 aa3.66□□□□□ -1.82
SMG6-219ENST00000575663 FAM236CP0DP71 79 aa3.66□□□□□ -1.82
SMG6-219ENST00000575663 RNASE3P12724 160 aaKnown RBP3.66□□□□□ -1.82
SMG6-219ENST00000575663 TWIST1Q15672 202 aa3.66□□□□□ -1.82
SMG6-219ENST00000575663 PRR4Q16378 134 aa3.66□□□□□ -1.82
SMG6-219ENST00000575663 BVES-AS1Q5T3Y7 98 aa3.66□□□□□ -1.82
SMG6-219ENST00000575663 FAM74A4Q5TZK3 123 aa3.66□□□□□ -1.82
SMG6-219ENST00000575663 SPANXN1Q5VSR9 72 aa3.66□□□□□ -1.82
SMG6-219ENST00000575663 FAM104BQ5XKR9 115 aa3.66□□□□□ -1.82
SMG6-219ENST00000575663 HRCT1Q6UXD1 115 aa3.66□□□□□ -1.82
SMG6-219ENST00000575663 OR10AG1Q8NH19 301 aa3.66□□□□□ -1.82
SMG6-219ENST00000575663 CHCHD5Q9BSY4 110 aa3.66□□□□□ -1.82
SMG6-219ENST00000575663 JPT2Q9H910 190 aa3.66□□□□□ -1.82
SMG6-219ENST00000575663 C11orf21Q9P2W6 132 aa3.66□□□□□ -1.82
SMG6-219ENST00000575663 IGLV10-54A0A075B6I4 117 aa3.65□□□□□ -1.83
SMG6-219ENST00000575663 TRBV7-3A0A075B6L6 115 aa3.65□□□□□ -1.83
SMG6-219ENST00000575663 M0R381 172 aa3.65□□□□□ -1.83
SMG6-219ENST00000575663 NCR2O95944 276 aa3.65□□□□□ -1.83
SMG6-219ENST00000575663 UBE2D3P61077 147 aa3.65□□□□□ -1.83
SMG6-219ENST00000575663 UBE2D2P62837 147 aa3.65□□□□□ -1.83
SMG6-219ENST00000575663 COX6A2Q02221 97 aa3.65□□□□□ -1.83
SMG6-219ENST00000575663 FOXI1Q12951 378 aa3.65□□□□□ -1.83
SMG6-219ENST00000575663 SRSF9Q13242 221 aaKnown RBP eCLIP3.65□□□□□ -1.83
SMG6-219ENST00000575663 PMAIP1Q13794 54 aa3.65□□□□□ -1.83
SMG6-219ENST00000575663 C9orf153Q5TBE3 101 aa3.65□□□□□ -1.83
SMG6-219ENST00000575663 Q6ZVH6 145 aa3.65□□□□□ -1.83
SMG6-219ENST00000575663 ORMDL3Q8N138 153 aa3.65□□□□□ -1.83
SMG6-219ENST00000575663 LINC00269Q8N2A0 174 aa3.65□□□□□ -1.83
SMG6-219ENST00000575663 CHCHD1Q96BP2 118 aaKnown RBP3.65□□□□□ -1.83
SMG6-219ENST00000575663 PRR34Q9NV39 138 aa3.65□□□□□ -1.83
SMG6-219ENST00000575663 LINC00474Q9P2X8 69 aa3.65□□□□□ -1.83
SMG6-219ENST00000575663 Q9UF83 564 aa3.65□□□□□ -1.83
SMG6-219ENST00000575663 LAMTOR3Q9UHA4 124 aa3.65□□□□□ -1.83
SMG6-219ENST00000575663 TMSB15BA0A087X1C1 80 aa3.64□□□□□ -1.83
SMG6-219ENST00000575663 LOC107984640A0A0U1RRK4 108 aa3.64□□□□□ -1.83
SMG6-219ENST00000575663 GRIFINA4D1Z8 144 aa3.64□□□□□ -1.83
SMG6-219ENST00000575663 KRTAP26-1Q6PEX3 210 aa3.64□□□□□ -1.83
SMG6-219ENST00000575663 C20orf78Q9BR46 151 aa3.64□□□□□ -1.83
SMG6-219ENST00000575663 CRCT1Q9UGL9 99 aa3.64□□□□□ -1.83
SMG6-219ENST00000575663 MUC17Q685J3 4493 aa3.63□□□□□ -1.83
SMG6-219ENST00000575663 TRAV8-4A0A0B4J246 113 aa3.63□□□□□ -1.83
SMG6-219ENST00000575663 MUC21A0A0G2JKD1 596 aa3.63□□□□□ -1.83
SMG6-219ENST00000575663 TRBV6-5A0A0K0K1A5 114 aa3.63□□□□□ -1.83
SMG6-219ENST00000575663 A0A1W2PPM0 123 aa3.63□□□□□ -1.83
SMG6-219ENST00000575663 LINC01546A6NGU7 62 aa3.63□□□□□ -1.83
SMG6-219ENST00000575663 H3BVH4 76 aa3.63□□□□□ -1.83
SMG6-219ENST00000575663 MT-ATP8P03928 68 aa3.63□□□□□ -1.83
SMG6-219ENST00000575663 CKS2P33552 79 aa3.63□□□□□ -1.83
SMG6-219ENST00000575663 TMEM258P61165 79 aa3.63□□□□□ -1.83
SMG6-219ENST00000575663 REG3AQ06141 175 aa3.63□□□□□ -1.83
SMG6-219ENST00000575663 KIAA1644Q3SXP7 199 aa3.63□□□□□ -1.83
SMG6-219ENST00000575663 BAGE3Q86Y29 109 aa3.63□□□□□ -1.83
SMG6-219ENST00000575663 NXT2Q9NPJ8 142 aaKnown RBP3.63□□□□□ -1.83
SMG6-219ENST00000575663 TRBV25-1A0A075B6N4 114 aa3.62□□□□□ -1.83
SMG6-219ENST00000575663 FAM240AA0A1B0GVK7 77 aa3.62□□□□□ -1.83
SMG6-219ENST00000575663 VCYO14598 125 aa3.62□□□□□ -1.83
SMG6-219ENST00000575663 APOMO95445 188 aa3.62□□□□□ -1.83
SMG6-219ENST00000575663 SLPIP03973 132 aa3.62□□□□□ -1.83
SMG6-219ENST00000575663 HERVK_113P63121 156 aa3.62□□□□□ -1.83
SMG6-219ENST00000575663 MRPL51Q4U2R6 128 aaKnown RBP3.62□□□□□ -1.83
SMG6-219ENST00000575663 SLC25A34Q6PIV7 304 aa3.62□□□□□ -1.83
SMG6-219ENST00000575663 PRSS3P2Q8NHM4 247 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms