RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 MUC2Q02817 5179 aa7.86□□□□□ -1.15
RNF40-208ENST00000565995 MRPS36P82909 103 aaKnown RBP7.85□□□□□ -1.15
RNF40-208ENST00000565995 CHCHD10Q8WYQ3 142 aaPredicted RBP7.85□□□□□ -1.15
RNF40-208ENST00000565995 PACRGQ96M98 296 aaPredicted RBP7.85□□□□□ -1.15
RNF40-208ENST00000565995 HIST1H2BLQ99880 126 aa7.85□□□□□ -1.15
RNF40-208ENST00000565995 MAP1LC3CQ9BXW4 147 aa7.85□□□□□ -1.15
RNF40-208ENST00000565995 CDC42SE2Q9NRR3 84 aa7.85□□□□□ -1.15
RNF40-208ENST00000565995 NPSP0C0P6 89 aa7.84□□□□□ -1.15
RNF40-208ENST00000565995 KRTDAPP60985 99 aa7.84□□□□□ -1.15
RNF40-208ENST00000565995 ZC2HC1BQ5TFG8 222 aa7.84□□□□□ -1.15
RNF40-208ENST00000565995 TRAV13-1A0A0B4J241 112 aa7.83□□□□□ -1.16
RNF40-208ENST00000565995 FOXI1Q12951 378 aa7.83□□□□□ -1.16
RNF40-208ENST00000565995 PMVKQ15126 192 aa7.83□□□□□ -1.16
RNF40-208ENST00000565995 KRTAP9-2Q9BYQ4 174 aa7.82□□□□□ -1.16
RNF40-208ENST00000565995 C3orf79P0CE67 100 aa7.81□□□□□ -1.16
RNF40-208ENST00000565995 SS18Q15532 418 aa7.81□□□□□ -1.16
RNF40-208ENST00000565995 OR10D4PQ8NGN7 298 aa7.81□□□□□ -1.16
RNF40-208ENST00000565995 FAM104AQ969W3 186 aa7.81□□□□□ -1.16
RNF40-208ENST00000565995 AMELXQ99217 191 aa7.81□□□□□ -1.16
RNF40-208ENST00000565995 PSORS1C2Q9UIG4 136 aa7.81□□□□□ -1.16
RNF40-208ENST00000565995 C20orf202A1L168 122 aa7.8□□□□□ -1.16
RNF40-208ENST00000565995 SYS1-DBNDD2H3BUS1 97 aa7.8□□□□□ -1.16
RNF40-208ENST00000565995 CST9LQ9H4G1 147 aa7.8□□□□□ -1.16
RNF40-208ENST00000565995 CHTOPQ9Y3Y2 248 aaKnown RBP7.8□□□□□ -1.16
RNF40-208ENST00000565995 TRAV12-1A0A0B4J245 112 aa7.79□□□□□ -1.16
RNF40-208ENST00000565995 IGHV1-58A0A0C4DH39 117 aa7.79□□□□□ -1.16
RNF40-208ENST00000565995 LINC00959A0A1B0GUT2 108 aa7.79□□□□□ -1.16
RNF40-208ENST00000565995 XCL1P47992 114 aa7.79□□□□□ -1.16
RNF40-208ENST00000565995 AKR1D1P51857 326 aa7.79□□□□□ -1.16
RNF40-208ENST00000565995 PTTG1IPP53801 180 aa7.79□□□□□ -1.16
RNF40-208ENST00000565995 PET117Q6UWS5 81 aa7.79□□□□□ -1.16
RNF40-208ENST00000565995 CARD19Q96LW7 228 aa7.79□□□□□ -1.16
RNF40-208ENST00000565995 PMCHL2Q9BQD1 86 aa7.79□□□□□ -1.16
RNF40-208ENST00000565995 GEMIN7Q9H840 131 aaKnown RBP7.79□□□□□ -1.16
RNF40-208ENST00000565995 CCL25O15444 150 aa7.78□□□□□ -1.16
RNF40-208ENST00000565995 UBE2D1P51668 147 aa7.78□□□□□ -1.16
RNF40-208ENST00000565995 SEC11AP67812 179 aa7.78□□□□□ -1.16
RNF40-208ENST00000565995 F8VRH5 84 aa7.77□□□□□ -1.17
RNF40-208ENST00000565995 SYCNQ0VAF6 134 aa7.77□□□□□ -1.17
RNF40-208ENST00000565995 LINC00526Q96FQ7 95 aa7.77□□□□□ -1.17
RNF40-208ENST00000565995 MRPL35Q9NZE8 188 aaKnown RBP7.77□□□□□ -1.17
RNF40-208ENST00000565995 LOC107984640A0A0U1RRK4 108 aa7.76□□□□□ -1.17
RNF40-208ENST00000565995 A0A1W2PNN7 141 aa7.76□□□□□ -1.17
RNF40-208ENST00000565995 DPM2O94777 84 aa7.76□□□□□ -1.17
RNF40-208ENST00000565995 SCGB1D1O95968 90 aa7.76□□□□□ -1.17
RNF40-208ENST00000565995 PLNP26678 52 aa7.76□□□□□ -1.17
RNF40-208ENST00000565995 HERVK_113P63121 156 aa7.76□□□□□ -1.17
RNF40-208ENST00000565995 LINC00242Q5T6M2 205 aa7.76□□□□□ -1.17
RNF40-208ENST00000565995 LINC00469Q8N7U9 141 aa7.76□□□□□ -1.17
RNF40-208ENST00000565995 IGLV4-69A0A075B6H9 119 aa7.75□□□□□ -1.17
RNF40-208ENST00000565995 ZNF561-AS1K7EIQ3 104 aa7.75□□□□□ -1.17
RNF40-208ENST00000565995 IGLC3P0DOY3 106 aa7.75□□□□□ -1.17
RNF40-208ENST00000565995 TMEM170BQ5T4T1 132 aa7.75□□□□□ -1.17
RNF40-208ENST00000565995 LINC01545Q5VT33 79 aa7.75□□□□□ -1.17
RNF40-208ENST00000565995 TINCRA0A1B0GVN0 87 aa7.74□□□□□ -1.17
RNF40-208ENST00000565995 C11orf86A6NJI1 115 aa7.74□□□□□ -1.17
RNF40-208ENST00000565995 IGKCP01834 107 aa7.74□□□□□ -1.17
RNF40-208ENST00000565995 MALP21145 153 aa7.74□□□□□ -1.17
RNF40-208ENST00000565995 CD164L2Q6UWJ8 174 aa7.74□□□□□ -1.17
RNF40-208ENST00000565995 H3BRM9 83 aa7.73□□□□□ -1.17
RNF40-208ENST00000565995 COX7A2LO14548 114 aa7.73□□□□□ -1.17
RNF40-208ENST00000565995 C5orf38Q86SI9 138 aa7.73□□□□□ -1.17
RNF40-208ENST00000565995 ATOH7Q8N100 152 aa7.73□□□□□ -1.17
RNF40-208ENST00000565995 PRR26Q8N8Z3 221 aa7.73□□□□□ -1.17
RNF40-208ENST00000565995 A0A0U1RQV1 116 aa7.72□□□□□ -1.17
RNF40-208ENST00000565995 ZNF22P17026 224 aaPredicted RBP7.72□□□□□ -1.17
RNF40-208ENST00000565995 GAGE2BQ13066 116 aa7.72□□□□□ -1.17
RNF40-208ENST00000565995 LCE2AQ5TA79 106 aaPredicted RBP7.72□□□□□ -1.17
RNF40-208ENST00000565995 FAM19A3Q7Z5A8 133 aa7.72□□□□□ -1.17
RNF40-208ENST00000565995 DIRC1Q969H9 104 aa7.72□□□□□ -1.17
RNF40-208ENST00000565995 CDKN2A-AS1Q9UH64 79 aa7.72□□□□□ -1.17
RNF40-208ENST00000565995 IGLV1-50A0A075B6I6 118 aa7.71□□□□□ -1.18
RNF40-208ENST00000565995 IGLV7-43P04211 117 aa7.71□□□□□ -1.18
RNF40-208ENST00000565995 SPINK8P0C7L1 97 aa7.71□□□□□ -1.18
RNF40-208ENST00000565995 C9orf116Q5BN46 136 aaPredicted RBP7.71□□□□□ -1.18
RNF40-208ENST00000565995 C1orf137Q5JT78 98 aa7.71□□□□□ -1.18
RNF40-208ENST00000565995 IGLV5-45A0A087WSX0 123 aa7.7□□□□□ -1.18
RNF40-208ENST00000565995 IGHV3OR16-9A0A0B4J2B5 98 aa7.7□□□□□ -1.18
RNF40-208ENST00000565995 APOMO95445 188 aa7.7□□□□□ -1.18
RNF40-208ENST00000565995 HERVK_113P61574 105 aa7.7□□□□□ -1.18
RNF40-208ENST00000565995 RNF151Q2KHN1 245 aa7.7□□□□□ -1.18
RNF40-208ENST00000565995 C2orf48Q96LS8 159 aa7.7□□□□□ -1.18
RNF40-208ENST00000565995 FAT4Q6V0I7 4981 aa7.69□□□□□ -1.18
RNF40-208ENST00000565995 HSBP1L1C9JCN9 74 aa7.69□□□□□ -1.18
RNF40-208ENST00000565995 H0Y9J4 135 aa7.69□□□□□ -1.18
RNF40-208ENST00000565995 KRTAP1-4P0C5Y4 121 aa7.69□□□□□ -1.18
RNF40-208ENST00000565995 JOSD1Q15040 202 aaPredicted RBP7.69□□□□□ -1.18
RNF40-208ENST00000565995 PHF5AQ7RTV0 110 aaKnown RBP7.69□□□□□ -1.18
RNF40-208ENST00000565995 A0A087WZ39 114 aa7.68□□□□□ -1.18
RNF40-208ENST00000565995 LOC105371267A0A1B0GV96 52 aa7.68□□□□□ -1.18
RNF40-208ENST00000565995 ORAOV1Q8WV07 137 aa7.68□□□□□ -1.18
RNF40-208ENST00000565995 TOMM7Q9P0U1 55 aa7.68□□□□□ -1.18
RNF40-208ENST00000565995 KRTAP9-6A0A140TA67 174 aa7.67□□□□□ -1.18
RNF40-208ENST00000565995 TMEM223A0PJW6 202 aa7.67□□□□□ -1.18
RNF40-208ENST00000565995 SMIM1B2RUZ4 78 aa7.67□□□□□ -1.18
RNF40-208ENST00000565995 PRSS2P07478 247 aa7.67□□□□□ -1.18
RNF40-208ENST00000565995 PYY3Q5JQD4 70 aa7.67□□□□□ -1.18
RNF40-208ENST00000565995 CAMK2N2Q96S95 79 aa7.67□□□□□ -1.18
RNF40-208ENST00000565995 SPAG11BQ08648 103 aa7.66□□□□□ -1.18
RNF40-208ENST00000565995 KRTAP11-1Q8IUC1 163 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 134.7 ms