RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 Q6ZN92 141 aa7.37□□□□□ -1.23
SNX29-207ENST00000568949 KRTAP7-1Q8IUC3 87 aa7.37□□□□□ -1.23
SNX29-207ENST00000568949 ORAOV1Q8WV07 137 aa7.37□□□□□ -1.23
SNX29-207ENST00000568949 ZNF861PO60384 105 aa7.36□□□□□ -1.23
SNX29-207ENST00000568949 FABP9Q0Z7S8 132 aa7.36□□□□□ -1.23
SNX29-207ENST00000568949 C10orf25Q5T742 122 aa7.36□□□□□ -1.23
SNX29-207ENST00000568949 C6orf48Q9UBA6 75 aa7.36□□□□□ -1.23
SNX29-207ENST00000568949 GAGE2EQ4V326 116 aa7.35□□□□□ -1.23
SNX29-207ENST00000568949 UNQ6190/PRO20217Q6UXQ8 127 aa7.35□□□□□ -1.23
SNX29-207ENST00000568949 Q6ZUT4 128 aa7.35□□□□□ -1.23
SNX29-207ENST00000568949 C2orf88Q9BSF0 95 aa7.35□□□□□ -1.23
SNX29-207ENST00000568949 MRPL18Q9H0U6 180 aaKnown RBP7.35□□□□□ -1.23
SNX29-207ENST00000568949 GAGE2DQ9UEU5 116 aa7.35□□□□□ -1.23
SNX29-207ENST00000568949 IGHV3OR16-9A0A0B4J2B5 98 aa7.34□□□□□ -1.23
SNX29-207ENST00000568949 TMEM141Q96I45 108 aa7.34□□□□□ -1.23
SNX29-207ENST00000568949 SMCO4Q9NRQ5 59 aa7.34□□□□□ -1.23
SNX29-207ENST00000568949 TRAPPC1Q9Y5R8 145 aa7.34□□□□□ -1.23
SNX29-207ENST00000568949 RAB5BP61020 215 aa7.33□□□□□ -1.24
SNX29-207ENST00000568949 RPL39P62891 51 aaKnown RBP7.33□□□□□ -1.24
SNX29-207ENST00000568949 SEC11AP67812 179 aa7.33□□□□□ -1.24
SNX29-207ENST00000568949 C2orf66Q6UXQ4 117 aa7.33□□□□□ -1.24
SNX29-207ENST00000568949 TEX43Q6ZNM6 134 aa7.33□□□□□ -1.24
SNX29-207ENST00000568949 ALKBH7Q9BT30 221 aaPredicted RBP7.33□□□□□ -1.24
SNX29-207ENST00000568949 IFITM10A6NMD0 228 aa7.32□□□□□ -1.24
SNX29-207ENST00000568949 KIAA1644Q3SXP7 199 aa7.32□□□□□ -1.24
SNX29-207ENST00000568949 FA2HQ7L5A8 372 aa7.32□□□□□ -1.24
SNX29-207ENST00000568949 VCX2Q9H322 139 aa7.32□□□□□ -1.24
SNX29-207ENST00000568949 TGIF2-C20orf24A0A0A6YYL0 155 aa7.31□□□□□ -1.24
SNX29-207ENST00000568949 NUPR1O60356 82 aa7.31□□□□□ -1.24
SNX29-207ENST00000568949 TYMSOSQ8TAI1 123 aa7.31□□□□□ -1.24
SNX29-207ENST00000568949 TIMM17AQ99595 171 aa7.31□□□□□ -1.24
SNX29-207ENST00000568949 A0A087X002 238 aa7.3□□□□□ -1.24
SNX29-207ENST00000568949 TRBV30A0A0K0K1B3 111 aa7.3□□□□□ -1.24
SNX29-207ENST00000568949 NDUFC2-KCTD14E9PQ53 114 aa7.3□□□□□ -1.24
SNX29-207ENST00000568949 CRYGAP11844 174 aa7.3□□□□□ -1.24
SNX29-207ENST00000568949 KIAA0087Q14695 138 aa7.3□□□□□ -1.24
SNX29-207ENST00000568949 TPRXLQ17RH7 258 aa7.3□□□□□ -1.24
SNX29-207ENST00000568949 C9orf129Q5T035 196 aaKnown RBP7.3□□□□□ -1.24
SNX29-207ENST00000568949 ERASQ7Z444 233 aa7.3□□□□□ -1.24
SNX29-207ENST00000568949 TOMM6Q96B49 74 aa7.3□□□□□ -1.24
SNX29-207ENST00000568949 CDIP1Q9H305 208 aa7.3□□□□□ -1.24
SNX29-207ENST00000568949 IGLV4-3A0A075B6K6 122 aa7.29□□□□□ -1.24
SNX29-207ENST00000568949 LINC01546A6NGU7 62 aa7.29□□□□□ -1.24
SNX29-207ENST00000568949 FAM104AQ969W3 186 aa7.29□□□□□ -1.24
SNX29-207ENST00000568949 MUC17Q685J3 4493 aa7.29□□□□□ -1.24
SNX29-207ENST00000568949 LCE2BO14633 110 aa7.28□□□□□ -1.24
SNX29-207ENST00000568949 LINC00614P0C842 121 aa7.28□□□□□ -1.24
SNX29-207ENST00000568949 LINC01561Q8N1V8 128 aa7.28□□□□□ -1.24
SNX29-207ENST00000568949 SCGB3A1Q96QR1 104 aa7.28□□□□□ -1.24
SNX29-207ENST00000568949 IGIPA6NJ69 53 aa7.27□□□□□ -1.25
SNX29-207ENST00000568949 RPL28P46779 137 aaKnown RBP7.27□□□□□ -1.25
SNX29-207ENST00000568949 HERVK_113P63121 156 aa7.27□□□□□ -1.25
SNX29-207ENST00000568949 LBHQ53QV2 105 aaPredicted RBP7.26□□□□□ -1.25
SNX29-207ENST00000568949 SLC7A5P1Q8MH63 180 aa7.26□□□□□ -1.25
SNX29-207ENST00000568949 PACRGQ96M98 296 aaPredicted RBP7.26□□□□□ -1.25
SNX29-207ENST00000568949 AMELXQ99217 191 aa7.26□□□□□ -1.25
SNX29-207ENST00000568949 RETNLBQ9BQ08 111 aa7.26□□□□□ -1.25
SNX29-207ENST00000568949 CRCT1Q9UGL9 99 aa7.26□□□□□ -1.25
SNX29-207ENST00000568949 C22orf24Q9Y442 160 aa7.26□□□□□ -1.25
SNX29-207ENST00000568949 C2orf82Q6UX34 121 aa7.25□□□□□ -1.25
SNX29-207ENST00000568949 FAM19A3Q7Z5A8 133 aa7.25□□□□□ -1.25
SNX29-207ENST00000568949 C18orf32Q8TCD1 76 aa7.25□□□□□ -1.25
SNX29-207ENST00000568949 GEMIN7Q9H840 131 aaKnown RBP7.25□□□□□ -1.25
SNX29-207ENST00000568949 FSIP2Q5CZC0 6907 aa7.24□□□□□ -1.25
SNX29-207ENST00000568949 IGLV7-46A0A075B6I9 117 aa7.24□□□□□ -1.25
SNX29-207ENST00000568949 HBDP02042 147 aa7.24□□□□□ -1.25
SNX29-207ENST00000568949 CTAG1AP78358 180 aa7.24□□□□□ -1.25
SNX29-207ENST00000568949 LINC00242Q5T6M2 205 aa7.24□□□□□ -1.25
SNX29-207ENST00000568949 CHCHD1Q96BP2 118 aaKnown RBP7.24□□□□□ -1.25
SNX29-207ENST00000568949 YPEL4Q96NS1 127 aa7.24□□□□□ -1.25
SNX29-207ENST00000568949 BCE1O60756 84 aa7.23□□□□□ -1.25
SNX29-207ENST00000568949 ATP5LO75964 103 aa7.23□□□□□ -1.25
SNX29-207ENST00000568949 PRSS2P07478 247 aa7.23□□□□□ -1.25
SNX29-207ENST00000568949 KRTAP13-2Q52LG2 175 aa7.23□□□□□ -1.25
SNX29-207ENST00000568949 LINC00173Q6ZV60 143 aa7.23□□□□□ -1.25
SNX29-207ENST00000568949 CBLN2Q8IUK8 224 aa7.23□□□□□ -1.25
SNX29-207ENST00000568949 LINC00304Q8N9R0 145 aa7.23□□□□□ -1.25
SNX29-207ENST00000568949 TP73-AS1Q9UF72 201 aa7.23□□□□□ -1.25
SNX29-207ENST00000568949 SMCPP49901 116 aaPredicted RBP7.22□□□□□ -1.25
SNX29-207ENST00000568949 PMVKQ15126 192 aa7.22□□□□□ -1.25
SNX29-207ENST00000568949 TINCRA0A1B0GVN0 87 aa7.21□□□□□ -1.26
SNX29-207ENST00000568949 FAM229BQ4G0N7 80 aa7.21□□□□□ -1.26
SNX29-207ENST00000568949 MRPL55Q7Z7F7 128 aaKnown RBP7.21□□□□□ -1.26
SNX29-207ENST00000568949 BAGE3Q86Y29 109 aa7.21□□□□□ -1.26
SNX29-207ENST00000568949 ANAPC11Q9NYG5 84 aa7.21□□□□□ -1.26
SNX29-207ENST00000568949 H3BRM9 83 aa7.2□□□□□ -1.26
SNX29-207ENST00000568949 LINC01547P58512 204 aaPredicted RBP7.2□□□□□ -1.26
SNX29-207ENST00000568949 CST9LQ9H4G1 147 aa7.2□□□□□ -1.26
SNX29-207ENST00000568949 HSBP1O75506 76 aa7.19□□□□□ -1.26
SNX29-207ENST00000568949 CXCL5P42830 114 aa7.19□□□□□ -1.26
SNX29-207ENST00000568949 CKS1BP61024 79 aa7.19□□□□□ -1.26
SNX29-207ENST00000568949 C6orf226Q5I0X4 101 aa7.19□□□□□ -1.26
SNX29-207ENST00000568949 LINC00469Q8N7U9 141 aa7.19□□□□□ -1.26
SNX29-207ENST00000568949 XAGE1AQ9HD64 81 aa7.19□□□□□ -1.26
SNX29-207ENST00000568949 TRGC2P03986 189 aa7.18□□□□□ -1.26
SNX29-207ENST00000568949 Q8IZM0 81 aa7.18□□□□□ -1.26
SNX29-207ENST00000568949 PPDPFQ9H3Y8 114 aa7.18□□□□□ -1.26
SNX29-207ENST00000568949 NDUFA6P56556 154 aa7.17□□□□□ -1.26
SNX29-207ENST00000568949 PDZD11Q5EBL8 140 aa7.17□□□□□ -1.26
SNX29-207ENST00000568949 KRTAP13-1Q8IUC0 172 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms