RNA–Protein interactions for RNA: ENST00000574217.1

PRPF8-210, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 310 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-210ENST00000574217 C6orf226Q5I0X4 101 aa4.39□□□□□ -1.71
PRPF8-210ENST00000574217 Q8N814 137 aa4.39□□□□□ -1.71
PRPF8-210ENST00000574217 COX7B2Q8TF08 81 aa4.39□□□□□ -1.71
PRPF8-210ENST00000574217 LINC00526Q96FQ7 95 aa4.39□□□□□ -1.71
PRPF8-210ENST00000574217 C2orf48Q96LS8 159 aa4.39□□□□□ -1.71
PRPF8-210ENST00000574217 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.38□□□□□ -1.71
PRPF8-210ENST00000574217 F8WDY8 70 aa4.38□□□□□ -1.71
PRPF8-210ENST00000574217 J3QQQ9 107 aa4.38□□□□□ -1.71
PRPF8-210ENST00000574217 LEPROTO15243 131 aa4.38□□□□□ -1.71
PRPF8-210ENST00000574217 FUSP35637 526 aaKnown RBP eCLIP4.38□□□□□ -1.71
PRPF8-210ENST00000574217 CXCL5P42830 114 aa4.38□□□□□ -1.71
PRPF8-210ENST00000574217 KRTAP10-2P60368 255 aa4.38□□□□□ -1.71
PRPF8-210ENST00000574217 KIAA0087Q14695 138 aa4.38□□□□□ -1.71
PRPF8-210ENST00000574217 MAJINQ3KP22 176 aa4.38□□□□□ -1.71
PRPF8-210ENST00000574217 SFTA2Q6UW10 78 aa4.38□□□□□ -1.71
PRPF8-210ENST00000574217 NTN5Q8WTR8 489 aaPredicted RBP4.38□□□□□ -1.71
PRPF8-210ENST00000574217 PLEKHB2Q96CS7 222 aa4.38□□□□□ -1.71
PRPF8-210ENST00000574217 CAMK2N2Q96S95 79 aa4.38□□□□□ -1.71
PRPF8-210ENST00000574217 DYNC1H1Q14204 4646 aaKnown RBP4.37□□□□□ -1.71
PRPF8-210ENST00000574217 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.37□□□□□ -1.71
PRPF8-210ENST00000574217 FAM229AH3BQW9 127 aa4.37□□□□□ -1.71
PRPF8-210ENST00000574217 NDUFA1O15239 70 aa4.37□□□□□ -1.71
PRPF8-210ENST00000574217 LGALS3P17931 250 aaKnown RBP4.37□□□□□ -1.71
PRPF8-210ENST00000574217 NMUP48645 174 aa4.37□□□□□ -1.71
PRPF8-210ENST00000574217 CNBPP62633 177 aaKnown RBP4.37□□□□□ -1.71
PRPF8-210ENST00000574217 SYCNQ0VAF6 134 aa4.37□□□□□ -1.71
PRPF8-210ENST00000574217 ANKRD39Q53RE8 183 aa4.37□□□□□ -1.71
PRPF8-210ENST00000574217 C2orf82Q6UX34 121 aa4.37□□□□□ -1.71
PRPF8-210ENST00000574217 VAMP8Q9BV40 100 aa4.37□□□□□ -1.71
PRPF8-210ENST00000574217 DNAH5Q8TE73 4624 aa4.36□□□□□ -1.71
PRPF8-210ENST00000574217 IGKV2D-26A0A0A0MRZ7 120 aa4.36□□□□□ -1.71
PRPF8-210ENST00000574217 MYMXA0A1B0GTQ4 84 aa4.36□□□□□ -1.71
PRPF8-210ENST00000574217 SLPIP03973 132 aa4.36□□□□□ -1.71
PRPF8-210ENST00000574217 SMIM6P0DI80 62 aa4.36□□□□□ -1.71
PRPF8-210ENST00000574217 TSPEAR-AS2P59090 65 aa4.36□□□□□ -1.71
PRPF8-210ENST00000574217 SPATA45Q537H7 98 aa4.36□□□□□ -1.71
PRPF8-210ENST00000574217 UNQ6190/PRO20217Q6UXQ8 127 aa4.36□□□□□ -1.71
PRPF8-210ENST00000574217 Q6ZRU5 148 aa4.36□□□□□ -1.71
PRPF8-210ENST00000574217 CARD19Q96LW7 228 aa4.36□□□□□ -1.71
PRPF8-210ENST00000574217 NDUFA12Q9UI09 145 aa4.36□□□□□ -1.71
PRPF8-210ENST00000574217 PAM16Q9Y3D7 125 aa4.36□□□□□ -1.71
PRPF8-210ENST00000574217 IGLV5-52A0A0A0MRZ9 124 aa4.35□□□□□ -1.71
PRPF8-210ENST00000574217 TRBV30A0A0K0K1B3 111 aa4.35□□□□□ -1.71
PRPF8-210ENST00000574217 TMEM238LA0A1B0GVL6 79 aa4.35□□□□□ -1.71
PRPF8-210ENST00000574217 ZNF815PA8K554 130 aa4.35□□□□□ -1.71
PRPF8-210ENST00000574217 C16orf90A8MZG2 172 aa4.35□□□□□ -1.71
PRPF8-210ENST00000574217 HERV-K104P63124 156 aa4.35□□□□□ -1.71
PRPF8-210ENST00000574217 S100A12P80511 92 aa4.35□□□□□ -1.71
PRPF8-210ENST00000574217 C10orf25Q5T742 122 aa4.35□□□□□ -1.71
PRPF8-210ENST00000574217 CDPF1Q6NVV7 123 aa4.35□□□□□ -1.71
PRPF8-210ENST00000574217 ZNF625Q96I27 306 aaPredicted RBP4.35□□□□□ -1.71
PRPF8-210ENST00000574217 RNF151Q2KHN1 245 aa4.34□□□□□ -1.71
PRPF8-210ENST00000574217 C9orf163Q8N9P6 203 aa4.34□□□□□ -1.71
PRPF8-210ENST00000574217 TTTY13Q9BZ97 58 aa4.34□□□□□ -1.71
PRPF8-210ENST00000574217 C6orf48Q9UBA6 75 aa4.34□□□□□ -1.71
PRPF8-210ENST00000574217 PKHD1P08F94 4074 aa4.34□□□□□ -1.72
PRPF8-210ENST00000574217 LINC00587B1AMM8 73 aa4.33□□□□□ -1.72
PRPF8-210ENST00000574217 C9orf116Q5BN46 136 aaPredicted RBP4.33□□□□□ -1.72
PRPF8-210ENST00000574217 MEIG1Q5JSS6 88 aa4.33□□□□□ -1.72
PRPF8-210ENST00000574217 SCGB1D4Q6XE38 83 aa4.33□□□□□ -1.72
PRPF8-210ENST00000574217 PCP2Q8IVA1 136 aa4.33□□□□□ -1.72
PRPF8-210ENST00000574217 ERG28Q9UKR5 140 aa4.33□□□□□ -1.72
PRPF8-210ENST00000574217 PKIGQ9Y2B9 76 aa4.33□□□□□ -1.72
PRPF8-210ENST00000574217 LRP1BQ9NZR2 4599 aa4.32□□□□□ -1.72
PRPF8-210ENST00000574217 A0A0J9YXY3 114 aa4.32□□□□□ -1.72
PRPF8-210ENST00000574217 LOC107984640A0A0U1RRK4 108 aa4.32□□□□□ -1.72
PRPF8-210ENST00000574217 NDUFC2-KCTD14E9PQ53 114 aa4.32□□□□□ -1.72
PRPF8-210ENST00000574217 COX8AP10176 69 aa4.32□□□□□ -1.72
PRPF8-210ENST00000574217 PFN2P35080 140 aa4.32□□□□□ -1.72
PRPF8-210ENST00000574217 RPL18AQ02543 176 aaKnown RBP4.32□□□□□ -1.72
PRPF8-210ENST00000574217 CIRBPQ14011 172 aaKnown RBP4.32□□□□□ -1.72
PRPF8-210ENST00000574217 COX17Q14061 63 aa4.32□□□□□ -1.72
PRPF8-210ENST00000574217 LINC01620Q4KN68 170 aa4.32□□□□□ -1.72
PRPF8-210ENST00000574217 C14orf144Q96I85 54 aa4.32□□□□□ -1.72
PRPF8-210ENST00000574217 C12orf57Q99622 126 aa4.32□□□□□ -1.72
PRPF8-210ENST00000574217 RYR1P21817 5038 aa4.31□□□□□ -1.72
PRPF8-210ENST00000574217 TLX1NBP0CAT3 122 aa4.31□□□□□ -1.72
PRPF8-210ENST00000574217 SMIM13P0DJ93 91 aa4.31□□□□□ -1.72
PRPF8-210ENST00000574217 GCSHP23434 173 aa4.31□□□□□ -1.72
PRPF8-210ENST00000574217 LINC00158P58513 81 aa4.31□□□□□ -1.72
PRPF8-210ENST00000574217 KRTAP10-1P60331 282 aa4.31□□□□□ -1.72
PRPF8-210ENST00000574217 SLC25A34Q6PIV7 304 aa4.31□□□□□ -1.72
PRPF8-210ENST00000574217 BOD1L2Q8IYS8 172 aa4.31□□□□□ -1.72
PRPF8-210ENST00000574217 KIAA1109Q2LD37 5005 aa4.31□□□□□ -1.72
PRPF8-210ENST00000574217 A0A0U1RRA0 63 aa4.3□□□□□ -1.72
PRPF8-210ENST00000574217 TMEM238C9JI98 176 aa4.3□□□□□ -1.72
PRPF8-210ENST00000574217 DLEU1O43261 78 aa4.3□□□□□ -1.72
PRPF8-210ENST00000574217 TIMM17BO60830 172 aa4.3□□□□□ -1.72
PRPF8-210ENST00000574217 GAGE2BQ13066 116 aa4.3□□□□□ -1.72
PRPF8-210ENST00000574217 GAGE2EQ4V326 116 aa4.3□□□□□ -1.72
PRPF8-210ENST00000574217 SDIM1Q6ZPB5 146 aa4.3□□□□□ -1.72
PRPF8-210ENST00000574217 Q6ZRP5 223 aa4.3□□□□□ -1.72
PRPF8-210ENST00000574217 LINC00518Q8N0U6 118 aa4.3□□□□□ -1.72
PRPF8-210ENST00000574217 GAGE2DQ9UEU5 116 aa4.3□□□□□ -1.72
PRPF8-210ENST00000574217 TP73-AS1Q9UF72 201 aa4.3□□□□□ -1.72
PRPF8-210ENST00000574217 A0A096LNI7 61 aa4.29□□□□□ -1.72
PRPF8-210ENST00000574217 IGKV2-24A0A0C4DH68 120 aa4.29□□□□□ -1.72
PRPF8-210ENST00000574217 PTTG1IPP53801 180 aa4.29□□□□□ -1.72
PRPF8-210ENST00000574217 MIR7-3HGQ8N6C7 128 aa4.29□□□□□ -1.72
PRPF8-210ENST00000574217 DAND5Q8N907 189 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms