RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 MYMXA0A1B0GTQ4 84 aa10.12□□□□□ -0.79
HERPUD1-219ENST00000570273 ZNF625Q96I27 306 aaPredicted RBP10.12□□□□□ -0.79
HERPUD1-219ENST00000570273 C2orf48Q96LS8 159 aa10.12□□□□□ -0.79
HERPUD1-219ENST00000570273 CAMK2N2Q96S95 79 aa10.12□□□□□ -0.79
HERPUD1-219ENST00000570273 PRO1933Q9H354 126 aa10.12□□□□□ -0.79
HERPUD1-219ENST00000570273 A0A087WTM6 91 aa10.11□□□□□ -0.79
HERPUD1-219ENST00000570273 RTL8CO15255 209 aa10.11□□□□□ -0.79
HERPUD1-219ENST00000570273 SLC25A34Q6PIV7 304 aa10.11□□□□□ -0.79
HERPUD1-219ENST00000570273 SFTA2Q6UW10 78 aa10.11□□□□□ -0.79
HERPUD1-219ENST00000570273 TP73-AS1Q9UF72 201 aa10.11□□□□□ -0.79
HERPUD1-219ENST00000570273 BOD1L2Q8IYS8 172 aa10.1□□□□□ -0.79
HERPUD1-219ENST00000570273 F8WDY8 70 aa10.09□□□□□ -0.79
HERPUD1-219ENST00000570273 HERV-K104P63124 156 aa10.09□□□□□ -0.79
HERPUD1-219ENST00000570273 UNQ6190/PRO20217Q6UXQ8 127 aa10.09□□□□□ -0.79
HERPUD1-219ENST00000570273 DNAH10Q8IVF4 4471 aa10.09□□□□□ -0.79
HERPUD1-219ENST00000570273 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.08□□□□□ -0.8
HERPUD1-219ENST00000570273 DLEU1O43261 78 aa10.08□□□□□ -0.8
HERPUD1-219ENST00000570273 SYCNQ0VAF6 134 aa10.08□□□□□ -0.8
HERPUD1-219ENST00000570273 C10orf25Q5T742 122 aa10.08□□□□□ -0.8
HERPUD1-219ENST00000570273 SCGB1D4Q6XE38 83 aa10.08□□□□□ -0.8
HERPUD1-219ENST00000570273 CARD19Q96LW7 228 aa10.08□□□□□ -0.8
HERPUD1-219ENST00000570273 EREGO14944 169 aa10.07□□□□□ -0.8
HERPUD1-219ENST00000570273 TNP2Q05952 138 aa10.07□□□□□ -0.8
HERPUD1-219ENST00000570273 MEIG1Q5JSS6 88 aa10.07□□□□□ -0.8
HERPUD1-219ENST00000570273 Q6ZRU5 148 aa10.07□□□□□ -0.8
HERPUD1-219ENST00000570273 Q8N814 137 aa10.07□□□□□ -0.8
HERPUD1-219ENST00000570273 UQCR10Q9UDW1 63 aa10.07□□□□□ -0.8
HERPUD1-219ENST00000570273 DNAH2Q9P225 4427 aa10.07□□□□□ -0.8
HERPUD1-219ENST00000570273 A0A0J9YXY3 114 aa10.07□□□□□ -0.8
HERPUD1-219ENST00000570273 TSTD3H0UI37 97 aa10.07□□□□□ -0.8
HERPUD1-219ENST00000570273 C6orf48Q9UBA6 75 aa10.07□□□□□ -0.8
HERPUD1-219ENST00000570273 TRBV30A0A0K0K1B3 111 aa10.06□□□□□ -0.8
HERPUD1-219ENST00000570273 SLPIP03973 132 aa10.06□□□□□ -0.8
HERPUD1-219ENST00000570273 ERG28Q9UKR5 140 aa10.05□□□□□ -0.8
HERPUD1-219ENST00000570273 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.04□□□□□ -0.8
HERPUD1-219ENST00000570273 CNBPP62633 177 aaKnown RBP10.04□□□□□ -0.8
HERPUD1-219ENST00000570273 C9orf116Q5BN46 136 aaPredicted RBP10.04□□□□□ -0.8
HERPUD1-219ENST00000570273 MIEN1Q9BRT3 115 aa10.04□□□□□ -0.8
HERPUD1-219ENST00000570273 FRAS1Q86XX4 4008 aa10.03□□□□□ -0.8
HERPUD1-219ENST00000570273 A0A0U1RRA0 63 aa10.03□□□□□ -0.8
HERPUD1-219ENST00000570273 SMIM13P0DJ93 91 aa10.03□□□□□ -0.8
HERPUD1-219ENST00000570273 LINC00587B1AMM8 73 aa10.02□□□□□ -0.81
HERPUD1-219ENST00000570273 PFN2P35080 140 aa10.02□□□□□ -0.81
HERPUD1-219ENST00000570273 HNRNPA3P51991 378 aaKnown RBP10.02□□□□□ -0.81
HERPUD1-219ENST00000570273 LINC00158P58513 81 aa10.02□□□□□ -0.81
HERPUD1-219ENST00000570273 CIRBPQ14011 172 aaKnown RBP10.02□□□□□ -0.81
HERPUD1-219ENST00000570273 RNF151Q2KHN1 245 aa10.02□□□□□ -0.81
HERPUD1-219ENST00000570273 C2orf91Q6ZV80 131 aa10.02□□□□□ -0.81
HERPUD1-219ENST00000570273 TMEM238C9JI98 176 aa10.01□□□□□ -0.81
HERPUD1-219ENST00000570273 TIMM17BO60830 172 aa10.01□□□□□ -0.81
HERPUD1-219ENST00000570273 LINC00336Q6ZUF6 198 aa10.01□□□□□ -0.81
HERPUD1-219ENST00000570273 DNAH17Q9UFH2 4485 aa10.01□□□□□ -0.81
HERPUD1-219ENST00000570273 LITAFQ99732 161 aa9.99□□□□□ -0.81
HERPUD1-219ENST00000570273 HIGD1BQ9P298 99 aa9.99□□□□□ -0.81
HERPUD1-219ENST00000570273 COX17Q14061 63 aa9.99□□□□□ -0.81
HERPUD1-219ENST00000570273 DAND5Q8N907 189 aa9.99□□□□□ -0.81
HERPUD1-219ENST00000570273 IGLV5-52A0A0A0MRZ9 124 aa9.98□□□□□ -0.81
HERPUD1-219ENST00000570273 RPL18AQ02543 176 aaKnown RBP9.98□□□□□ -0.81
HERPUD1-219ENST00000570273 ADAMTSL4-AS1Q5T5F5 129 aa9.98□□□□□ -0.81
HERPUD1-219ENST00000570273 MIR7-3HGQ8N6C7 128 aa9.98□□□□□ -0.81
HERPUD1-219ENST00000570273 LOC107984640A0A0U1RRK4 108 aa9.97□□□□□ -0.81
HERPUD1-219ENST00000570273 NDUFC2-KCTD14E9PQ53 114 aa9.97□□□□□ -0.81
HERPUD1-219ENST00000570273 FUSP35637 526 aaKnown RBP eCLIP9.97□□□□□ -0.81
HERPUD1-219ENST00000570273 SRSF9Q13242 221 aaKnown RBP eCLIP9.97□□□□□ -0.81
HERPUD1-219ENST00000570273 SPANXDQ9BXN6 97 aa9.97□□□□□ -0.81
HERPUD1-219ENST00000570273 SPANXB1Q9NS25 103 aaPredicted RBP9.97□□□□□ -0.81
HERPUD1-219ENST00000570273 SPANXCQ9NY87 97 aa9.97□□□□□ -0.81
HERPUD1-219ENST00000570273 FAT2Q9NYQ8 4349 aa9.97□□□□□ -0.81
HERPUD1-219ENST00000570273 C9orf163Q8N9P6 203 aa9.96□□□□□ -0.82
HERPUD1-219ENST00000570273 HIST1H4GQ99525 98 aa9.96□□□□□ -0.82
HERPUD1-219ENST00000570273 TLX1NBP0CAT3 122 aa9.95□□□□□ -0.82
HERPUD1-219ENST00000570273 DDTP30046 118 aa9.95□□□□□ -0.82
HERPUD1-219ENST00000570273 NPC2P61916 151 aa9.95□□□□□ -0.82
HERPUD1-219ENST00000570273 GAGE2EQ4V326 116 aa9.95□□□□□ -0.82
HERPUD1-219ENST00000570273 GAGE2DQ9UEU5 116 aa9.95□□□□□ -0.82
HERPUD1-219ENST00000570273 PKIGQ9Y2B9 76 aa9.95□□□□□ -0.82
HERPUD1-219ENST00000570273 KRTAP10-2P60368 255 aa9.94□□□□□ -0.82
HERPUD1-219ENST00000570273 LINC01620Q4KN68 170 aa9.94□□□□□ -0.82
HERPUD1-219ENST00000570273 Q6ZRP5 223 aa9.94□□□□□ -0.82
HERPUD1-219ENST00000570273 PCP4L1A6NKN8 68 aa9.93□□□□□ -0.82
HERPUD1-219ENST00000570273 GCSHP23434 173 aa9.93□□□□□ -0.82
HERPUD1-219ENST00000570273 HSD52Q0P140 79 aa9.93□□□□□ -0.82
HERPUD1-219ENST00000570273 GAGE2BQ13066 116 aa9.93□□□□□ -0.82
HERPUD1-219ENST00000570273 Q6ZVH6 145 aa9.93□□□□□ -0.82
HERPUD1-219ENST00000570273 SND1-IT1Q9HBX3 110 aa9.93□□□□□ -0.82
HERPUD1-219ENST00000570273 EPPK1P58107 5090 aaKnown RBP9.93□□□□□ -0.82
HERPUD1-219ENST00000570273 CTAG1AP78358 180 aa9.92□□□□□ -0.82
HERPUD1-219ENST00000570273 LINC00308Q8TCZ7 52 aa9.92□□□□□ -0.82
HERPUD1-219ENST00000570273 XAGE1AQ9HD64 81 aa9.92□□□□□ -0.82
HERPUD1-219ENST00000570273 IFITM1P13164 125 aa9.91□□□□□ -0.82
HERPUD1-219ENST00000570273 TAL2Q16559 108 aa9.91□□□□□ -0.82
HERPUD1-219ENST00000570273 COPS9Q8WXC6 57 aa9.91□□□□□ -0.82
HERPUD1-219ENST00000570273 PGPEP1Q9NXJ5 209 aa9.91□□□□□ -0.82
HERPUD1-219ENST00000570273 HECTD4Q9Y4D8 3996 aa9.91□□□□□ -0.82
HERPUD1-219ENST00000570273 SOSTDC1Q6X4U4 206 aa9.9□□□□□ -0.82
HERPUD1-219ENST00000570273 MUSTN1Q8IVN3 82 aa9.9□□□□□ -0.82
HERPUD1-219ENST00000570273 A0A096LNI7 61 aa9.9□□□□□ -0.83
HERPUD1-219ENST00000570273 IGKV2-24A0A0C4DH68 120 aa9.9□□□□□ -0.83
HERPUD1-219ENST00000570273 PTTG1IPP53801 180 aa9.9□□□□□ -0.83
HERPUD1-219ENST00000570273 C16orf90A8MZG2 172 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms