RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 C6orf48Q9UBA6 75 aa8.15□□□□□ -1.1
CDT1-203ENST00000569140 CHTOPQ9Y3Y2 248 aaKnown RBP8.15□□□□□ -1.1
CDT1-203ENST00000569140 SMIM1B2RUZ4 78 aa8.14□□□□□ -1.11
CDT1-203ENST00000569140 ATP6V1G1O75348 118 aa8.14□□□□□ -1.11
CDT1-203ENST00000569140 RNF151Q2KHN1 245 aa8.14□□□□□ -1.11
CDT1-203ENST00000569140 TMEM170BQ5T4T1 132 aa8.14□□□□□ -1.11
CDT1-203ENST00000569140 PCLOQ9Y6V0 5065 aa8.14□□□□□ -1.11
CDT1-203ENST00000569140 IGLV5-45A0A087WSX0 123 aa8.13□□□□□ -1.11
CDT1-203ENST00000569140 TRBV30A0A0K0K1B3 111 aa8.13□□□□□ -1.11
CDT1-203ENST00000569140 LEPROTL1O95214 131 aa8.13□□□□□ -1.11
CDT1-203ENST00000569140 FABP4P15090 132 aa8.13□□□□□ -1.11
CDT1-203ENST00000569140 S100A1P23297 94 aa8.13□□□□□ -1.11
CDT1-203ENST00000569140 LINC00310P59036 64 aa8.13□□□□□ -1.11
CDT1-203ENST00000569140 GAGE2EQ4V326 116 aa8.13□□□□□ -1.11
CDT1-203ENST00000569140 COX7B2Q8TF08 81 aa8.13□□□□□ -1.11
CDT1-203ENST00000569140 GAGE2DQ9UEU5 116 aa8.13□□□□□ -1.11
CDT1-203ENST00000569140 NUPR1O60356 82 aa8.12□□□□□ -1.11
CDT1-203ENST00000569140 ZNF22P17026 224 aaPredicted RBP8.12□□□□□ -1.11
CDT1-203ENST00000569140 RPL37AP61513 92 aaKnown RBP8.12□□□□□ -1.11
CDT1-203ENST00000569140 C9orf116Q5BN46 136 aaPredicted RBP8.12□□□□□ -1.11
CDT1-203ENST00000569140 PLAC8Q9NZF1 115 aa8.12□□□□□ -1.11
CDT1-203ENST00000569140 ABCA13Q86UQ4 5058 aa8.12□□□□□ -1.11
CDT1-203ENST00000569140 C11orf86A6NJI1 115 aa8.11□□□□□ -1.11
CDT1-203ENST00000569140 HIST1H2BKO60814 126 aa8.11□□□□□ -1.11
CDT1-203ENST00000569140 HIST1H2BJP06899 126 aa8.11□□□□□ -1.11
CDT1-203ENST00000569140 INAFM2P0DMQ5 153 aa8.11□□□□□ -1.11
CDT1-203ENST00000569140 HIST1H2BOP23527 126 aa8.11□□□□□ -1.11
CDT1-203ENST00000569140 HIST1H2BBP33778 126 aa8.11□□□□□ -1.11
CDT1-203ENST00000569140 CXCL5P42830 114 aa8.11□□□□□ -1.11
CDT1-203ENST00000569140 HIST1H2BDP58876 126 aa8.11□□□□□ -1.11
CDT1-203ENST00000569140 HIST1H2BCP62807 126 aa8.11□□□□□ -1.11
CDT1-203ENST00000569140 HIST2H2BEQ16778 126 aa8.11□□□□□ -1.11
CDT1-203ENST00000569140 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.11□□□□□ -1.11
CDT1-203ENST00000569140 C7orf33Q8WU49 177 aa8.11□□□□□ -1.11
CDT1-203ENST00000569140 HIST1H2BHQ93079 126 aa8.11□□□□□ -1.11
CDT1-203ENST00000569140 HIST1H2BNQ99877 126 aa8.11□□□□□ -1.11
CDT1-203ENST00000569140 HIST1H2BMQ99879 126 aa8.11□□□□□ -1.11
CDT1-203ENST00000569140 HSPB8Q9UJY1 196 aa8.11□□□□□ -1.11
CDT1-203ENST00000569140 TRAV12-1A0A0B4J245 112 aa8.1□□□□□ -1.11
CDT1-203ENST00000569140 F8VRH5 84 aa8.1□□□□□ -1.11
CDT1-203ENST00000569140 Q6ZRP5 223 aa8.1□□□□□ -1.11
CDT1-203ENST00000569140 NDUFC2-KCTD14E9PQ53 114 aa8.08□□□□□ -1.12
CDT1-203ENST00000569140 TLX1NBP0CAT3 122 aa8.08□□□□□ -1.12
CDT1-203ENST00000569140 FAM19A5Q7Z5A7 132 aaPredicted RBP8.08□□□□□ -1.12
CDT1-203ENST00000569140 A0A1W2PNN7 141 aa8.06□□□□□ -1.12
CDT1-203ENST00000569140 FAM168BA1KXE4 195 aa8.06□□□□□ -1.12
CDT1-203ENST00000569140 PMCHL2Q9BQD1 86 aa8.06□□□□□ -1.12
CDT1-203ENST00000569140 MAP1LC3CQ9BXW4 147 aa8.06□□□□□ -1.12
CDT1-203ENST00000569140 IGLV5-39A0A0G2JS06 123 aa8.05□□□□□ -1.12
CDT1-203ENST00000569140 ODF1Q14990 250 aa8.05□□□□□ -1.12
CDT1-203ENST00000569140 TMEM223A0PJW6 202 aa8.04□□□□□ -1.12
CDT1-203ENST00000569140 PFN2P35080 140 aa8.04□□□□□ -1.12
CDT1-203ENST00000569140 ZNF625Q96I27 306 aaPredicted RBP8.04□□□□□ -1.12
CDT1-203ENST00000569140 XAGE1AQ9HD64 81 aa8.04□□□□□ -1.12
CDT1-203ENST00000569140 VPS13BQ7Z7G8 4022 aa8.03□□□□□ -1.12
CDT1-203ENST00000569140 PLNP26678 52 aa8.03□□□□□ -1.12
CDT1-203ENST00000569140 PHF5AQ7RTV0 110 aaKnown RBP8.03□□□□□ -1.12
CDT1-203ENST00000569140 FAT1Q14517 4588 aa8.03□□□□□ -1.12
CDT1-203ENST00000569140 DPM2O94777 84 aa8.02□□□□□ -1.13
CDT1-203ENST00000569140 C9orf129Q5T035 196 aaKnown RBP8.02□□□□□ -1.13
CDT1-203ENST00000569140 M0QXV9 152 aa8.01□□□□□ -1.13
CDT1-203ENST00000569140 IGKCP01834 107 aa8.01□□□□□ -1.13
CDT1-203ENST00000569140 HERVK_113P61574 105 aa8.01□□□□□ -1.13
CDT1-203ENST00000569140 PRR3P79522 188 aaKnown RBP8.01□□□□□ -1.13
CDT1-203ENST00000569140 ERG28Q9UKR5 140 aa8.01□□□□□ -1.13
CDT1-203ENST00000569140 KRTAP10-4P60372 401 aaPredicted RBP8□□□□□ -1.13
CDT1-203ENST00000569140 UBE2BP63146 152 aa8□□□□□ -1.13
CDT1-203ENST00000569140 SFTA2Q6UW10 78 aa8□□□□□ -1.13
CDT1-203ENST00000569140 KRTDAPP60985 99 aa7.99□□□□□ -1.13
CDT1-203ENST00000569140 A0A0U1RRA0 63 aa7.98□□□□□ -1.13
CDT1-203ENST00000569140 SYS1-DBNDD2H3BUS1 97 aa7.98□□□□□ -1.13
CDT1-203ENST00000569140 HNRNPA3P51991 378 aaKnown RBP7.98□□□□□ -1.13
CDT1-203ENST00000569140 LINC00158P58513 81 aa7.98□□□□□ -1.13
CDT1-203ENST00000569140 MEIG1Q5JSS6 88 aa7.98□□□□□ -1.13
CDT1-203ENST00000569140 SERTAD4-AS1Q5TG53 156 aa7.98□□□□□ -1.13
CDT1-203ENST00000569140 COA6Q5JTJ3 125 aaKnown RBP7.97□□□□□ -1.13
CDT1-203ENST00000569140 PLEKHB2Q96CS7 222 aa7.97□□□□□ -1.13
CDT1-203ENST00000569140 MYMXA0A1B0GTQ4 84 aa7.96□□□□□ -1.14
CDT1-203ENST00000569140 LEPROTO15243 131 aa7.96□□□□□ -1.14
CDT1-203ENST00000569140 LGALS3P17931 250 aaKnown RBP7.96□□□□□ -1.14
CDT1-203ENST00000569140 C1orf137Q5JT78 98 aa7.96□□□□□ -1.14
CDT1-203ENST00000569140 PET117Q6UWS5 81 aa7.96□□□□□ -1.14
CDT1-203ENST00000569140 KRTAP7-1Q8IUC3 87 aa7.96□□□□□ -1.14
CDT1-203ENST00000569140 NDUFA12Q9UI09 145 aa7.96□□□□□ -1.14
CDT1-203ENST00000569140 S100A6P06703 90 aa7.95□□□□□ -1.14
CDT1-203ENST00000569140 C3orf79P0CE67 100 aa7.95□□□□□ -1.14
CDT1-203ENST00000569140 S100A2P29034 98 aa7.95□□□□□ -1.14
CDT1-203ENST00000569140 TSPEAR-AS2P59090 65 aa7.95□□□□□ -1.14
CDT1-203ENST00000569140 COX17Q14061 63 aa7.95□□□□□ -1.14
CDT1-203ENST00000569140 NKAPP1Q8N9T2 125 aa7.95□□□□□ -1.14
CDT1-203ENST00000569140 PSORS1C2Q9UIG4 136 aa7.95□□□□□ -1.14
CDT1-203ENST00000569140 C22orf24Q9Y442 160 aa7.95□□□□□ -1.14
CDT1-203ENST00000569140 C20orf202A1L168 122 aa7.94□□□□□ -1.14
CDT1-203ENST00000569140 J3QL48 77 aa7.94□□□□□ -1.14
CDT1-203ENST00000569140 J3QQQ9 107 aa7.94□□□□□ -1.14
CDT1-203ENST00000569140 HERV-K104P63124 156 aa7.94□□□□□ -1.14
CDT1-203ENST00000569140 LBHQ53QV2 105 aaPredicted RBP7.94□□□□□ -1.14
CDT1-203ENST00000569140 SND1-IT1Q9HBX3 110 aa7.94□□□□□ -1.14
CDT1-203ENST00000569140 SRRM2Q9UQ35 2752 aaKnown RBP7.93□□□□□ -1.14
CDT1-203ENST00000569140 GAGE10A6NGK3 116 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms