RNA–Protein interactions for RNA: ENST00000573710.7

CACNA1A-202, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,569 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-202ENST00000573710 IMUPQ9GZP8 106 aa11.55□□□□□ -0.56
CACNA1A-202ENST00000573710 CHTF8P0CG12 524 aa11.54□□□□□ -0.56
CACNA1A-202ENST00000573710 NTM-AS1Q6ZSK4 140 aa11.54□□□□□ -0.56
CACNA1A-202ENST00000573710 Q8NA96 180 aa11.54□□□□□ -0.56
CACNA1A-202ENST00000573710 LRRC75A-AS1Q8N1F1 130 aa11.54□□□□□ -0.56
CACNA1A-202ENST00000573710 Q6ZTC4 211 aa11.54□□□□□ -0.56
CACNA1A-202ENST00000573710 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.53□□□□□ -0.56
CACNA1A-202ENST00000573710 TMEM254Q8TBM7 123 aa11.53□□□□□ -0.56
CACNA1A-202ENST00000573710 Q8N3U1 123 aa11.53□□□□□ -0.56
CACNA1A-202ENST00000573710 MOBPQ13875 183 aa11.52□□□□□ -0.57
CACNA1A-202ENST00000573710 IGFL2Q6UWQ7 119 aa11.52□□□□□ -0.57
CACNA1A-202ENST00000573710 LIMD2Q9BT23 127 aa11.52□□□□□ -0.57
CACNA1A-202ENST00000573710 MRPS36P82909 103 aaKnown RBP11.51□□□□□ -0.57
CACNA1A-202ENST00000573710 COX17Q14061 63 aa11.51□□□□□ -0.57
CACNA1A-202ENST00000573710 ODF3Q96PU9 254 aa11.51□□□□□ -0.57
CACNA1A-202ENST00000573710 Q8N814 137 aa11.51□□□□□ -0.57
CACNA1A-202ENST00000573710 LINC01554Q52M75 96 aa11.5□□□□□ -0.57
CACNA1A-202ENST00000573710 MRGPRG-AS1Q2M3A8 158 aa11.5□□□□□ -0.57
CACNA1A-202ENST00000573710 ZNF702PQ9H963 129 aa11.5□□□□□ -0.57
CACNA1A-202ENST00000573710 MBD6Q96DN6 1003 aa11.49□□□□□ -0.57
CACNA1A-202ENST00000573710 TSHBP01222 138 aa11.49□□□□□ -0.57
CACNA1A-202ENST00000573710 FAM229AH3BQW9 127 aa11.48□□□□□ -0.57
CACNA1A-202ENST00000573710 LINC00242Q5T6M2 205 aa11.47□□□□□ -0.57
CACNA1A-202ENST00000573710 C6orf48Q9UBA6 75 aa11.47□□□□□ -0.57
CACNA1A-202ENST00000573710 EDN2P20800 178 aa11.46□□□□□ -0.58
CACNA1A-202ENST00000573710 ZFYVE26Q68DK2 2539 aa11.46□□□□□ -0.58
CACNA1A-202ENST00000573710 CRIP1P50238 77 aa11.45□□□□□ -0.58
CACNA1A-202ENST00000573710 FSTL3O95633 263 aa11.44□□□□□ -0.58
CACNA1A-202ENST00000573710 C8orf87E5RJ46 101 aa11.43□□□□□ -0.58
CACNA1A-202ENST00000573710 A0A1W2PNU3 283 aaPredicted RBP11.43□□□□□ -0.58
CACNA1A-202ENST00000573710 RNF185Q96GF1 192 aa11.43□□□□□ -0.58
CACNA1A-202ENST00000573710 Q96NJ1 140 aa11.43□□□□□ -0.58
CACNA1A-202ENST00000573710 SMIM29Q86T20 159 aa11.43□□□□□ -0.58
CACNA1A-202ENST00000573710 NRACQ8N912 160 aa11.43□□□□□ -0.58
CACNA1A-202ENST00000573710 ACACBO00763 2458 aa11.42□□□□□ -0.58
CACNA1A-202ENST00000573710 FLG2Q5D862 2391 aaPredicted RBP11.42□□□□□ -0.58
CACNA1A-202ENST00000573710 CACNA1AO00555 2505 aa11.41□□□□□ -0.58
CACNA1A-202ENST00000573710 Q8IZM0 81 aa11.41□□□□□ -0.58
CACNA1A-202ENST00000573710 Q6JHZ5 121 aa11.41□□□□□ -0.58
CACNA1A-202ENST00000573710 Q8N6K4 173 aa11.41□□□□□ -0.58
CACNA1A-202ENST00000573710 C9orf129Q5T035 196 aaKnown RBP11.4□□□□□ -0.59
CACNA1A-202ENST00000573710 PSMG3-AS1Q96PY0 264 aa11.4□□□□□ -0.59
CACNA1A-202ENST00000573710 CRIPTQ9P021 101 aa11.4□□□□□ -0.59
CACNA1A-202ENST00000573710 C16orf90A8MZG2 172 aa11.39□□□□□ -0.59
CACNA1A-202ENST00000573710 LINC00313P59037 77 aa11.39□□□□□ -0.59
CACNA1A-202ENST00000573710 TYMSOSQ8TAI1 123 aa11.39□□□□□ -0.59
CACNA1A-202ENST00000573710 CDC42SE2Q9NRR3 84 aa11.39□□□□□ -0.59
CACNA1A-202ENST00000573710 PRR9Q5T870 116 aa11.39□□□□□ -0.59
CACNA1A-202ENST00000573710 IGLV4-60A0A075B6I1 120 aa11.38□□□□□ -0.59
CACNA1A-202ENST00000573710 COL4A3Q01955 1670 aa11.37□□□□□ -0.59
CACNA1A-202ENST00000573710 TLN1Q9Y490 2541 aaKnown RBP11.37□□□□□ -0.59
CACNA1A-202ENST00000573710 TLN2Q9Y4G6 2542 aa11.37□□□□□ -0.59
CACNA1A-202ENST00000573710 GAS8-AS1O95177 125 aa11.36□□□□□ -0.59
CACNA1A-202ENST00000573710 C4orf26Q17RF5 130 aa11.36□□□□□ -0.59
CACNA1A-202ENST00000573710 SMCR5Q8TEV8 140 aa11.36□□□□□ -0.59
CACNA1A-202ENST00000573710 KRTAP27-1Q3LI81 207 aa11.35□□□□□ -0.59
CACNA1A-202ENST00000573710 C1orf229Q6ZS94 237 aaPredicted RBP11.34□□□□□ -0.59
CACNA1A-202ENST00000573710 RPL37AP61513 92 aaKnown RBP11.33□□□□□ -0.6
CACNA1A-202ENST00000573710 CR1P17927 2039 aa11.33□□□□□ -0.6
CACNA1A-202ENST00000573710 A0A0D9SG42 100 aa11.33□□□□□ -0.6
CACNA1A-202ENST00000573710 IGLV6-57P01721 117 aa11.33□□□□□ -0.6
CACNA1A-202ENST00000573710 EGFEM1PQ0D2K5 195 aa11.33□□□□□ -0.6
CACNA1A-202ENST00000573710 FBXL19-AS1Q494R0 122 aa11.32□□□□□ -0.6
CACNA1A-202ENST00000573710 YPEL4Q96NS1 127 aa11.32□□□□□ -0.6
CACNA1A-202ENST00000573710 FN1P02751 2386 aaKnown RBP11.32□□□□□ -0.6
CACNA1A-202ENST00000573710 KIAA0087Q14695 138 aa11.31□□□□□ -0.6
CACNA1A-202ENST00000573710 FAM19A4Q96LR4 140 aa11.31□□□□□ -0.6
CACNA1A-202ENST00000573710 C9orf92A6NGG3 77 aa11.29□□□□□ -0.6
CACNA1A-202ENST00000573710 PCSK5Q92824 1860 aa11.29□□□□□ -0.6
CACNA1A-202ENST00000573710 WDR87Q6ZQQ6 2873 aa11.28□□□□□ -0.6
CACNA1A-202ENST00000573710 Q6ZRU5 148 aa11.28□□□□□ -0.6
CACNA1A-202ENST00000573710 KRTAP10-9P60411 292 aa11.28□□□□□ -0.6
CACNA1A-202ENST00000573710 C22orf24Q9Y442 160 aa11.28□□□□□ -0.6
CACNA1A-202ENST00000573710 ZNF580Q9UK33 172 aa11.27□□□□□ -0.61
CACNA1A-202ENST00000573710 LINC01600Q96MT4 127 aa11.25□□□□□ -0.61
CACNA1A-202ENST00000573710 COL4A4P53420 1690 aaPredicted RBP11.25□□□□□ -0.61
CACNA1A-202ENST00000573710 CXCL6P80162 114 aa11.25□□□□□ -0.61
CACNA1A-202ENST00000573710 C2orf91Q6ZV80 131 aa11.25□□□□□ -0.61
CACNA1A-202ENST00000573710 COL27A1Q8IZC6 1860 aaPredicted RBP11.25□□□□□ -0.61
CACNA1A-202ENST00000573710 LYPD5Q6UWN5 251 aa11.24□□□□□ -0.61
CACNA1A-202ENST00000573710 C11orf21Q9P2W6 132 aa11.23□□□□□ -0.61
CACNA1A-202ENST00000573710 PHF5AQ7RTV0 110 aaKnown RBP11.23□□□□□ -0.61
CACNA1A-202ENST00000573710 ADAMTSL4-AS1Q5T5F5 129 aa11.22□□□□□ -0.61
CACNA1A-202ENST00000573710 C11orf71Q6IPW1 123 aa11.22□□□□□ -0.61
CACNA1A-202ENST00000573710 LUZP6Q538Z0 58 aa11.21□□□□□ -0.61
CACNA1A-202ENST00000573710 ZNF575Q86XF7 245 aa11.21□□□□□ -0.62
CACNA1A-202ENST00000573710 ANKHD1Q8IWZ3 2542 aaKnown RBP11.21□□□□□ -0.62
CACNA1A-202ENST00000573710 AVPP01185 164 aa11.2□□□□□ -0.62
CACNA1A-202ENST00000573710 LINC00846Q9NV44 126 aa11.2□□□□□ -0.62
CACNA1A-202ENST00000573710 SMIM1B2RUZ4 78 aa11.2□□□□□ -0.62
CACNA1A-202ENST00000573710 CSNK1G2-AS1Q8NCQ2 148 aa11.19□□□□□ -0.62
CACNA1A-202ENST00000573710 ODF3L2Q3SX64 289 aa11.18□□□□□ -0.62
CACNA1A-202ENST00000573710 KLLNB2CW77 178 aa11.18□□□□□ -0.62
CACNA1A-202ENST00000573710 FHL3Q13643 280 aa11.18□□□□□ -0.62
CACNA1A-202ENST00000573710 MUC7Q8TAX7 377 aa11.18□□□□□ -0.62
CACNA1A-202ENST00000573710 PKD1L2Q7Z442 2459 aa11.18□□□□□ -0.62
CACNA1A-202ENST00000573710 GOLGB1Q14789 3259 aaKnown RBP11.17□□□□□ -0.62
CACNA1A-202ENST00000573710 NHLRC4P0CG21 123 aaPredicted RBP11.17□□□□□ -0.62
CACNA1A-202ENST00000573710 WIPF1O43516 503 aa11.17□□□□□ -0.62
CACNA1A-202ENST00000573710 CDSNQ15517 529 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms