RNA–Protein interactions for RNA: ENST00000566200.1

ABCA3-204, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 3

Gene ABCA3, Length 1,232 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-204ENST00000566200 K7EMI3 77 aa11.13□□□□□ -0.63
ABCA3-204ENST00000566200 A0A087X002 238 aa11.12□□□□□ -0.63
ABCA3-204ENST00000566200 F8VRH5 84 aa11.12□□□□□ -0.63
ABCA3-204ENST00000566200 HERVK_113P63121 156 aa11.12□□□□□ -0.63
ABCA3-204ENST00000566200 PNRC1Q12796 327 aaPredicted RBP11.12□□□□□ -0.63
ABCA3-204ENST00000566200 ANAPC16Q96DE5 110 aa11.12□□□□□ -0.63
ABCA3-204ENST00000566200 LBHQ53QV2 105 aaPredicted RBP11.11□□□□□ -0.63
ABCA3-204ENST00000566200 MRPL55Q7Z7F7 128 aaKnown RBP11.11□□□□□ -0.63
ABCA3-204ENST00000566200 NXT2Q9NPJ8 142 aaKnown RBP11.11□□□□□ -0.63
ABCA3-204ENST00000566200 TP73-AS1Q9UF72 201 aa11.11□□□□□ -0.63
ABCA3-204ENST00000566200 MT-ND4LP03901 98 aa11.1□□□□□ -0.63
ABCA3-204ENST00000566200 TIMM17AQ99595 171 aa11.1□□□□□ -0.63
ABCA3-204ENST00000566200 TSPAN13O95857 204 aa11.09□□□□□ -0.63
ABCA3-204ENST00000566200 SEC11AP67812 179 aa11.09□□□□□ -0.63
ABCA3-204ENST00000566200 TOMM6Q96B49 74 aa11.09□□□□□ -0.63
ABCA3-204ENST00000566200 GEMIN7Q9H840 131 aaKnown RBP11.09□□□□□ -0.63
ABCA3-204ENST00000566200 SMIM1B2RUZ4 78 aa11.08□□□□□ -0.64
ABCA3-204ENST00000566200 BCE1O60756 84 aa11.08□□□□□ -0.64
ABCA3-204ENST00000566200 PAPPA-AS1Q5QFB9 102 aa11.07□□□□□ -0.64
ABCA3-204ENST00000566200 LINC00167Q96N53 147 aa11.07□□□□□ -0.64
ABCA3-204ENST00000566200 RPL37AP8A6NKH3 93 aa11.06□□□□□ -0.64
ABCA3-204ENST00000566200 CXCL5P42830 114 aa11.06□□□□□ -0.64
ABCA3-204ENST00000566200 RPL28P46779 137 aaKnown RBP11.06□□□□□ -0.64
ABCA3-204ENST00000566200 ADCYAP1P18509 176 aa11.05□□□□□ -0.64
ABCA3-204ENST00000566200 KIAA1644Q3SXP7 199 aa11.05□□□□□ -0.64
ABCA3-204ENST00000566200 ERASQ7Z444 233 aa11.05□□□□□ -0.64
ABCA3-204ENST00000566200 IGLV5-45A0A087WSX0 123 aa11.04□□□□□ -0.64
ABCA3-204ENST00000566200 ANAPC11Q9NYG5 84 aa11.04□□□□□ -0.64
ABCA3-204ENST00000566200 G0S2P27469 103 aa11.03□□□□□ -0.64
ABCA3-204ENST00000566200 PDZD11Q5EBL8 140 aa11.03□□□□□ -0.64
ABCA3-204ENST00000566200 KRTAP13-1Q8IUC0 172 aa11.03□□□□□ -0.64
ABCA3-204ENST00000566200 COX7B2Q8TF08 81 aa11.03□□□□□ -0.64
ABCA3-204ENST00000566200 TINCRA0A1B0GVN0 87 aa11.02□□□□□ -0.65
ABCA3-204ENST00000566200 GAGE10A6NGK3 116 aa11.02□□□□□ -0.65
ABCA3-204ENST00000566200 CRYGAP11844 174 aa11.02□□□□□ -0.65
ABCA3-204ENST00000566200 KRTAP13-2Q52LG2 175 aa11.02□□□□□ -0.65
ABCA3-204ENST00000566200 TYMSOSQ8TAI1 123 aa11.02□□□□□ -0.65
ABCA3-204ENST00000566200 SCGB3A1Q96QR1 104 aa11.02□□□□□ -0.65
ABCA3-204ENST00000566200 IGLV5-37A0A075B6J1 123 aa11.01□□□□□ -0.65
ABCA3-204ENST00000566200 LINC01546A6NGU7 62 aa10.99□□□□□ -0.65
ABCA3-204ENST00000566200 SPINK8P0C7L1 97 aa10.99□□□□□ -0.65
ABCA3-204ENST00000566200 RAB5BP61020 215 aa10.99□□□□□ -0.65
ABCA3-204ENST00000566200 CST9LQ9H4G1 147 aa10.99□□□□□ -0.65
ABCA3-204ENST00000566200 SCO1O75880 301 aa10.98□□□□□ -0.65
ABCA3-204ENST00000566200 FAT4Q6V0I7 4981 aa10.95□□□□□ -0.66
ABCA3-204ENST00000566200 RAB14P61106 215 aa10.95□□□□□ -0.66
ABCA3-204ENST00000566200 IGKV2-28A0A075B6P5 120 aa10.94□□□□□ -0.66
ABCA3-204ENST00000566200 IGKV2D-28P01615 120 aa10.94□□□□□ -0.66
