RNA–Protein interactions for RNA: ENST00000573994.1

RPA1-206, Transcript of replication protein A1, humanhuman

TSL 2

Gene RPA1, Length 844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-206ENST00000573994 UBE2D1P51668 147 aa6.21□□□□□ -1.42
RPA1-206ENST00000573994 COX19Q49B96 90 aa6.21□□□□□ -1.42
RPA1-206ENST00000573994 LINC00173Q6ZV60 143 aa6.21□□□□□ -1.42
RPA1-206ENST00000573994 VCX2Q9H322 139 aa6.21□□□□□ -1.42
RPA1-206ENST00000573994 SEC11AP67812 179 aa6.2□□□□□ -1.42
RPA1-206ENST00000573994 C9orf116Q5BN46 136 aaPredicted RBP6.2□□□□□ -1.42
RPA1-206ENST00000573994 UNQ6190/PRO20217Q6UXQ8 127 aa6.2□□□□□ -1.42
RPA1-206ENST00000573994 Q6ZRP5 223 aa6.2□□□□□ -1.42
RPA1-206ENST00000573994 GNB1LQ9BYB4 327 aa6.2□□□□□ -1.42
RPA1-206ENST00000573994 C6orf48Q9UBA6 75 aa6.2□□□□□ -1.42
RPA1-206ENST00000573994 TLX1NBP0CAT3 122 aa6.19□□□□□ -1.42
RPA1-206ENST00000573994 C2orf82Q6UX34 121 aa6.19□□□□□ -1.42
RPA1-206ENST00000573994 PHF5AQ7RTV0 110 aaKnown RBP6.19□□□□□ -1.42
RPA1-206ENST00000573994 FAM19A3Q7Z5A8 133 aa6.19□□□□□ -1.42
RPA1-206ENST00000573994 AMELXQ99217 191 aa6.19□□□□□ -1.42
RPA1-206ENST00000573994 UBR4Q5T4S7 5183 aa6.19□□□□□ -1.42
RPA1-206ENST00000573994 FAM168BA1KXE4 195 aa6.18□□□□□ -1.42
RPA1-206ENST00000573994 IGIPA6NJ69 53 aa6.18□□□□□ -1.42
RPA1-206ENST00000573994 MT-ND6P03923 174 aa6.18□□□□□ -1.42
RPA1-206ENST00000573994 KIAA0087Q14695 138 aa6.18□□□□□ -1.42
RPA1-206ENST00000573994 RHEBQ15382 184 aa6.18□□□□□ -1.42
RPA1-206ENST00000573994 GAGE2EQ4V326 116 aa6.18□□□□□ -1.42
RPA1-206ENST00000573994 SPINK6Q6UWN8 80 aa6.18□□□□□ -1.42
RPA1-206ENST00000573994 FAM19A5Q7Z5A7 132 aaPredicted RBP6.18□□□□□ -1.42
RPA1-206ENST00000573994 TIMM17AQ99595 171 aa6.18□□□□□ -1.42
RPA1-206ENST00000573994 GAGE2DQ9UEU5 116 aa6.18□□□□□ -1.42
RPA1-206ENST00000573994 TRBV30A0A0K0K1B3 111 aa6.17□□□□□ -1.42
RPA1-206ENST00000573994 HERVK_113P63121 156 aa6.17□□□□□ -1.42
RPA1-206ENST00000573994 C10orf91Q5T1B1 145 aa6.17□□□□□ -1.42
RPA1-206ENST00000573994 ERASQ7Z444 233 aa6.17□□□□□ -1.42
RPA1-206ENST00000573994 TOMM6Q96B49 74 aa6.17□□□□□ -1.42
RPA1-206ENST00000573994 LINC01546A6NGU7 62 aa6.16□□□□□ -1.42
RPA1-206ENST00000573994 ODF1Q14990 250 aa6.16□□□□□ -1.42
RPA1-206ENST00000573994 REG3GQ6UW15 175 aa6.16□□□□□ -1.42
RPA1-206ENST00000573994 PACRGQ96M98 296 aaPredicted RBP6.16□□□□□ -1.42
RPA1-206ENST00000573994 TOMM7Q9P0U1 55 aa6.16□□□□□ -1.42
RPA1-206ENST00000573994 PSORS1C2Q9UIG4 136 aa6.16□□□□□ -1.42
RPA1-206ENST00000573994 CARHSP1Q9Y2V2 147 aaKnown RBP6.16□□□□□ -1.42
RPA1-206ENST00000573994 PRSS2P07478 247 aa6.15□□□□□ -1.42
RPA1-206ENST00000573994 SCGB3A1Q96QR1 104 aa6.15□□□□□ -1.42
RPA1-206ENST00000573994 ALKBH7Q9BT30 221 aaPredicted RBP6.15□□□□□ -1.42
RPA1-206ENST00000573994 RPS10P5Q9NQ39 176 aa6.15□□□□□ -1.42
RPA1-206ENST00000573994 NDUFC2-KCTD14E9PQ53 114 aa6.14□□□□□ -1.43
RPA1-206ENST00000573994 CKS1BP61024 79 aa6.14□□□□□ -1.43
RPA1-206ENST00000573994 FABP9Q0Z7S8 132 aa6.14□□□□□ -1.43
RPA1-206ENST00000573994 SRSF9Q13242 221 aaKnown RBP eCLIP6.14□□□□□ -1.43
RPA1-206ENST00000573994 C6orf226Q5I0X4 101 aa6.14□□□□□ -1.43
RPA1-206ENST00000573994 C1orf137Q5JT78 98 aa6.14□□□□□ -1.43
RPA1-206ENST00000573994 KRTAP11-1Q8IUC1 163 aa6.14□□□□□ -1.43
RPA1-206ENST00000573994 Q8IZM0 81 aa6.14□□□□□ -1.43
RPA1-206ENST00000573994 LINC01600Q96MT4 127 aa6.14□□□□□ -1.43
RPA1-206ENST00000573994 GEMIN7Q9H840 131 aaKnown RBP6.14□□□□□ -1.43
RPA1-206ENST00000573994 CDKN2A-AS1Q9UH64 79 aa6.14□□□□□ -1.43
RPA1-206ENST00000573994 M0QXV9 152 aa6.13□□□□□ -1.43
RPA1-206ENST00000573994 C9orf129Q5T035 196 aaKnown RBP6.13□□□□□ -1.43
RPA1-206ENST00000573994 FA2HQ7L5A8 372 aa6.13□□□□□ -1.43
RPA1-206ENST00000573994 KRTAP7-1Q8IUC3 87 aa6.13□□□□□ -1.43
RPA1-206ENST00000573994 LINC00469Q8N7U9 141 aa6.13□□□□□ -1.43
RPA1-206ENST00000573994 LRP2P98164 4655 aa6.12□□□□□ -1.43
RPA1-206ENST00000573994 TINCRA0A1B0GVN0 87 aa6.12□□□□□ -1.43
RPA1-206ENST00000573994 CXCL5P42830 114 aa6.12□□□□□ -1.43
RPA1-206ENST00000573994 NDUFA5Q16718 116 aa6.12□□□□□ -1.43
RPA1-206ENST00000573994 SMCO4Q9NRQ5 59 aa6.12□□□□□ -1.43
RPA1-206ENST00000573994 SMIM1B2RUZ4 78 aa6.11□□□□□ -1.43
RPA1-206ENST00000573994 UBE2BP63146 152 aa6.11□□□□□ -1.43
RPA1-206ENST00000573994 CDIP1Q9H305 208 aa6.11□□□□□ -1.43
RPA1-206ENST00000573994 F8VRH5 84 aa6.1□□□□□ -1.43
RPA1-206ENST00000573994 SNAPINO95295 136 aa6.1□□□□□ -1.43
RPA1-206ENST00000573994 PMVKQ15126 192 aa6.1□□□□□ -1.43
RPA1-206ENST00000573994 PDZD11Q5EBL8 140 aa6.1□□□□□ -1.43
RPA1-206ENST00000573994 SVBPQ8N300 66 aa6.1□□□□□ -1.43
RPA1-206ENST00000573994 CST9LQ9H4G1 147 aa6.1□□□□□ -1.43
RPA1-206ENST00000573994 XAGE1AQ9HD64 81 aa6.1□□□□□ -1.43
RPA1-206ENST00000573994 IGLV5-45A0A087WSX0 123 aa6.09□□□□□ -1.43
RPA1-206ENST00000573994 APOC3P02656 99 aa6.09□□□□□ -1.43
RPA1-206ENST00000573994 IGLV7-43P04211 117 aa6.09□□□□□ -1.43
RPA1-206ENST00000573994 SPINK8P0C7L1 97 aa6.09□□□□□ -1.43
RPA1-206ENST00000573994 RAB5BP61020 215 aa6.09□□□□□ -1.43
RPA1-206ENST00000573994 TRAPPC1Q9Y5R8 145 aa6.09□□□□□ -1.43
RPA1-206ENST00000573994 H3BRM9 83 aa6.08□□□□□ -1.44
RPA1-206ENST00000573994 LINC00614P0C842 121 aa6.08□□□□□ -1.44
RPA1-206ENST00000573994 KRTAP10-8P60410 259 aa6.08□□□□□ -1.44
RPA1-206ENST00000573994 PMCHL1Q16048 86 aa6.08□□□□□ -1.44
RPA1-206ENST00000573994 COX7B2Q8TF08 81 aa6.08□□□□□ -1.44
RPA1-206ENST00000573994 DIRC1Q969H9 104 aa6.08□□□□□ -1.44
RPA1-206ENST00000573994 URB1-AS1Q96HZ7 61 aa6.08□□□□□ -1.44
RPA1-206ENST00000573994 A0A096LNJ9 63 aa6.07□□□□□ -1.44
RPA1-206ENST00000573994 NDUFA6P56556 154 aa6.07□□□□□ -1.44
RPA1-206ENST00000573994 LBHQ53QV2 105 aaPredicted RBP6.07□□□□□ -1.44
RPA1-206ENST00000573994 C18orf32Q8TCD1 76 aa6.07□□□□□ -1.44
RPA1-206ENST00000573994 C22orf24Q9Y442 160 aa6.06□□□□□ -1.44
RPA1-206ENST00000573994 H0Y9J4 135 aa6.05□□□□□ -1.44
RPA1-206ENST00000573994 ATP5LO75964 103 aa6.05□□□□□ -1.44
RPA1-206ENST00000573994 HBDP02042 147 aa6.05□□□□□ -1.44
RPA1-206ENST00000573994 SFTA2Q6UW10 78 aa6.05□□□□□ -1.44
RPA1-206ENST00000573994 TP73-AS1Q9UF72 201 aa6.05□□□□□ -1.44
RPA1-206ENST00000573994 NUPR1O60356 82 aa6.04□□□□□ -1.44
RPA1-206ENST00000573994 IGLC3P0DOY3 106 aa6.04□□□□□ -1.44
RPA1-206ENST00000573994 PRR26Q8N8Z3 221 aa6.04□□□□□ -1.44
RPA1-206ENST00000573994 ZNF22P17026 224 aaPredicted RBP6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms