RNA–Protein interactions for RNA: ENST00000573876.1

NPLOC4-214, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4 BASIC

Gene NPLOC4, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-214ENST00000573876 CKS1BP61024 79 aa8.37□□□□□ -1.07
NPLOC4-214ENST00000573876 SYCNQ0VAF6 134 aa8.37□□□□□ -1.07
NPLOC4-214ENST00000573876 C2orf82Q6UX34 121 aa8.37□□□□□ -1.07
NPLOC4-214ENST00000573876 Q8IZM0 81 aa8.37□□□□□ -1.07
NPLOC4-214ENST00000573876 C2orf48Q96LS8 159 aa8.37□□□□□ -1.07
NPLOC4-214ENST00000573876 AKR1D1P51857 326 aa8.36□□□□□ -1.07
NPLOC4-214ENST00000573876 KRTAP10-1P60331 282 aa8.36□□□□□ -1.07
NPLOC4-214ENST00000573876 HERVK_113P61574 105 aa8.36□□□□□ -1.07
NPLOC4-214ENST00000573876 UNQ6190/PRO20217Q6UXQ8 127 aa8.36□□□□□ -1.07
NPLOC4-214ENST00000573876 C9orf163Q8N9P6 203 aa8.36□□□□□ -1.07
NPLOC4-214ENST00000573876 CARD19Q96LW7 228 aa8.36□□□□□ -1.07
NPLOC4-214ENST00000573876 PKIGQ9Y2B9 76 aa8.36□□□□□ -1.07
NPLOC4-214ENST00000573876 F8WDY8 70 aa8.35□□□□□ -1.07
NPLOC4-214ENST00000573876 LINC01620Q4KN68 170 aa8.35□□□□□ -1.07
NPLOC4-214ENST00000573876 C10orf25Q5T742 122 aa8.35□□□□□ -1.07
NPLOC4-214ENST00000573876 Q6ZRU5 148 aa8.35□□□□□ -1.07
NPLOC4-214ENST00000573876 NDUFA1O15239 70 aa8.34□□□□□ -1.07
NPLOC4-214ENST00000573876 LEPROTO15243 131 aa8.34□□□□□ -1.07
NPLOC4-214ENST00000573876 RYR1P21817 5038 aa8.33□□□□□ -1.08
NPLOC4-214ENST00000573876 JOSD1Q15040 202 aaPredicted RBP8.33□□□□□ -1.08
NPLOC4-214ENST00000573876 PLEKHB2Q96CS7 222 aa8.33□□□□□ -1.08
NPLOC4-214ENST00000573876 E9PLD3 99 aa8.32□□□□□ -1.08
NPLOC4-214ENST00000573876 J3QQQ9 107 aa8.32□□□□□ -1.08
NPLOC4-214ENST00000573876 MAJINQ3KP22 176 aa8.32□□□□□ -1.08
NPLOC4-214ENST00000573876 LGALS3P17931 250 aaKnown RBP8.31□□□□□ -1.08
NPLOC4-214ENST00000573876 CXCL5P42830 114 aa8.31□□□□□ -1.08
NPLOC4-214ENST00000573876 C9orf116Q5BN46 136 aaPredicted RBP8.31□□□□□ -1.08
NPLOC4-214ENST00000573876 ZNF625Q96I27 306 aaPredicted RBP8.31□□□□□ -1.08
NPLOC4-214ENST00000573876 KIAA1109Q2LD37 5005 aa8.3□□□□□ -1.08
NPLOC4-214ENST00000573876 HSPG2P98160 4391 aa8.3□□□□□ -1.08
NPLOC4-214ENST00000573876 HSBP1L1C9JCN9 74 aa8.3□□□□□ -1.08
NPLOC4-214ENST00000573876 CDK2AP2O75956 126 aa8.3□□□□□ -1.08
NPLOC4-214ENST00000573876 TSPEAR-AS2P59090 65 aa8.3□□□□□ -1.08
NPLOC4-214ENST00000573876 RNF151Q2KHN1 245 aa8.3□□□□□ -1.08
NPLOC4-214ENST00000573876 ANKRD39Q53RE8 183 aa8.3□□□□□ -1.08
NPLOC4-214ENST00000573876 SDIM1Q6ZPB5 146 aa8.3□□□□□ -1.08
NPLOC4-214ENST00000573876 C6orf48Q9UBA6 75 aa8.3□□□□□ -1.08
NPLOC4-214ENST00000573876 NDUFA12Q9UI09 145 aa8.3□□□□□ -1.08
NPLOC4-214ENST00000573876 IGKV2D-26A0A0A0MRZ7 120 aa8.29□□□□□ -1.08
NPLOC4-214ENST00000573876 TRBV30A0A0K0K1B3 111 aa8.29□□□□□ -1.08
NPLOC4-214ENST00000573876 PYY3Q5JQD4 70 aa8.29□□□□□ -1.08
NPLOC4-214ENST00000573876 LOC107984640A0A0U1RRK4 108 aa8.28□□□□□ -1.08
NPLOC4-214ENST00000573876 MYMXA0A1B0GTQ4 84 aa8.28□□□□□ -1.08
NPLOC4-214ENST00000573876 NMUP48645 174 aa8.28□□□□□ -1.08
NPLOC4-214ENST00000573876 DPH3Q96FX2 82 aa8.28□□□□□ -1.08
NPLOC4-214ENST00000573876 LOC105371267A0A1B0GV96 52 aa8.27□□□□□ -1.09
NPLOC4-214ENST00000573876 SFTA2Q6UW10 78 aa8.27□□□□□ -1.09
NPLOC4-214ENST00000573876 Q6ZSA8 131 aa8.27□□□□□ -1.09
NPLOC4-214ENST00000573876 FAM30AQ9NZY2 134 aa8.27□□□□□ -1.09
NPLOC4-214ENST00000573876 PFN2P35080 140 aa8.26□□□□□ -1.09
NPLOC4-214ENST00000573876 HERV-K104P63124 156 aa8.26□□□□□ -1.09
NPLOC4-214ENST00000573876 GAGE2BQ13066 116 aa8.26□□□□□ -1.09
NPLOC4-214ENST00000573876 TTTY13Q9BZ97 58 aa8.26□□□□□ -1.09
NPLOC4-214ENST00000573876 LINC00474Q9P2X8 69 aa8.26□□□□□ -1.09
NPLOC4-214ENST00000573876 IGKV2-24A0A0C4DH68 120 aa8.25□□□□□ -1.09
NPLOC4-214ENST00000573876 A0A0U1RRA0 63 aa8.25□□□□□ -1.09
NPLOC4-214ENST00000573876 RPL18AQ02543 176 aaKnown RBP8.25□□□□□ -1.09
NPLOC4-214ENST00000573876 ZNF815PA8K554 130 aa8.24□□□□□ -1.09
NPLOC4-214ENST00000573876 NDUFC2-KCTD14E9PQ53 114 aa8.24□□□□□ -1.09
NPLOC4-214ENST00000573876 TLX1NBP0CAT3 122 aa8.24□□□□□ -1.09
NPLOC4-214ENST00000573876 XGP55808 180 aa8.24□□□□□ -1.09
NPLOC4-214ENST00000573876 LINC00158P58513 81 aa8.24□□□□□ -1.09
NPLOC4-214ENST00000573876 GAGE2EQ4V326 116 aa8.24□□□□□ -1.09
NPLOC4-214ENST00000573876 Q6ZRP5 223 aa8.24□□□□□ -1.09
NPLOC4-214ENST00000573876 PCP2Q8IVA1 136 aa8.24□□□□□ -1.09
NPLOC4-214ENST00000573876 VAMP8Q9BV40 100 aa8.24□□□□□ -1.09
NPLOC4-214ENST00000573876 GAGE2DQ9UEU5 116 aa8.24□□□□□ -1.09
NPLOC4-214ENST00000573876 ERG28Q9UKR5 140 aa8.24□□□□□ -1.09
NPLOC4-214ENST00000573876 PAM16Q9Y3D7 125 aa8.24□□□□□ -1.09
NPLOC4-214ENST00000573876 HERC2O95714 4834 aa8.24□□□□□ -1.09
NPLOC4-214ENST00000573876 A0A096LNI7 61 aa8.23□□□□□ -1.09
NPLOC4-214ENST00000573876 CHTF8P0CG12 524 aa8.23□□□□□ -1.09
NPLOC4-214ENST00000573876 SMIM13P0DJ93 91 aa8.23□□□□□ -1.09
NPLOC4-214ENST00000573876 PTTG1IPP53801 180 aa8.23□□□□□ -1.09
NPLOC4-214ENST00000573876 SPATA45Q537H7 98 aa8.23□□□□□ -1.09
NPLOC4-214ENST00000573876 MEIG1Q5JSS6 88 aa8.23□□□□□ -1.09
NPLOC4-214ENST00000573876 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.23□□□□□ -1.09
NPLOC4-214ENST00000573876 FAT1Q14517 4588 aa8.23□□□□□ -1.09
NPLOC4-214ENST00000573876 A0A0J9YXY3 114 aa8.22□□□□□ -1.09
NPLOC4-214ENST00000573876 LINC00587B1AMM8 73 aa8.22□□□□□ -1.09
NPLOC4-214ENST00000573876 HAMPP81172 84 aa8.22□□□□□ -1.09
NPLOC4-214ENST00000573876 CIRBPQ14011 172 aaKnown RBP8.22□□□□□ -1.09
NPLOC4-214ENST00000573876 COX17Q14061 63 aa8.22□□□□□ -1.09
NPLOC4-214ENST00000573876 SCXQ7RTU7 201 aa8.22□□□□□ -1.09
NPLOC4-214ENST00000573876 SPACA4Q8TDM5 124 aa8.22□□□□□ -1.09
NPLOC4-214ENST00000573876 PANO1I0J062 215 aa8.21□□□□□ -1.1
NPLOC4-214ENST00000573876 CIRBP-AS1Q8TBR5 109 aa8.21□□□□□ -1.1
NPLOC4-214ENST00000573876 A0A087WYN8 130 aa8.2□□□□□ -1.1
NPLOC4-214ENST00000573876 C14orf144Q96I85 54 aa8.2□□□□□ -1.1
NPLOC4-214ENST00000573876 XAGE1AQ9HD64 81 aa8.2□□□□□ -1.1
NPLOC4-214ENST00000573876 S100A12P80511 92 aa8.19□□□□□ -1.1
NPLOC4-214ENST00000573876 SCGB1D4Q6XE38 83 aa8.19□□□□□ -1.1
NPLOC4-214ENST00000573876 COX8AP10176 69 aa8.18□□□□□ -1.1
NPLOC4-214ENST00000573876 ADAMTSL4-AS1Q5T5F5 129 aa8.18□□□□□ -1.1
NPLOC4-214ENST00000573876 MIR7-3HGQ8N6C7 128 aa8.18□□□□□ -1.1
NPLOC4-214ENST00000573876 PLAC8Q9NZF1 115 aa8.18□□□□□ -1.1
NPLOC4-214ENST00000573876 VPS13BQ7Z7G8 4022 aa8.18□□□□□ -1.1
NPLOC4-214ENST00000573876 SMR3BP02814 79 aaPredicted RBP8.17□□□□□ -1.1
NPLOC4-214ENST00000573876 C9orf129Q5T035 196 aaKnown RBP8.17□□□□□ -1.1
NPLOC4-214ENST00000573876 BOD1L2Q8IYS8 172 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms