RNA–Protein interactions for RNA: ENST00000567188.5

CNOT1-211, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 1 (best)

Gene CNOT1, Length 7,830 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-211ENST00000567188 LINC00482Q8N8I6 264 aa4.4□□□□□ -1.71
CNOT1-211ENST00000567188 C8orf87E5RJ46 101 aa4.4□□□□□ -1.71
CNOT1-211ENST00000567188 Q6ZSV7 163 aa4.4□□□□□ -1.71
CNOT1-211ENST00000567188 DCANP1Q8TF63 244 aa4.4□□□□□ -1.71
CNOT1-211ENST00000567188 FAM19A4Q96LR4 140 aa4.4□□□□□ -1.71
CNOT1-211ENST00000567188 CRIP2P52943 208 aaPredicted RBP4.39□□□□□ -1.71
CNOT1-211ENST00000567188 RETNLBQ9BQ08 111 aa4.39□□□□□ -1.71
CNOT1-211ENST00000567188 DCHS1Q96JQ0 3298 aa4.39□□□□□ -1.71
CNOT1-211ENST00000567188 VPS13CQ709C8 3753 aa4.39□□□□□ -1.71
CNOT1-211ENST00000567188 Q8N3U1 123 aa4.39□□□□□ -1.71
CNOT1-211ENST00000567188 PSPHP1O15172 72 aa4.39□□□□□ -1.71
CNOT1-211ENST00000567188 LINC00336Q6ZUF6 198 aa4.39□□□□□ -1.71
CNOT1-211ENST00000567188 IGLV10-54A0A075B6I4 117 aa4.38□□□□□ -1.71
CNOT1-211ENST00000567188 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.38□□□□□ -1.71
CNOT1-211ENST00000567188 UNQ9165/PRO28630Q6UXU0 137 aa4.38□□□□□ -1.71
CNOT1-211ENST00000567188 TRANK1O15050 2925 aa4.38□□□□□ -1.71
CNOT1-211ENST00000567188 IGLV2-18A0A075B6J9 118 aa4.38□□□□□ -1.71
CNOT1-211ENST00000567188 IGLV2-11P01706 119 aa4.38□□□□□ -1.71
CNOT1-211ENST00000567188 IGHV3-38A0A0C4DH36 116 aa4.38□□□□□ -1.71
CNOT1-211ENST00000567188 ACYP2P14621 99 aa4.38□□□□□ -1.71
CNOT1-211ENST00000567188 LY6LH3BQJ8 138 aa4.38□□□□□ -1.71
CNOT1-211ENST00000567188 MRGPRG-AS1Q2M3A8 158 aa4.38□□□□□ -1.71
CNOT1-211ENST00000567188 LINC00208Q96KT6 92 aa4.38□□□□□ -1.71
CNOT1-211ENST00000567188 TNFRSF13BO14836 293 aaPredicted RBP4.37□□□□□ -1.71
CNOT1-211ENST00000567188 POLR2KP53803 58 aaKnown RBP4.37□□□□□ -1.71
CNOT1-211ENST00000567188 COX17Q14061 63 aa4.37□□□□□ -1.71
CNOT1-211ENST00000567188 RNASE13Q5GAN3 156 aaKnown RBP4.37□□□□□ -1.71
CNOT1-211ENST00000567188 CCDC140Q96MF4 163 aa4.37□□□□□ -1.71
CNOT1-211ENST00000567188 A0A096LNI7 61 aa4.37□□□□□ -1.71
CNOT1-211ENST00000567188 A0A096LNJ9 63 aa4.37□□□□□ -1.71
CNOT1-211ENST00000567188 KLK12Q9UKR0 248 aa4.37□□□□□ -1.71
CNOT1-211ENST00000567188 TTC28Q96AY4 2481 aa4.37□□□□□ -1.71
CNOT1-211ENST00000567188 NBPF19A0A087WUL8 3843 aa4.37□□□□□ -1.71
CNOT1-211ENST00000567188 IGIPA6NJ69 53 aa4.37□□□□□ -1.71
CNOT1-211ENST00000567188 ZNF73O43830 326 aaPredicted RBP4.37□□□□□ -1.71
CNOT1-211ENST00000567188 DHRS4-AS1Q9P1J3 65 aa4.37□□□□□ -1.71
CNOT1-211ENST00000567188 SPG11Q96JI7 2443 aa4.37□□□□□ -1.71
CNOT1-211ENST00000567188 BRI3O95415 125 aa4.37□□□□□ -1.71
CNOT1-211ENST00000567188 KLKP1Q107X0 134 aa4.37□□□□□ -1.71
CNOT1-211ENST00000567188 C1orf158Q8N1D5 194 aa4.37□□□□□ -1.71
CNOT1-211ENST00000567188 LINC01561Q8N1V8 128 aa4.37□□□□□ -1.71
CNOT1-211ENST00000567188 SCXQ7RTU7 201 aa4.37□□□□□ -1.71
CNOT1-211ENST00000567188 ZNF580Q9UK33 172 aa4.36□□□□□ -1.71
CNOT1-211ENST00000567188 LINC00846Q9NV44 126 aa4.36□□□□□ -1.71
CNOT1-211ENST00000567188 LINC01600Q96MT4 127 aa4.36□□□□□ -1.71
CNOT1-211ENST00000567188 FAM30AQ9NZY2 134 aa4.36□□□□□ -1.71
CNOT1-211ENST00000567188 IGLV4-69A0A075B6H9 119 aa4.36□□□□□ -1.71
CNOT1-211ENST00000567188 C1orf134Q5TEV5 83 aa4.36□□□□□ -1.71
CNOT1-211ENST00000567188 CDKN2A-AS1Q9UH64 79 aa4.36□□□□□ -1.71
CNOT1-211ENST00000567188 BRWD1-AS2P59051 145 aa4.36□□□□□ -1.71
CNOT1-211ENST00000567188 LINC01547P58512 204 aaPredicted RBP4.35□□□□□ -1.71
CNOT1-211ENST00000567188 SMIM11BQ8TCY0 68 aa4.35□□□□□ -1.71
CNOT1-211ENST00000567188 POM121L12Q8N7R1 296 aa4.35□□□□□ -1.71
CNOT1-211ENST00000567188 WDR87Q6ZQQ6 2873 aa4.35□□□□□ -1.71
CNOT1-211ENST00000567188 PTPN13Q12923 2485 aa4.35□□□□□ -1.71
CNOT1-211ENST00000567188 CEMP1Q6PRD7 247 aaPredicted RBP4.35□□□□□ -1.71
CNOT1-211ENST00000567188 Q8N814 137 aa4.35□□□□□ -1.71
CNOT1-211ENST00000567188 HIVEP2P31629 2446 aa4.35□□□□□ -1.71
CNOT1-211ENST00000567188 AKAP9Q99996 3911 aa4.35□□□□□ -1.71
CNOT1-211ENST00000567188 ZFAND2AQ8N6M9 145 aa4.35□□□□□ -1.71
CNOT1-211ENST00000567188 TRBV6-8A0A0A6YYG3 113 aa4.35□□□□□ -1.71
CNOT1-211ENST00000567188 HCG22E2RYF7 251 aa4.34□□□□□ -1.71
CNOT1-211ENST00000567188 M0QY20 66 aa4.34□□□□□ -1.71
CNOT1-211ENST00000567188 LINC01006Q8NI28 216 aa4.34□□□□□ -1.71
CNOT1-211ENST00000567188 LINC00467Q9BRT7 94 aa4.34□□□□□ -1.71
CNOT1-211ENST00000567188 PRAC2D3DTV9 90 aa4.34□□□□□ -1.72
CNOT1-211ENST00000567188 SLPIP03973 132 aa4.34□□□□□ -1.72
CNOT1-211ENST00000567188 PRO0255Q9UI72 69 aa4.34□□□□□ -1.72
CNOT1-211ENST00000567188 TRBV6-4A0A1B0GX49 114 aa4.34□□□□□ -1.72
CNOT1-211ENST00000567188 ELOF1P60002 83 aaKnown RBP4.33□□□□□ -1.72
CNOT1-211ENST00000567188 ZFAND3Q9H8U3 227 aa4.33□□□□□ -1.72
CNOT1-211ENST00000567188 CIRBP-AS1Q8TBR5 109 aa4.33□□□□□ -1.72
CNOT1-211ENST00000567188 TSHBP01222 138 aa4.33□□□□□ -1.72
CNOT1-211ENST00000567188 CRIP1P50238 77 aa4.33□□□□□ -1.72
CNOT1-211ENST00000567188 C6orf99Q4VX62 202 aa4.33□□□□□ -1.72
CNOT1-211ENST00000567188 K7EQG2 157 aa4.33□□□□□ -1.72
CNOT1-211ENST00000567188 Q6ZQY7 126 aa4.32□□□□□ -1.72
CNOT1-211ENST00000567188 LOC110117498A0A087WWA1 95 aa4.32□□□□□ -1.72
CNOT1-211ENST00000567188 IGLV9-49A0A0B4J1Y8 123 aa4.32□□□□□ -1.72
CNOT1-211ENST00000567188 SPAG11AQ6PDA7 123 aa4.32□□□□□ -1.72
CNOT1-211ENST00000567188 MYO9AB2RTY4 2548 aa4.32□□□□□ -1.72
CNOT1-211ENST00000567188 CYSRT1A8MQ03 144 aa4.32□□□□□ -1.72
CNOT1-211ENST00000567188 KRTAP10-3P60369 221 aa4.32□□□□□ -1.72
CNOT1-211ENST00000567188 KLLNB2CW77 178 aa4.31□□□□□ -1.72
CNOT1-211ENST00000567188 M0R378 163 aa4.31□□□□□ -1.72
CNOT1-211ENST00000567188 WFDC10BQ8IUB3 73 aa4.31□□□□□ -1.72
CNOT1-211ENST00000567188 AMELXQ99217 191 aa4.31□□□□□ -1.72
CNOT1-211ENST00000567188 MAP6D1Q9H9H5 199 aa4.31□□□□□ -1.72
CNOT1-211ENST00000567188 DEFB114Q30KQ6 69 aa4.31□□□□□ -1.72
CNOT1-211ENST00000567188 KRTAP1-3Q8IUG1 177 aa4.31□□□□□ -1.72
CNOT1-211ENST00000567188 KRTAP24-1Q3LI83 254 aa4.31□□□□□ -1.72
CNOT1-211ENST00000567188 HIVEP3Q5T1R4 2406 aa4.3□□□□□ -1.72
CNOT1-211ENST00000567188 Q8IZM0 81 aa4.3□□□□□ -1.72
CNOT1-211ENST00000567188 ZFHX2Q9C0A1 2572 aaPredicted RBP4.3□□□□□ -1.72
CNOT1-211ENST00000567188 TSPEAR-AS2P59090 65 aa4.3□□□□□ -1.72
CNOT1-211ENST00000567188 C10orf25Q5T742 122 aa4.3□□□□□ -1.72
CNOT1-211ENST00000567188 IGHV4-30-4P0DP06 118 aa4.3□□□□□ -1.72
CNOT1-211ENST00000567188 BDP1A6H8Y1 2624 aa4.29□□□□□ -1.72
CNOT1-211ENST00000567188 RPL37AP8A6NKH3 93 aa4.29□□□□□ -1.72
CNOT1-211ENST00000567188 A0A087WYN8 130 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 138.6 ms