RNA–Protein interactions for RNA: ENST00000575560.5

CALCOCO2-227, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 540 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-227ENST00000575560 C6orf226Q5I0X4 101 aa5.73□□□□□ -1.49
CALCOCO2-227ENST00000575560 Q6ZN92 141 aa5.73□□□□□ -1.49
CALCOCO2-227ENST00000575560 Q8IZM0 81 aa5.73□□□□□ -1.49
CALCOCO2-227ENST00000575560 EIF5A2Q9GZV4 153 aaKnown RBP5.73□□□□□ -1.49
CALCOCO2-227ENST00000575560 SRP19P09132 144 aaKnown RBP5.72□□□□□ -1.49
CALCOCO2-227ENST00000575560 RAB5AP20339 215 aa5.72□□□□□ -1.49
CALCOCO2-227ENST00000575560 TEX43Q6ZNM6 134 aa5.72□□□□□ -1.49
CALCOCO2-227ENST00000575560 TCTE3Q8IZS6 198 aa5.72□□□□□ -1.49
CALCOCO2-227ENST00000575560 PPDPFQ9H3Y8 114 aa5.72□□□□□ -1.49
CALCOCO2-227ENST00000575560 TOMM7Q9P0U1 55 aa5.72□□□□□ -1.49
CALCOCO2-227ENST00000575560 PPBPP02775 128 aa5.71□□□□□ -1.5
CALCOCO2-227ENST00000575560 ZC2HC1BQ5TFG8 222 aa5.71□□□□□ -1.5
CALCOCO2-227ENST00000575560 FAM19A3Q7Z5A8 133 aa5.71□□□□□ -1.5
CALCOCO2-227ENST00000575560 AMELXQ99217 191 aa5.71□□□□□ -1.5
CALCOCO2-227ENST00000575560 ALKBH7Q9BT30 221 aaPredicted RBP5.71□□□□□ -1.5
CALCOCO2-227ENST00000575560 IGKV2D-26A0A0A0MRZ7 120 aa5.7□□□□□ -1.5
CALCOCO2-227ENST00000575560 A0A1B0GXF2 115 aa5.7□□□□□ -1.5
CALCOCO2-227ENST00000575560 PRSS47A8MTI9 375 aa5.7□□□□□ -1.5
CALCOCO2-227ENST00000575560 F8VRH5 84 aa5.7□□□□□ -1.5
CALCOCO2-227ENST00000575560 F8W036 122 aa5.7□□□□□ -1.5
CALCOCO2-227ENST00000575560 LINC01547P58512 204 aaPredicted RBP5.7□□□□□ -1.5
CALCOCO2-227ENST00000575560 RPL23P62829 140 aaKnown RBP5.7□□□□□ -1.5
CALCOCO2-227ENST00000575560 ALKAL2Q6UX46 152 aa5.7□□□□□ -1.5
CALCOCO2-227ENST00000575560 C2orf66Q6UXQ4 117 aa5.7□□□□□ -1.5
CALCOCO2-227ENST00000575560 C2orf88Q9BSF0 95 aa5.7□□□□□ -1.5
CALCOCO2-227ENST00000575560 IGLV5-37A0A075B6J1 123 aa5.69□□□□□ -1.5
CALCOCO2-227ENST00000575560 ASB16-AS1Q495Z4 193 aa5.69□□□□□ -1.5
CALCOCO2-227ENST00000575560 KRTAP4-1Q9BYQ7 146 aa5.69□□□□□ -1.5
CALCOCO2-227ENST00000575560 VCX2Q9H322 139 aa5.69□□□□□ -1.5
CALCOCO2-227ENST00000575560 GAGE10A6NGK3 116 aa5.68□□□□□ -1.5
CALCOCO2-227ENST00000575560 H3BS24 57 aa5.68□□□□□ -1.5
CALCOCO2-227ENST00000575560 S100A8P05109 93 aa5.68□□□□□ -1.5
CALCOCO2-227ENST00000575560 UBE2AP49459 152 aa5.68□□□□□ -1.5
CALCOCO2-227ENST00000575560 MRPL54Q6P161 138 aaKnown RBP5.68□□□□□ -1.5
CALCOCO2-227ENST00000575560 TMEM136Q6ZRR5 245 aa5.68□□□□□ -1.5
CALCOCO2-227ENST00000575560 ORMDL3Q8N138 153 aa5.68□□□□□ -1.5
CALCOCO2-227ENST00000575560 PRELID3AQ96N28 172 aa5.68□□□□□ -1.5
CALCOCO2-227ENST00000575560 CDKN2A-AS1Q9UH64 79 aa5.68□□□□□ -1.5
CALCOCO2-227ENST00000575560 IGIPA6NJ69 53 aa5.67□□□□□ -1.5
CALCOCO2-227ENST00000575560 NPSP0C0P6 89 aa5.67□□□□□ -1.5
CALCOCO2-227ENST00000575560 PNRC1Q12796 327 aaPredicted RBP5.67□□□□□ -1.5
CALCOCO2-227ENST00000575560 CYSLTR1Q9Y271 337 aa5.67□□□□□ -1.5
CALCOCO2-227ENST00000575560 CXCL5P42830 114 aa5.66□□□□□ -1.5
CALCOCO2-227ENST00000575560 HERVK_113P63121 156 aa5.66□□□□□ -1.5
CALCOCO2-227ENST00000575560 ADIRFQ15847 76 aa5.66□□□□□ -1.5
CALCOCO2-227ENST00000575560 KRTAP13-3Q3SY46 172 aa5.66□□□□□ -1.5
CALCOCO2-227ENST00000575560 FP248Q71RG6 208 aaPredicted RBP5.66□□□□□ -1.5
CALCOCO2-227ENST00000575560 KRTAP4-8Q9BYQ9 185 aa5.66□□□□□ -1.5
CALCOCO2-227ENST00000575560 LOC389332A0A1B0GUA5 103 aa5.65□□□□□ -1.5
CALCOCO2-227ENST00000575560 SEC11AP67812 179 aa5.65□□□□□ -1.5
CALCOCO2-227ENST00000575560 SPAG11AQ6PDA7 123 aa5.65□□□□□ -1.5
CALCOCO2-227ENST00000575560 C3orf22Q8N5N4 141 aa5.65□□□□□ -1.5
CALCOCO2-227ENST00000575560 PLEKHB2Q96CS7 222 aa5.65□□□□□ -1.5
CALCOCO2-227ENST00000575560 NAT8Q9UHE5 227 aa5.65□□□□□ -1.5
CALCOCO2-227ENST00000575560 IGKV2-28A0A075B6P5 120 aa5.64□□□□□ -1.51
CALCOCO2-227ENST00000575560 C9JQL5 133 aa5.64□□□□□ -1.51
CALCOCO2-227ENST00000575560 IGKV2D-28P01615 120 aa5.64□□□□□ -1.51
CALCOCO2-227ENST00000575560 LINC00337Q8N6G1 96 aa5.64□□□□□ -1.51
CALCOCO2-227ENST00000575560 Q8N8P6 123 aa5.64□□□□□ -1.51
CALCOCO2-227ENST00000575560 NKAPP1Q8N9T2 125 aa5.64□□□□□ -1.51
CALCOCO2-227ENST00000575560 LAMTOR2Q9Y2Q5 125 aa5.64□□□□□ -1.51
CALCOCO2-227ENST00000575560 SMIM1B2RUZ4 78 aa5.63□□□□□ -1.51
CALCOCO2-227ENST00000575560 SCO1O75880 301 aa5.63□□□□□ -1.51
CALCOCO2-227ENST00000575560 PRLHP81277 87 aa5.63□□□□□ -1.51
CALCOCO2-227ENST00000575560 SRSF3P84103 164 aaKnown RBP5.63□□□□□ -1.51
CALCOCO2-227ENST00000575560 ATP5L2Q7Z4Y8 100 aa5.63□□□□□ -1.51
CALCOCO2-227ENST00000575560 MAP1LC3AQ9H492 121 aa5.63□□□□□ -1.51
CALCOCO2-227ENST00000575560 GEMIN7Q9H840 131 aaKnown RBP5.63□□□□□ -1.51
CALCOCO2-227ENST00000575560 K7EMI3 77 aa5.62□□□□□ -1.51
CALCOCO2-227ENST00000575560 RAB5BP61020 215 aa5.62□□□□□ -1.51
CALCOCO2-227ENST00000575560 ORMDL2Q53FV1 153 aa5.62□□□□□ -1.51
CALCOCO2-227ENST00000575560 PDZD11Q5EBL8 140 aa5.62□□□□□ -1.51
CALCOCO2-227ENST00000575560 PAPPA-AS1Q5QFB9 102 aa5.62□□□□□ -1.51
CALCOCO2-227ENST00000575560 COX7B2Q8TF08 81 aa5.62□□□□□ -1.51
CALCOCO2-227ENST00000575560 TMEM126AQ9H061 195 aa5.62□□□□□ -1.51
CALCOCO2-227ENST00000575560 TMEM238C9JI98 176 aa5.61□□□□□ -1.51
CALCOCO2-227ENST00000575560 SEC61BP60468 96 aaKnown RBP5.61□□□□□ -1.51
CALCOCO2-227ENST00000575560 FAM19A1Q7Z5A9 133 aa5.61□□□□□ -1.51
CALCOCO2-227ENST00000575560 IGLV5-45A0A087WSX0 123 aa5.6□□□□□ -1.51
CALCOCO2-227ENST00000575560 M0R378 163 aa5.6□□□□□ -1.51
CALCOCO2-227ENST00000575560 TIMM17AQ99595 171 aa5.6□□□□□ -1.51
CALCOCO2-227ENST00000575560 GNB1LQ9BYB4 327 aa5.6□□□□□ -1.51
CALCOCO2-227ENST00000575560 TINCRA0A1B0GVN0 87 aa5.59□□□□□ -1.51
CALCOCO2-227ENST00000575560 VPREB1P12018 145 aa5.59□□□□□ -1.51
CALCOCO2-227ENST00000575560 CBLN2Q8IUK8 224 aa5.59□□□□□ -1.51
CALCOCO2-227ENST00000575560 TOMM6Q96B49 74 aa5.59□□□□□ -1.51
CALCOCO2-227ENST00000575560 G0S2P27469 103 aa5.58□□□□□ -1.52
CALCOCO2-227ENST00000575560 ERASQ7Z444 233 aa5.58□□□□□ -1.52
CALCOCO2-227ENST00000575560 SPRR4Q96PI1 79 aa5.58□□□□□ -1.52
CALCOCO2-227ENST00000575560 NXT2Q9NPJ8 142 aaKnown RBP5.58□□□□□ -1.52
CALCOCO2-227ENST00000575560 SPINK1P00995 79 aa5.57□□□□□ -1.52
CALCOCO2-227ENST00000575560 PEA15Q15121 130 aa5.57□□□□□ -1.52
CALCOCO2-227ENST00000575560 KRTAP19-2Q3LHN2 52 aa5.57□□□□□ -1.52
CALCOCO2-227ENST00000575560 hCG_2014768A0A024R1R8 64 aa5.56□□□□□ -1.52
CALCOCO2-227ENST00000575560 SPINK8P0C7L1 97 aa5.56□□□□□ -1.52
CALCOCO2-227ENST00000575560 ADCYAP1P18509 176 aa5.56□□□□□ -1.52
CALCOCO2-227ENST00000575560 AKAP14Q86UN6 197 aa5.56□□□□□ -1.52
CALCOCO2-227ENST00000575560 DAND5Q8N907 189 aa5.56□□□□□ -1.52
CALCOCO2-227ENST00000575560 Q8NBF4 154 aa5.56□□□□□ -1.52
CALCOCO2-227ENST00000575560 Q8NDZ9 215 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms