RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 HTN3P15516 51 aa4.74□□□□□ -1.65
CNOT1-222ENST00000570139 C9orf129Q5T035 196 aaKnown RBP4.74□□□□□ -1.65
CNOT1-222ENST00000570139 AMMECR1LQ6DCA0 310 aa4.74□□□□□ -1.65
CNOT1-222ENST00000570139 OR5A1Q8NGJ0 315 aa4.74□□□□□ -1.65
CNOT1-222ENST00000570139 AMELXQ99217 191 aa4.74□□□□□ -1.65
CNOT1-222ENST00000570139 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.73□□□□□ -1.65
CNOT1-222ENST00000570139 A0A096LPF7 62 aa4.73□□□□□ -1.65
CNOT1-222ENST00000570139 IGHV3OR16-9A0A0B4J2B5 98 aa4.73□□□□□ -1.65
CNOT1-222ENST00000570139 IGKV2-29A2NJV5 120 aaPredicted RBP4.73□□□□□ -1.65
CNOT1-222ENST00000570139 CCL25O15444 150 aa4.73□□□□□ -1.65
CNOT1-222ENST00000570139 LELP1Q5T871 98 aa4.73□□□□□ -1.65
CNOT1-222ENST00000570139 NTM-AS1Q6ZSK4 140 aa4.73□□□□□ -1.65
CNOT1-222ENST00000570139 FAM19A3Q7Z5A8 133 aa4.73□□□□□ -1.65
CNOT1-222ENST00000570139 CST9LQ9H4G1 147 aa4.73□□□□□ -1.65
CNOT1-222ENST00000570139 MRPL35Q9NZE8 188 aaKnown RBP4.73□□□□□ -1.65
CNOT1-222ENST00000570139 TRAV8-6A0A0B4J262 113 aa4.72□□□□□ -1.65
CNOT1-222ENST00000570139 A0A0J9YY99 117 aa4.72□□□□□ -1.65
CNOT1-222ENST00000570139 IGLC3P0DOY3 106 aa4.72□□□□□ -1.65
CNOT1-222ENST00000570139 SPATA45Q537H7 98 aa4.72□□□□□ -1.65
CNOT1-222ENST00000570139 ZNF664Q8N3J9 261 aa4.72□□□□□ -1.65
CNOT1-222ENST00000570139 PMCHL2Q9BQD1 86 aa4.72□□□□□ -1.65
CNOT1-222ENST00000570139 NOTCH1P46531 2555 aa4.71□□□□□ -1.65
CNOT1-222ENST00000570139 MGAM2Q2M2H8 2515 aa4.71□□□□□ -1.66
CNOT1-222ENST00000570139 TINCRA0A1B0GVN0 87 aa4.71□□□□□ -1.66
CNOT1-222ENST00000570139 C11orf86A6NJI1 115 aa4.71□□□□□ -1.66
CNOT1-222ENST00000570139 H3BRM9 83 aa4.71□□□□□ -1.66
CNOT1-222ENST00000570139 TCTAP57738 103 aa4.71□□□□□ -1.66
CNOT1-222ENST00000570139 HERVK_113P63121 156 aa4.71□□□□□ -1.66
CNOT1-222ENST00000570139 Q6ZUT4 128 aa4.71□□□□□ -1.66
CNOT1-222ENST00000570139 CDC42SE2Q9NRR3 84 aa4.71□□□□□ -1.66
CNOT1-222ENST00000570139 IGLV4-69A0A075B6H9 119 aa4.7□□□□□ -1.66
CNOT1-222ENST00000570139 DLEU1O43261 78 aa4.7□□□□□ -1.66
CNOT1-222ENST00000570139 C5orf47Q569G3 176 aa4.7□□□□□ -1.66
CNOT1-222ENST00000570139 ATOH7Q8N100 152 aa4.7□□□□□ -1.66
CNOT1-222ENST00000570139 CHAC1Q9BUX1 264 aa4.7□□□□□ -1.66
CNOT1-222ENST00000570139 UQCR10Q9UDW1 63 aa4.7□□□□□ -1.66
CNOT1-222ENST00000570139 MEGF8Q7Z7M0 2845 aa4.7□□□□□ -1.66
CNOT1-222ENST00000570139 NUPR2A6NF83 97 aa4.69□□□□□ -1.66
CNOT1-222ENST00000570139 TMEM262E9PQX1 116 aa4.69□□□□□ -1.66
CNOT1-222ENST00000570139 K7EP13 123 aa4.69□□□□□ -1.66
CNOT1-222ENST00000570139 UBE2D1P51668 147 aa4.69□□□□□ -1.66
CNOT1-222ENST00000570139 DEFA6Q01524 100 aa4.69□□□□□ -1.66
CNOT1-222ENST00000570139 SLC25A34Q6PIV7 304 aa4.69□□□□□ -1.66
CNOT1-222ENST00000570139 LYPD5Q6UWN5 251 aa4.69□□□□□ -1.66
CNOT1-222ENST00000570139 DEFB104AQ8WTQ1 72 aa4.69□□□□□ -1.66
CNOT1-222ENST00000570139 COX8AP10176 69 aa4.68□□□□□ -1.66
CNOT1-222ENST00000570139 DDTP30046 118 aa4.68□□□□□ -1.66
CNOT1-222ENST00000570139 CCL18P55774 89 aa4.68□□□□□ -1.66
CNOT1-222ENST00000570139 RBX1P62877 108 aa4.68□□□□□ -1.66
CNOT1-222ENST00000570139 TMEM170BQ5T4T1 132 aa4.68□□□□□ -1.66
CNOT1-222ENST00000570139 CEMP1Q6PRD7 247 aaPredicted RBP4.68□□□□□ -1.66
CNOT1-222ENST00000570139 FAM104AQ969W3 186 aa4.68□□□□□ -1.66
CNOT1-222ENST00000570139 MIEN1Q9BRT3 115 aa4.68□□□□□ -1.66
CNOT1-222ENST00000570139 KLK5Q9Y337 293 aaPredicted RBP4.68□□□□□ -1.66
CNOT1-222ENST00000570139 TRAV8-4A0A0B4J246 113 aa4.67□□□□□ -1.66
CNOT1-222ENST00000570139 A0A0J9YXV3 536 aa4.67□□□□□ -1.66
CNOT1-222ENST00000570139 TMEM223A0PJW6 202 aa4.67□□□□□ -1.66
CNOT1-222ENST00000570139 ZNF22P17026 224 aaPredicted RBP4.67□□□□□ -1.66
CNOT1-222ENST00000570139 NMUP48645 174 aa4.67□□□□□ -1.66
CNOT1-222ENST00000570139 SS18Q15532 418 aa4.67□□□□□ -1.66
CNOT1-222ENST00000570139 MPV17L2Q567V2 206 aa4.67□□□□□ -1.66
CNOT1-222ENST00000570139 SFTA2Q6UW10 78 aa4.67□□□□□ -1.66
CNOT1-222ENST00000570139 BOD1L2Q8IYS8 172 aa4.67□□□□□ -1.66
CNOT1-222ENST00000570139 PLEKHB2Q96CS7 222 aa4.67□□□□□ -1.66
CNOT1-222ENST00000570139 MRPS16Q9Y3D3 137 aaKnown RBP4.67□□□□□ -1.66
CNOT1-222ENST00000570139 COL7A1Q02388 2944 aa4.67□□□□□ -1.66
CNOT1-222ENST00000570139 TENM3Q9P273 2699 aa4.66□□□□□ -1.66
CNOT1-222ENST00000570139 IGLV4-60A0A075B6I1 120 aa4.66□□□□□ -1.66
CNOT1-222ENST00000570139 LEPROTO15243 131 aa4.66□□□□□ -1.66
CNOT1-222ENST00000570139 CRPP02741 224 aa4.66□□□□□ -1.66
CNOT1-222ENST00000570139 ANGP03950 147 aaKnown RBP4.66□□□□□ -1.66
CNOT1-222ENST00000570139 LINC01556Q5JQF7 62 aa4.66□□□□□ -1.66
CNOT1-222ENST00000570139 UPK3BQ9BT76 320 aa4.66□□□□□ -1.66
CNOT1-222ENST00000570139 PRO1933Q9H354 126 aa4.66□□□□□ -1.66
CNOT1-222ENST00000570139 PRR34Q9NV39 138 aa4.66□□□□□ -1.66
CNOT1-222ENST00000570139 TRAV13-1A0A0B4J241 112 aa4.65□□□□□ -1.67
CNOT1-222ENST00000570139 IGHV1-58A0A0C4DH39 117 aa4.65□□□□□ -1.67
CNOT1-222ENST00000570139 LINC00959A0A1B0GUT2 108 aa4.65□□□□□ -1.67
CNOT1-222ENST00000570139 FAM240AA0A1B0GVK7 77 aa4.65□□□□□ -1.67
CNOT1-222ENST00000570139 IGLL5B9A064 214 aa4.65□□□□□ -1.67
CNOT1-222ENST00000570139 J3QQQ9 107 aa4.65□□□□□ -1.67
CNOT1-222ENST00000570139 DNAH10OSP0CZ25 163 aa4.65□□□□□ -1.67
CNOT1-222ENST00000570139 LGALS3P17931 250 aaKnown RBP4.65□□□□□ -1.67
CNOT1-222ENST00000570139 CXCL5P42830 114 aa4.65□□□□□ -1.67
CNOT1-222ENST00000570139 MIAQ16674 131 aa4.65□□□□□ -1.67
CNOT1-222ENST00000570139 ESRGQ1W209 222 aa4.65□□□□□ -1.67
CNOT1-222ENST00000570139 RNASE13Q5GAN3 156 aaKnown RBP4.65□□□□□ -1.67
CNOT1-222ENST00000570139 C10orf126Q8N4M7 172 aa4.65□□□□□ -1.67
CNOT1-222ENST00000570139 KRTAP1-5Q9BYS1 174 aa4.65□□□□□ -1.67
CNOT1-222ENST00000570139 HIGD1BQ9P298 99 aa4.65□□□□□ -1.67
CNOT1-222ENST00000570139 HUWE1Q7Z6Z7 4374 aaKnown RBP4.65□□□□□ -1.67
CNOT1-222ENST00000570139 MYMXA0A1B0GTQ4 84 aa4.64□□□□□ -1.67
CNOT1-222ENST00000570139 H0Y9J4 135 aa4.64□□□□□ -1.67
CNOT1-222ENST00000570139 UBE2AP49459 152 aa4.64□□□□□ -1.67
CNOT1-222ENST00000570139 Q6ZR54 194 aa4.64□□□□□ -1.67
CNOT1-222ENST00000570139 LINC00269Q8N2A0 174 aa4.64□□□□□ -1.67
CNOT1-222ENST00000570139 C14orf144Q96I85 54 aa4.64□□□□□ -1.67
CNOT1-222ENST00000570139 CDKN2A-AS1Q9UH64 79 aa4.64□□□□□ -1.67
CNOT1-222ENST00000570139 DNAH9Q9NYC9 4486 aa4.63□□□□□ -1.67
CNOT1-222ENST00000570139 M0R143 59 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 162.8 ms