ABCA3-204ENST00000566200 UBE2AP49459 152 aa10.94□□□□□ -0.66
ABCA3-204ENST00000566200 PMVKQ15126 192 aa10.94□□□□□ -0.66
ABCA3-204ENST00000566200 NKAPP1Q8N9T2 125 aa10.94□□□□□ -0.66
ABCA3-204ENST00000566200 RETNLBQ9BQ08 111 aa10.94□□□□□ -0.66
ABCA3-204ENST00000566200 MUC17Q685J3 4493 aa10.94□□□□□ -0.66
ABCA3-204ENST00000566200 TRAV9-1A0A075B6T8 112 aa10.93□□□□□ -0.66
ABCA3-204ENST00000566200 A0A0U1RQV1 116 aa10.92□□□□□ -0.66
ABCA3-204ENST00000566200 LINC01549A6NIU2 74 aa10.92□□□□□ -0.66
ABCA3-204ENST00000566200 FAM229BQ4G0N7 80 aa10.92□□□□□ -0.66
ABCA3-204ENST00000566200 LCE2AQ5TA79 106 aaPredicted RBP10.92□□□□□ -0.66
ABCA3-204ENST00000566200 GNB1LQ9BYB4 327 aa10.92□□□□□ -0.66
ABCA3-204ENST00000566200 CLLU1Q5K131 121 aa10.91□□□□□ -0.66
ABCA3-204ENST00000566200 MRPL18Q9H0U6 180 aaKnown RBP10.91□□□□□ -0.66
ABCA3-204ENST00000566200 IGLV5-39A0A0G2JS06 123 aa10.9□□□□□ -0.66
ABCA3-204ENST00000566200 ATP5LO75964 103 aa10.9□□□□□ -0.66
ABCA3-204ENST00000566200 VPREB1P12018 145 aa10.9□□□□□ -0.66
ABCA3-204ENST00000566200 PRLHP81277 87 aa10.9□□□□□ -0.66
ABCA3-204ENST00000566200 LINC00304Q8N9R0 145 aa10.9□□□□□ -0.66
ABCA3-204ENST00000566200 Q8NDZ9 215 aa10.9□□□□□ -0.66
ABCA3-204ENST00000566200 PFN2P35080 140 aa10.89□□□□□ -0.67
ABCA3-204ENST00000566200 KRTAP9-2Q9BYQ4 174 aa10.89□□□□□ -0.67
ABCA3-204ENST00000566200 TMEM218A2RU14 115 aa10.88□□□□□ -0.67
ABCA3-204ENST00000566200 TMEM238C9JI98 176 aa10.88□□□□□ -0.67
ABCA3-204ENST00000566200 H3BRM9 83 aa10.88□□□□□ -0.67
ABCA3-204ENST00000566200 IGLC3P0DOY3 106 aa10.88□□□□□ -0.67
ABCA3-204ENST00000566200 TMEM126AQ9H061 195 aa10.88□□□□□ -0.67
ABCA3-204ENST00000566200 SND1-IT1Q9HBX3 110 aa10.88□□□□□ -0.67
ABCA3-204ENST00000566200 A0A096LNJ9 63 aa10.87□□□□□ -0.67
ABCA3-204ENST00000566200 ZNF22P17026 224 aaPredicted RBP10.86□□□□□ -0.67
ABCA3-204ENST00000566200 FA2HQ7L5A8 372 aa10.86□□□□□ -0.67
ABCA3-204ENST00000566200 ERG28Q9UKR5 140 aa10.86□□□□□ -0.67
ABCA3-204ENST00000566200 M0R378 163 aa10.85□□□□□ -0.67
ABCA3-204ENST00000566200 FAM19A1Q7Z5A9 133 aa10.85□□□□□ -0.67
ABCA3-204ENST00000566200 URB1-AS1Q96HZ7 61 aa10.85□□□□□ -0.67
ABCA3-204ENST00000566200 IGKV2D-26A0A0A0MRZ7 120 aa10.84□□□□□ -0.67
ABCA3-204ENST00000566200 TPRXLQ17RH7 258 aa10.84□□□□□ -0.67
ABCA3-204ENST00000566200 UQCC3Q6UW78 93 aa10.84□□□□□ -0.67
ABCA3-204ENST00000566200 SMCO4Q9NRQ5 59 aa10.84□□□□□ -0.67
ABCA3-204ENST00000566200 S100PP25815 95 aa10.83□□□□□ -0.68
ABCA3-204ENST00000566200 PLEKHB2Q96CS7 222 aa10.83□□□□□ -0.68
ABCA3-204ENST00000566200 ZNF625Q96I27 306 aaPredicted RBP10.83□□□□□ -0.68
ABCA3-204ENST00000566200 FABP9Q0Z7S8 132 aa10.82□□□□□ -0.68
ABCA3-204ENST00000566200 C3orf22Q8N5N4 141 aa10.82□□□□□ -0.68
ABCA3-204ENST00000566200 IGLV7-46A0A075B6I9 117 aa10.81□□□□□ -0.68
ABCA3-204ENST00000566200 NDUFA6P56556 154 aa10.81□□□□□ -0.68
ABCA3-204ENST00000566200 COX17Q14061 63 aa10.81□□□□□ -0.68
ABCA3-204ENST00000566200 SEC11CQ9BY50 192 aa10.81□□□□□ -0.68
ABCA3-204ENST00000566200 COX19Q49B96 90 aa10.8□□□□□ -0.68
ABCA3-204ENST00000566200 CDIP1Q9H305 208 aa10.8□□□□□ -0.68
ABCA3-204ENST00000566200 C11orf86A6NJI1 115 aa10.79□□□□□ -0.68
ABCA3-204ENST00000566200 CTAG1AP78358 180 aa10.79□□□□□ -0.68
ABCA3-204ENST00000566200 RPL24P83731 157 aaKnown RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms