RNA–Protein interactions for RNA: ENST00000574897.5

NPLOC4-217, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 2,365 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-217ENST00000574897 CARD19Q96LW7 228 aa16.21■□□□□ 0.19
NPLOC4-217ENST00000574897 ANKRD29Q8N6D5 301 aa16.21■□□□□ 0.19
NPLOC4-217ENST00000574897 PCP4P48539 62 aa16.2■□□□□ 0.18
NPLOC4-217ENST00000574897 REG3AQ06141 175 aa16.2■□□□□ 0.18
NPLOC4-217ENST00000574897 C21orf62-AS1Q17RA5 79 aa16.2■□□□□ 0.18
NPLOC4-217ENST00000574897 C2orf82Q6UX34 121 aa16.2■□□□□ 0.18
NPLOC4-217ENST00000574897 C6orf226Q5I0X4 101 aa16.2■□□□□ 0.18
NPLOC4-217ENST00000574897 TEN1Q86WV5 123 aa16.2■□□□□ 0.18
NPLOC4-217ENST00000574897 COL6A5A8TX70 2615 aa16.2■□□□□ 0.18
NPLOC4-217ENST00000574897 EGFEM1PQ0D2K5 195 aa16.19■□□□□ 0.18
NPLOC4-217ENST00000574897 CHCHD10Q8WYQ3 142 aaPredicted RBP16.19■□□□□ 0.18
NPLOC4-217ENST00000574897 COPS9Q8WXC6 57 aa16.18■□□□□ 0.18
NPLOC4-217ENST00000574897 BAHCC1Q9P281 2608 aa16.18■□□□□ 0.18
NPLOC4-217ENST00000574897 COX6CP09669 75 aa16.17■□□□□ 0.18
NPLOC4-217ENST00000574897 J3QR89 54 aa16.16■□□□□ 0.18
NPLOC4-217ENST00000574897 LELP1Q5T871 98 aa16.16■□□□□ 0.18
NPLOC4-217ENST00000574897 CCL18P55774 89 aa16.15■□□□□ 0.18
NPLOC4-217ENST00000574897 SND1-IT1Q9HBX3 110 aa16.15■□□□□ 0.18
NPLOC4-217ENST00000574897 IGKV2-28A0A075B6P5 120 aa16.14■□□□□ 0.17
NPLOC4-217ENST00000574897 IBA57-AS1B1ANH7 110 aa16.14■□□□□ 0.17
NPLOC4-217ENST00000574897 IGKV2D-28P01615 120 aa16.14■□□□□ 0.17
NPLOC4-217ENST00000574897 CD164L2Q6UWJ8 174 aa16.14■□□□□ 0.17
NPLOC4-217ENST00000574897 Q8IZM0 81 aa16.13■□□□□ 0.17
NPLOC4-217ENST00000574897 LINC00337Q8N6G1 96 aa16.13■□□□□ 0.17
NPLOC4-217ENST00000574897 PPDPFLQ8WWR9 84 aa16.13■□□□□ 0.17
NPLOC4-217ENST00000574897 DNAH3Q8TD57 4116 aa16.13■□□□□ 0.17
NPLOC4-217ENST00000574897 LST1O00453 97 aa16.13■□□□□ 0.17
NPLOC4-217ENST00000574897 Q6ZTC4 211 aa16.13■□□□□ 0.17
NPLOC4-217ENST00000574897 COX7A2LO14548 114 aa16.12■□□□□ 0.17
NPLOC4-217ENST00000574897 KIAA0087Q14695 138 aa16.11■□□□□ 0.17
NPLOC4-217ENST00000574897 LYPD5Q6UWN5 251 aa16.11■□□□□ 0.17
NPLOC4-217ENST00000574897 KLK12Q9UKR0 248 aa16.11■□□□□ 0.17
NPLOC4-217ENST00000574897 TRBV10-2A0A0K0K1G8 114 aa16.11■□□□□ 0.17
NPLOC4-217ENST00000574897 GAGE12HA6NDE8 117 aa16.11■□□□□ 0.17
NPLOC4-217ENST00000574897 NTN5Q8WTR8 489 aaPredicted RBP16.09■□□□□ 0.17
NPLOC4-217ENST00000574897 PPDPFQ9H3Y8 114 aa16.09■□□□□ 0.17
NPLOC4-217ENST00000574897 MALP21145 153 aa16.08■□□□□ 0.16
NPLOC4-217ENST00000574897 KPRPQ5T749 579 aaPredicted RBP16.08■□□□□ 0.16
NPLOC4-217ENST00000574897 CRPP02741 224 aa16.07■□□□□ 0.16
NPLOC4-217ENST00000574897 CKS1BP61024 79 aa16.07■□□□□ 0.16
NPLOC4-217ENST00000574897 NBEAL1Q6ZS30 2694 aa16.07■□□□□ 0.16
NPLOC4-217ENST00000574897 A0A0J9YWU9 116 aa16.07■□□□□ 0.16
NPLOC4-217ENST00000574897 PRB2P02812 416 aaPredicted RBP16.07■□□□□ 0.16
NPLOC4-217ENST00000574897 LINC01561Q8N1V8 128 aa16.07■□□□□ 0.16
NPLOC4-217ENST00000574897 M0QXV9 152 aa16.06■□□□□ 0.16
NPLOC4-217ENST00000574897 C9orf116Q5BN46 136 aaPredicted RBP16.06■□□□□ 0.16
NPLOC4-217ENST00000574897 SPATA25Q9BR10 227 aa16.06■□□□□ 0.16
NPLOC4-217ENST00000574897 ENHOQ6UWT2 76 aa16.05■□□□□ 0.16
NPLOC4-217ENST00000574897 LINC00526Q96FQ7 95 aa16.05■□□□□ 0.16
NPLOC4-217ENST00000574897 TEX49A0A1B0GTD5 131 aa16.05■□□□□ 0.16
NPLOC4-217ENST00000574897 WFDC10BQ8IUB3 73 aa16.05■□□□□ 0.16
NPLOC4-217ENST00000574897 TRAV13-2A0A0B4J235 113 aa16.04■□□□□ 0.16
NPLOC4-217ENST00000574897 NANOS2P60321 138 aaKnown RBP16.04■□□□□ 0.16
NPLOC4-217ENST00000574897 CFAP161Q6P656 301 aa16.04■□□□□ 0.16
NPLOC4-217ENST00000574897 FAM218AQ96MZ4 157 aa16.04■□□□□ 0.16
NPLOC4-217ENST00000574897 C6orf223Q8N319 242 aa16.03■□□□□ 0.16
NPLOC4-217ENST00000574897 PRR34Q9NV39 138 aa16.03■□□□□ 0.16
NPLOC4-217ENST00000574897 LINC01600Q96MT4 127 aa16.01■□□□□ 0.15
NPLOC4-217ENST00000574897 CDIP1Q9H305 208 aa16.01■□□□□ 0.15
NPLOC4-217ENST00000574897 SMIM11BQ8TCY0 68 aa16■□□□□ 0.15
NPLOC4-217ENST00000574897 C10orf25Q5T742 122 aa15.99■□□□□ 0.15
NPLOC4-217ENST00000574897 UBE2WQ96B02 151 aa15.99■□□□□ 0.15
NPLOC4-217ENST00000574897 RPL28P46779 137 aaKnown RBP15.99■□□□□ 0.15
NPLOC4-217ENST00000574897 PRR3P79522 188 aaKnown RBP15.99■□□□□ 0.15
NPLOC4-217ENST00000574897 H3BT86 120 aa15.98■□□□□ 0.15
NPLOC4-217ENST00000574897 SIGMAR1Q99720 223 aa15.98■□□□□ 0.15
NPLOC4-217ENST00000574897 TRAV8-4A0A0B4J246 113 aa15.97■□□□□ 0.15
NPLOC4-217ENST00000574897 SPAG11BQ08648 103 aa15.97■□□□□ 0.15
NPLOC4-217ENST00000574897 UNQ6190/PRO20217Q6UXQ8 127 aa15.97■□□□□ 0.15
NPLOC4-217ENST00000574897 OR13C6PQ8NH95 151 aa15.96■□□□□ 0.15
NPLOC4-217ENST00000574897 H3BNG1 76 aa15.95■□□□□ 0.14
NPLOC4-217ENST00000574897 ESRGQ1W209 222 aa15.95■□□□□ 0.14
NPLOC4-217ENST00000574897 CXCL5P42830 114 aa15.95■□□□□ 0.14
NPLOC4-217ENST00000574897 C11orf45Q8TAV5 145 aa15.94■□□□□ 0.14
NPLOC4-217ENST00000574897 KLK5Q9Y337 293 aaPredicted RBP15.94■□□□□ 0.14
NPLOC4-217ENST00000574897 DEFB131BA0A096LNP1 70 aa15.93■□□□□ 0.14
NPLOC4-217ENST00000574897 Q8NDZ9 215 aa15.92■□□□□ 0.14
NPLOC4-217ENST00000574897 Q9HAA7 133 aa15.92■□□□□ 0.14
NPLOC4-217ENST00000574897 A0A087WYN8 130 aa15.9■□□□□ 0.14
NPLOC4-217ENST00000574897 TRACP01848 142 aa15.9■□□□□ 0.14
NPLOC4-217ENST00000574897 COX17Q14061 63 aa15.9■□□□□ 0.14
NPLOC4-217ENST00000574897 XGP55808 180 aa15.89■□□□□ 0.13
NPLOC4-217ENST00000574897 MRAPQ8TCY5 172 aa15.89■□□□□ 0.13
NPLOC4-217ENST00000574897 MT-ATP8P03928 68 aa15.87■□□□□ 0.13
NPLOC4-217ENST00000574897 MGAM2Q2M2H8 2515 aa15.87■□□□□ 0.13
NPLOC4-217ENST00000574897 C22orf24Q9Y442 160 aa15.86■□□□□ 0.13
NPLOC4-217ENST00000574897 KRTAP26-1Q6PEX3 210 aa15.85■□□□□ 0.13
NPLOC4-217ENST00000574897 BAALC-AS2P0C853 105 aa15.85■□□□□ 0.13
NPLOC4-217ENST00000574897 K7EIL1 84 aa15.84■□□□□ 0.13
NPLOC4-217ENST00000574897 NCR3O14931 201 aa15.84■□□□□ 0.13
NPLOC4-217ENST00000574897 HIGD2BQ4VC39 106 aa15.84■□□□□ 0.13
NPLOC4-217ENST00000574897 HUWE1Q7Z6Z7 4374 aaKnown RBP15.84■□□□□ 0.13
NPLOC4-217ENST00000574897 DEFB121Q5J5C9 76 aa15.83■□□□□ 0.12
NPLOC4-217ENST00000574897 C6orf48Q9UBA6 75 aa15.82■□□□□ 0.12
NPLOC4-217ENST00000574897 NDUFC2O95298 119 aa15.8■□□□□ 0.12
NPLOC4-217ENST00000574897 LECT2O14960 151 aa15.79■□□□□ 0.12
NPLOC4-217ENST00000574897 H0YGX0 51 aa15.78■□□□□ 0.12
NPLOC4-217ENST00000574897 TM2D3Q9BRN9 247 aa15.78■□□□□ 0.12
NPLOC4-217ENST00000574897 SLPIP03973 132 aa15.76■□□□□ 0.11
NPLOC4-217ENST00000574897 C15orf56Q8N910 161 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms