RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 SCGB3A1Q96QR1 104 aa8.51□□□□□ -1.05
GTF3C1-211ENST00000569653 NDUFA1O15239 70 aa8.5□□□□□ -1.05
GTF3C1-211ENST00000569653 S100A1P23297 94 aa8.5□□□□□ -1.05
GTF3C1-211ENST00000569653 C9orf116Q5BN46 136 aaPredicted RBP8.5□□□□□ -1.05
GTF3C1-211ENST00000569653 Q6ZRP5 223 aa8.5□□□□□ -1.05
GTF3C1-211ENST00000569653 FAM19A3Q7Z5A8 133 aa8.5□□□□□ -1.05
GTF3C1-211ENST00000569653 LINC01561Q8N1V8 128 aa8.5□□□□□ -1.05
GTF3C1-211ENST00000569653 HERVK_113P63121 156 aa8.49□□□□□ -1.05
GTF3C1-211ENST00000569653 PMCHL1Q16048 86 aa8.49□□□□□ -1.05
GTF3C1-211ENST00000569653 RNF151Q2KHN1 245 aa8.49□□□□□ -1.05
GTF3C1-211ENST00000569653 PHF5AQ7RTV0 110 aaKnown RBP8.49□□□□□ -1.05
GTF3C1-211ENST00000569653 MRPL35Q9NZE8 188 aaKnown RBP8.49□□□□□ -1.05
GTF3C1-211ENST00000569653 PSORS1C2Q9UIG4 136 aa8.49□□□□□ -1.05
GTF3C1-211ENST00000569653 FAM168BA1KXE4 195 aa8.48□□□□□ -1.05
GTF3C1-211ENST00000569653 LINC00310P59036 64 aa8.48□□□□□ -1.05
GTF3C1-211ENST00000569653 RPL18AQ02543 176 aaKnown RBP8.48□□□□□ -1.05
GTF3C1-211ENST00000569653 KRTAP7-1Q8IUC3 87 aa8.48□□□□□ -1.05
GTF3C1-211ENST00000569653 GEMIN7Q9H840 131 aaKnown RBP8.48□□□□□ -1.05
GTF3C1-211ENST00000569653 RAB5BP61020 215 aa8.46□□□□□ -1.06
GTF3C1-211ENST00000569653 UNQ6190/PRO20217Q6UXQ8 127 aa8.46□□□□□ -1.06
GTF3C1-211ENST00000569653 PACRGQ96M98 296 aaPredicted RBP8.46□□□□□ -1.06
GTF3C1-211ENST00000569653 C6orf48Q9UBA6 75 aa8.46□□□□□ -1.06
GTF3C1-211ENST00000569653 LPAP08519 4548 aa8.46□□□□□ -1.06
GTF3C1-211ENST00000569653 NUPR1O60356 82 aa8.45□□□□□ -1.06
GTF3C1-211ENST00000569653 PRSS2P07478 247 aa8.45□□□□□ -1.06
GTF3C1-211ENST00000569653 KIAA0087Q14695 138 aa8.45□□□□□ -1.06
GTF3C1-211ENST00000569653 PDZD11Q5EBL8 140 aa8.45□□□□□ -1.06
GTF3C1-211ENST00000569653 REG3GQ6UW15 175 aa8.45□□□□□ -1.06
GTF3C1-211ENST00000569653 CHCHD1Q96BP2 118 aaKnown RBP8.45□□□□□ -1.06
GTF3C1-211ENST00000569653 TRBV30A0A0K0K1B3 111 aa8.44□□□□□ -1.06
GTF3C1-211ENST00000569653 TINCRA0A1B0GVN0 87 aa8.44□□□□□ -1.06
GTF3C1-211ENST00000569653 HBDP02042 147 aa8.44□□□□□ -1.06
GTF3C1-211ENST00000569653 PMVKQ15126 192 aa8.44□□□□□ -1.06
GTF3C1-211ENST00000569653 LINC00469Q8N7U9 141 aa8.44□□□□□ -1.06
GTF3C1-211ENST00000569653 CST9LQ9H4G1 147 aa8.44□□□□□ -1.06
GTF3C1-211ENST00000569653 CDKN2A-AS1Q9UH64 79 aa8.44□□□□□ -1.06
GTF3C1-211ENST00000569653 SERF1AO75920 110 aa8.43□□□□□ -1.06
GTF3C1-211ENST00000569653 TLX1NBP0CAT3 122 aa8.43□□□□□ -1.06
GTF3C1-211ENST00000569653 BAGE3Q86Y29 109 aa8.43□□□□□ -1.06
GTF3C1-211ENST00000569653 Q8IZM0 81 aa8.43□□□□□ -1.06
GTF3C1-211ENST00000569653 TOMM7Q9P0U1 55 aa8.43□□□□□ -1.06
GTF3C1-211ENST00000569653 HIST1H2BKO60814 126 aa8.42□□□□□ -1.06
GTF3C1-211ENST00000569653 HIST1H2BJP06899 126 aa8.42□□□□□ -1.06
GTF3C1-211ENST00000569653 HIST1H2BOP23527 126 aa8.42□□□□□ -1.06
GTF3C1-211ENST00000569653 HIST1H2BBP33778 126 aa8.42□□□□□ -1.06
GTF3C1-211ENST00000569653 HIST1H2BDP58876 126 aa8.42□□□□□ -1.06
GTF3C1-211ENST00000569653 CKS1BP61024 79 aa8.42□□□□□ -1.06
GTF3C1-211ENST00000569653 HIST1H2BCP62807 126 aa8.42□□□□□ -1.06
GTF3C1-211ENST00000569653 HIST2H2BEQ16778 126 aa8.42□□□□□ -1.06
GTF3C1-211ENST00000569653 C1orf137Q5JT78 98 aa8.42□□□□□ -1.06
GTF3C1-211ENST00000569653 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.42□□□□□ -1.06
GTF3C1-211ENST00000569653 FAM19A2Q8N3H0 131 aa8.42□□□□□ -1.06
GTF3C1-211ENST00000569653 HIST1H2BHQ93079 126 aa8.42□□□□□ -1.06
GTF3C1-211ENST00000569653 HIST1H2BNQ99877 126 aa8.42□□□□□ -1.06
GTF3C1-211ENST00000569653 HIST1H2BMQ99879 126 aa8.42□□□□□ -1.06
GTF3C1-211ENST00000569653 IGLV5-45A0A087WSX0 123 aa8.41□□□□□ -1.06
GTF3C1-211ENST00000569653 C6orf226Q5I0X4 101 aa8.41□□□□□ -1.06
GTF3C1-211ENST00000569653 C2orf82Q6UX34 121 aa8.41□□□□□ -1.06
GTF3C1-211ENST00000569653 ATP5LO75964 103 aa8.4□□□□□ -1.06
GTF3C1-211ENST00000569653 CXCL5P42830 114 aa8.4□□□□□ -1.06
GTF3C1-211ENST00000569653 FAM19A5Q7Z5A7 132 aaPredicted RBP8.4□□□□□ -1.06
GTF3C1-211ENST00000569653 SMIM1B2RUZ4 78 aa8.39□□□□□ -1.07
GTF3C1-211ENST00000569653 NDUFC2-KCTD14E9PQ53 114 aa8.39□□□□□ -1.07
GTF3C1-211ENST00000569653 H3BRM9 83 aa8.39□□□□□ -1.07
GTF3C1-211ENST00000569653 HSBP1O75506 76 aa8.39□□□□□ -1.07
GTF3C1-211ENST00000569653 IGLV7-43P04211 117 aa8.39□□□□□ -1.07
GTF3C1-211ENST00000569653 NDUFA6P56556 154 aa8.39□□□□□ -1.07
GTF3C1-211ENST00000569653 GAGE2EQ4V326 116 aa8.39□□□□□ -1.07
GTF3C1-211ENST00000569653 GAGE2DQ9UEU5 116 aa8.39□□□□□ -1.07
GTF3C1-211ENST00000569653 F8VRH5 84 aa8.38□□□□□ -1.07
GTF3C1-211ENST00000569653 IGLC3P0DOY3 106 aa8.38□□□□□ -1.07
GTF3C1-211ENST00000569653 C9orf129Q5T035 196 aaKnown RBP8.38□□□□□ -1.07
GTF3C1-211ENST00000569653 PRR26Q8N8Z3 221 aa8.37□□□□□ -1.07
GTF3C1-211ENST00000569653 KRTAP1-4P0C5Y4 121 aa8.36□□□□□ -1.07
GTF3C1-211ENST00000569653 SPINK8P0C7L1 97 aa8.36□□□□□ -1.07
GTF3C1-211ENST00000569653 COX7B2Q8TF08 81 aa8.36□□□□□ -1.07
GTF3C1-211ENST00000569653 IFI27L1Q96BM0 104 aa8.35□□□□□ -1.07
GTF3C1-211ENST00000569653 H0Y9J4 135 aa8.34□□□□□ -1.07
GTF3C1-211ENST00000569653 M0QXV9 152 aa8.34□□□□□ -1.07
GTF3C1-211ENST00000569653 COA6Q5JTJ3 125 aaKnown RBP8.34□□□□□ -1.07
GTF3C1-211ENST00000569653 ZNF22P17026 224 aaPredicted RBP8.33□□□□□ -1.08
GTF3C1-211ENST00000569653 DIRC1Q969H9 104 aa8.33□□□□□ -1.08
GTF3C1-211ENST00000569653 LEPROTL1O95214 131 aa8.32□□□□□ -1.08
GTF3C1-211ENST00000569653 FABP4P15090 132 aa8.32□□□□□ -1.08
GTF3C1-211ENST00000569653 TRAV12-1A0A0B4J245 112 aa8.31□□□□□ -1.08
GTF3C1-211ENST00000569653 IGLV5-39A0A0G2JS06 123 aa8.31□□□□□ -1.08
GTF3C1-211ENST00000569653 C11orf86A6NJI1 115 aa8.31□□□□□ -1.08
GTF3C1-211ENST00000569653 TMEM170BQ5T4T1 132 aa8.31□□□□□ -1.08
GTF3C1-211ENST00000569653 CHTOPQ9Y3Y2 248 aaKnown RBP8.31□□□□□ -1.08
GTF3C1-211ENST00000569653 XAGE1AQ9HD64 81 aa8.29□□□□□ -1.08
GTF3C1-211ENST00000569653 UBE2BP63146 152 aa8.28□□□□□ -1.08
GTF3C1-211ENST00000569653 SFTA2Q6UW10 78 aa8.28□□□□□ -1.08
GTF3C1-211ENST00000569653 HSPB8Q9UJY1 196 aa8.28□□□□□ -1.08
GTF3C1-211ENST00000569653 H0Y8G0 127 aa8.27□□□□□ -1.09
GTF3C1-211ENST00000569653 C22orf24Q9Y442 160 aa8.26□□□□□ -1.09
GTF3C1-211ENST00000569653 IGLV1-50A0A075B6I6 118 aa8.25□□□□□ -1.09
GTF3C1-211ENST00000569653 PMCHL2Q9BQD1 86 aa8.25□□□□□ -1.09
GTF3C1-211ENST00000569653 TMEM223A0PJW6 202 aa8.24□□□□□ -1.09
GTF3C1-211ENST00000569653 COX17Q14061 63 aa8.24□□□□□ -1.09
GTF3C1-211ENST00000569653 LBHQ53QV2 105 aaPredicted RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 133.5 ms