RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 TRAV1-1A0A0B4J248 108 aa0.61□□□□□ -2.31
SMG1-212ENST00000566328 IGHV1-24A0A0C4DH33 117 aa0.61□□□□□ -2.31
SMG1-212ENST00000566328 TRBV10-1A0A0K0K1A3 114 aa0.61□□□□□ -2.31
SMG1-212ENST00000566328 LINC00959A0A1B0GUT2 108 aa0.61□□□□□ -2.31
SMG1-212ENST00000566328 XKRY2A2RUG3 117 aa0.61□□□□□ -2.31
SMG1-212ENST00000566328 SDHAF1A6NFY7 115 aa0.61□□□□□ -2.31
SMG1-212ENST00000566328 HIGD1CA8MV81 97 aa0.61□□□□□ -2.31
SMG1-212ENST00000566328 CCL25O15444 150 aa0.61□□□□□ -2.31
SMG1-212ENST00000566328 GATCO43716 136 aaKnown RBP0.61□□□□□ -2.31
SMG1-212ENST00000566328 OR5AL1P0C617 328 aa0.61□□□□□ -2.31
SMG1-212ENST00000566328 SEC11BP0C7V7 166 aa0.61□□□□□ -2.31
SMG1-212ENST00000566328 IGLC6P0CF74 106 aa0.61□□□□□ -2.31
SMG1-212ENST00000566328 PET100P0DJ07 73 aa0.61□□□□□ -2.31
SMG1-212ENST00000566328 BCL2P10415 239 aa0.61□□□□□ -2.31
SMG1-212ENST00000566328 FGF6P10767 208 aa0.61□□□□□ -2.31
SMG1-212ENST00000566328 ADCYAP1P18509 176 aa0.61□□□□□ -2.31
SMG1-212ENST00000566328 PMCHP20382 165 aa0.61□□□□□ -2.31
SMG1-212ENST00000566328 GNG4P50150 75 aa0.61□□□□□ -2.31
SMG1-212ENST00000566328 SULT1A2P50226 295 aa0.61□□□□□ -2.31
SMG1-212ENST00000566328 RAB5BP61020 215 aa0.61□□□□□ -2.31
SMG1-212ENST00000566328 RPL37AP61513 92 aaKnown RBP0.61□□□□□ -2.31
SMG1-212ENST00000566328 RPL23P62829 140 aaKnown RBP0.61□□□□□ -2.31
SMG1-212ENST00000566328 PRR3P79522 188 aaKnown RBP0.61□□□□□ -2.31
SMG1-212ENST00000566328 RHOHQ15669 191 aa0.61□□□□□ -2.31
SMG1-212ENST00000566328 PMCHL1Q16048 86 aa0.61□□□□□ -2.31
SMG1-212ENST00000566328 IQCJQ1A5X6 159 aa0.61□□□□□ -2.31
SMG1-212ENST00000566328 TMEM241Q24JQ0 296 aa0.61□□□□□ -2.31
SMG1-212ENST00000566328 MRPL51Q4U2R6 128 aaKnown RBP0.61□□□□□ -2.31
SMG1-212ENST00000566328 MRPL54Q6P161 138 aaKnown RBP0.61□□□□□ -2.31
SMG1-212ENST00000566328 KCNIP4Q6PIL6 250 aa0.61□□□□□ -2.31
SMG1-212ENST00000566328 RASL11AQ6T310 242 aa0.61□□□□□ -2.31
SMG1-212ENST00000566328 C2orf82Q6UX34 121 aa0.61□□□□□ -2.31
SMG1-212ENST00000566328 Q6ZRU5 148 aa0.61□□□□□ -2.31
SMG1-212ENST00000566328 Q6ZSA8 131 aa0.61□□□□□ -2.31
SMG1-212ENST00000566328 ZFP82Q8N141 532 aa0.61□□□□□ -2.31
SMG1-212ENST00000566328 ZNF664Q8N3J9 261 aa0.61□□□□□ -2.31
SMG1-212ENST00000566328 ARL6IP6Q8N6S5 226 aa0.61□□□□□ -2.31
SMG1-212ENST00000566328 LINC00469Q8N7U9 141 aa0.61□□□□□ -2.31
SMG1-212ENST00000566328 C9orf163Q8N9P6 203 aa0.61□□□□□ -2.31
SMG1-212ENST00000566328 Q8NDZ9 215 aa0.61□□□□□ -2.31
SMG1-212ENST00000566328 OR5A1Q8NGJ0 315 aa0.61□□□□□ -2.31
SMG1-212ENST00000566328 PTH2Q96A98 100 aa0.61□□□□□ -2.31
SMG1-212ENST00000566328 TMEM243Q9BU79 118 aa0.61□□□□□ -2.31
SMG1-212ENST00000566328 NKX6-2Q9C056 277 aaPredicted RBP0.61□□□□□ -2.31
SMG1-212ENST00000566328 RPP21Q9H633 154 aaKnown RBP0.61□□□□□ -2.31
SMG1-212ENST00000566328 ST20Q9HBF5 79 aa0.61□□□□□ -2.31
SMG1-212ENST00000566328 CDC42SE2Q9NRR3 84 aa0.61□□□□□ -2.31
SMG1-212ENST00000566328 KCNIP2Q9NS61 270 aa0.61□□□□□ -2.31
SMG1-212ENST00000566328 TMEM242Q9NWH2 141 aa0.61□□□□□ -2.31
SMG1-212ENST00000566328 VAX2Q9UIW0 290 aa0.61□□□□□ -2.31
SMG1-212ENST00000566328 V9GYV3 84 aa0.61□□□□□ -2.31
SMG1-212ENST00000566328 TRBV25-1A0A075B6N4 114 aa0.6□□□□□ -2.31
SMG1-212ENST00000566328 IGHV3-64A0A075B6Q5 118 aa0.6□□□□□ -2.31
SMG1-212ENST00000566328 A0A087WWC5 75 aa0.6□□□□□ -2.31
SMG1-212ENST00000566328 A0A1B0GUT8 65 aa0.6□□□□□ -2.31
SMG1-212ENST00000566328 A0A1B0GVX0 72 aa0.6□□□□□ -2.31
SMG1-212ENST00000566328 SMIM27A0A1W2PRY6 76 aa0.6□□□□□ -2.31
SMG1-212ENST00000566328 A8MWL6 223 aa0.6□□□□□ -2.31
SMG1-212ENST00000566328 UMAD1C9J7I0 102 aa0.6□□□□□ -2.31
SMG1-212ENST00000566328 D6R8Y8 96 aa0.6□□□□□ -2.31
SMG1-212ENST00000566328 F2Z2F3 143 aa0.6□□□□□ -2.31
SMG1-212ENST00000566328 I3L3M4 83 aa0.6□□□□□ -2.31
SMG1-212ENST00000566328 UBE2L6O14933 153 aa0.6□□□□□ -2.31
SMG1-212ENST00000566328 NPYP01303 97 aa0.6□□□□□ -2.31
SMG1-212ENST00000566328 CRPP02741 224 aa0.6□□□□□ -2.31
SMG1-212ENST00000566328 S100A9P06702 114 aaKnown RBP0.6□□□□□ -2.31
SMG1-212ENST00000566328 ESDP10768 282 aa0.6□□□□□ -2.31
SMG1-212ENST00000566328 RAB5AP20339 215 aa0.6□□□□□ -2.31
SMG1-212ENST00000566328 CKS2P33552 79 aa0.6□□□□□ -2.31
SMG1-212ENST00000566328 IFI27P40305 119 aaPredicted RBP0.6□□□□□ -2.31
SMG1-212ENST00000566328 POLR2KP53803 58 aaKnown RBP0.6□□□□□ -2.31
SMG1-212ENST00000566328 NDUFA6P56556 154 aa0.6□□□□□ -2.31
SMG1-212ENST00000566328 RPS20P60866 119 aaKnown RBP0.6□□□□□ -2.31
SMG1-212ENST00000566328 IFITM2Q01629 132 aa0.6□□□□□ -2.31
SMG1-212ENST00000566328 RPL18AQ02543 176 aaKnown RBP0.6□□□□□ -2.31
SMG1-212ENST00000566328 Q0VG73 95 aa0.6□□□□□ -2.31
SMG1-212ENST00000566328 COTL1Q14019 142 aa0.6□□□□□ -2.31
SMG1-212ENST00000566328 ZNF345Q14585 488 aa0.6□□□□□ -2.31
SMG1-212ENST00000566328 KIAA0087Q14695 138 aa0.6□□□□□ -2.31
SMG1-212ENST00000566328 ELOBQ15370 118 aa0.6□□□□□ -2.31
SMG1-212ENST00000566328 SS18Q15532 418 aa0.6□□□□□ -2.31
SMG1-212ENST00000566328 ADIRFQ15847 76 aa0.6□□□□□ -2.31
SMG1-212ENST00000566328 MIAQ16674 131 aa0.6□□□□□ -2.31
SMG1-212ENST00000566328 C1orf137Q5JT78 98 aa0.6□□□□□ -2.31
SMG1-212ENST00000566328 FAM104BQ5XKR9 115 aa0.6□□□□□ -2.31
SMG1-212ENST00000566328 AMMECR1LQ6DCA0 310 aa0.6□□□□□ -2.31
SMG1-212ENST00000566328 TMEM136Q6ZRR5 245 aa0.6□□□□□ -2.31
SMG1-212ENST00000566328 FAM231DQ6ZW35 169 aa0.6□□□□□ -2.31
SMG1-212ENST00000566328 FAM19A5Q7Z5A7 132 aaPredicted RBP0.6□□□□□ -2.31
SMG1-212ENST00000566328 AKAP14Q86UN6 197 aa0.6□□□□□ -2.31
SMG1-212ENST00000566328 SLC51BQ86UW2 128 aa0.6□□□□□ -2.31
SMG1-212ENST00000566328 TCTE3Q8IZS6 198 aa0.6□□□□□ -2.31
SMG1-212ENST00000566328 C10orf126Q8N4M7 172 aa0.6□□□□□ -2.31
SMG1-212ENST00000566328 MIR7-3HGQ8N6C7 128 aa0.6□□□□□ -2.31
SMG1-212ENST00000566328 SPACA4Q8TDM5 124 aa0.6□□□□□ -2.31
SMG1-212ENST00000566328 ISOC2Q96AB3 205 aa0.6□□□□□ -2.31
SMG1-212ENST00000566328 FAM210AQ96ND0 272 aa0.6□□□□□ -2.31
SMG1-212ENST00000566328 IMMP2LQ96T52 175 aa0.6□□□□□ -2.31
SMG1-212ENST00000566328 RETNLBQ9BQ08 111 aa0.6□□□□□ -2.31
SMG1-212ENST00000566328 SMIM7Q9BQ49 75 aa0.6□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms