RNA–Protein interactions for RNA: ENST00000565634.5

UBFD1-204, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 724 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-204ENST00000565634 LRCOL1A6NCL2 159 aa3.99□□□□□ -1.77
UBFD1-204ENST00000565634 C1orf196B1AJZ1 125 aa3.99□□□□□ -1.77
UBFD1-204ENST00000565634 HNRNPA3P51991 378 aaKnown RBP3.99□□□□□ -1.77
UBFD1-204ENST00000565634 ORMDL2Q53FV1 153 aa3.99□□□□□ -1.77
UBFD1-204ENST00000565634 OR5A1Q8NGJ0 315 aa3.99□□□□□ -1.77
UBFD1-204ENST00000565634 AMELXQ99217 191 aa3.99□□□□□ -1.77
UBFD1-204ENST00000565634 TIMM21Q9BVV7 248 aa3.99□□□□□ -1.77
UBFD1-204ENST00000565634 PYGO1Q9Y3Y4 419 aa3.99□□□□□ -1.77
UBFD1-204ENST00000565634 IGKV2D-24A0A075B6R9 120 aa3.98□□□□□ -1.77
UBFD1-204ENST00000565634 H7C423 109 aa3.98□□□□□ -1.77
UBFD1-204ENST00000565634 CCL25O15444 150 aa3.98□□□□□ -1.77
UBFD1-204ENST00000565634 MT1HL1P0DM35 61 aa3.98□□□□□ -1.77
UBFD1-204ENST00000565634 KRTAP10-4P60372 401 aaPredicted RBP3.98□□□□□ -1.77
UBFD1-204ENST00000565634 RAB5BP61020 215 aa3.98□□□□□ -1.77
UBFD1-204ENST00000565634 COA6Q5JTJ3 125 aaKnown RBP3.98□□□□□ -1.77
UBFD1-204ENST00000565634 KRTAP5-11Q6L8G4 156 aa3.98□□□□□ -1.77
UBFD1-204ENST00000565634 C5orf38Q86SI9 138 aa3.98□□□□□ -1.77
UBFD1-204ENST00000565634 CHCHD10Q8WYQ3 142 aaPredicted RBP3.98□□□□□ -1.77
UBFD1-204ENST00000565634 CHCHD1Q96BP2 118 aaKnown RBP3.98□□□□□ -1.77
UBFD1-204ENST00000565634 LINC00526Q96FQ7 95 aa3.98□□□□□ -1.77
UBFD1-204ENST00000565634 PMCHL2Q9BQD1 86 aa3.98□□□□□ -1.77
UBFD1-204ENST00000565634 KRTAP2-2Q9BYT5 123 aa3.98□□□□□ -1.77
UBFD1-204ENST00000565634 CST9LQ9H4G1 147 aa3.98□□□□□ -1.77
UBFD1-204ENST00000565634 CYSLTR1Q9Y271 337 aa3.98□□□□□ -1.77
UBFD1-204ENST00000565634 CSDC2Q9Y534 153 aaKnown RBP3.98□□□□□ -1.77
UBFD1-204ENST00000565634 HBDP02042 147 aa3.97□□□□□ -1.77
UBFD1-204ENST00000565634 XCL1P47992 114 aa3.97□□□□□ -1.77
UBFD1-204ENST00000565634 UBE2D1P51668 147 aa3.97□□□□□ -1.77
UBFD1-204ENST00000565634 MRPS36P82909 103 aaKnown RBP3.97□□□□□ -1.77
UBFD1-204ENST00000565634 LINC01620Q4KN68 170 aa3.97□□□□□ -1.77
UBFD1-204ENST00000565634 LINC00242Q5T6M2 205 aa3.97□□□□□ -1.77
UBFD1-204ENST00000565634 TMEM141Q96I45 108 aa3.97□□□□□ -1.77
UBFD1-204ENST00000565634 TMEM101Q96IK0 257 aa3.97□□□□□ -1.77
UBFD1-204ENST00000565634 VCX2Q9H322 139 aa3.97□□□□□ -1.77
UBFD1-204ENST00000565634 SPANXA1Q9NS26 97 aa3.97□□□□□ -1.77
UBFD1-204ENST00000565634 IGLV4-69A0A075B6H9 119 aa3.96□□□□□ -1.78
UBFD1-204ENST00000565634 IGLV5-45A0A087WSX0 123 aa3.96□□□□□ -1.78
UBFD1-204ENST00000565634 TRAV9-2A0A087WT02 112 aa3.96□□□□□ -1.78
UBFD1-204ENST00000565634 H0Y8G0 127 aa3.96□□□□□ -1.78
UBFD1-204ENST00000565634 K7EMI3 77 aa3.96□□□□□ -1.78
UBFD1-204ENST00000565634 IGKV2-30P06310 120 aa3.96□□□□□ -1.78
UBFD1-204ENST00000565634 PRSS1P07477 247 aa3.96□□□□□ -1.78
UBFD1-204ENST00000565634 ZNF25P17030 456 aaPredicted RBP3.96□□□□□ -1.78
UBFD1-204ENST00000565634 TTC32Q5I0X7 151 aa3.96□□□□□ -1.78
UBFD1-204ENST00000565634 HIST3H2BBQ8N257 126 aa3.96□□□□□ -1.78
UBFD1-204ENST00000565634 IFI27L1Q96BM0 104 aa3.96□□□□□ -1.78
UBFD1-204ENST00000565634 TIMM17AQ99595 171 aa3.96□□□□□ -1.78
UBFD1-204ENST00000565634 TNXBP22105 4242 aa3.95□□□□□ -1.78
UBFD1-204ENST00000565634 A0A087WZ39 114 aa3.95□□□□□ -1.78
UBFD1-204ENST00000565634 TRAV8-3A0A0A6YYJ7 113 aa3.95□□□□□ -1.78
UBFD1-204ENST00000565634 IGHV3OR16-9A0A0B4J2B5 98 aa3.95□□□□□ -1.78
UBFD1-204ENST00000565634 HSBP1O75506 76 aa3.95□□□□□ -1.78
UBFD1-204ENST00000565634 KRTAP10-6P60371 365 aaPredicted RBP3.95□□□□□ -1.78
UBFD1-204ENST00000565634 C15orf56Q8N910 161 aa3.95□□□□□ -1.78
UBFD1-204ENST00000565634 C11orf86A6NJI1 115 aa3.94□□□□□ -1.78
UBFD1-204ENST00000565634 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.94□□□□□ -1.78
UBFD1-204ENST00000565634 LEPROTL1O95214 131 aa3.94□□□□□ -1.78
UBFD1-204ENST00000565634 C3orf79P0CE67 100 aa3.94□□□□□ -1.78
UBFD1-204ENST00000565634 PMVKQ15126 192 aa3.94□□□□□ -1.78
UBFD1-204ENST00000565634 SS18Q15532 418 aa3.94□□□□□ -1.78
UBFD1-204ENST00000565634 MIAQ16674 131 aa3.94□□□□□ -1.78
UBFD1-204ENST00000565634 HIGD2BQ4VC39 106 aa3.94□□□□□ -1.78
UBFD1-204ENST00000565634 C10orf126Q8N4M7 172 aa3.94□□□□□ -1.78
UBFD1-204ENST00000565634 C2orf48Q96LS8 159 aa3.94□□□□□ -1.78
UBFD1-204ENST00000565634 HIST1H2BLQ99880 126 aa3.94□□□□□ -1.78
UBFD1-204ENST00000565634 MRPL35Q9NZE8 188 aaKnown RBP3.94□□□□□ -1.78
UBFD1-204ENST00000565634 CDKN2A-AS1Q9UH64 79 aa3.94□□□□□ -1.78
UBFD1-204ENST00000565634 LPAP08519 4548 aa3.94□□□□□ -1.78
UBFD1-204ENST00000565634 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.93□□□□□ -1.78
UBFD1-204ENST00000565634 TRAV8-4A0A0B4J246 113 aa3.93□□□□□ -1.78
UBFD1-204ENST00000565634 CRPP02741 224 aa3.93□□□□□ -1.78
UBFD1-204ENST00000565634 KIAA0087Q14695 138 aa3.93□□□□□ -1.78
UBFD1-204ENST00000565634 TEX43Q6ZNM6 134 aa3.93□□□□□ -1.78
UBFD1-204ENST00000565634 FAM19A3Q7Z5A8 133 aa3.93□□□□□ -1.78
UBFD1-204ENST00000565634 IGHV3-64A0A075B6Q5 118 aa3.92□□□□□ -1.78
UBFD1-204ENST00000565634 TINCRA0A1B0GVN0 87 aa3.92□□□□□ -1.78
UBFD1-204ENST00000565634 SYS1-DBNDD2H3BUS1 97 aa3.92□□□□□ -1.78
UBFD1-204ENST00000565634 K7EP13 123 aa3.92□□□□□ -1.78
UBFD1-204ENST00000565634 PSCAO43653 123 aa3.92□□□□□ -1.78
UBFD1-204ENST00000565634 ATP5LO75964 103 aa3.92□□□□□ -1.78
UBFD1-204ENST00000565634 SPINK8P0C7L1 97 aa3.92□□□□□ -1.78
UBFD1-204ENST00000565634 IGLC3P0DOY3 106 aa3.92□□□□□ -1.78
UBFD1-204ENST00000565634 ZNF22P17026 224 aaPredicted RBP3.92□□□□□ -1.78
UBFD1-204ENST00000565634 PKIAP61925 76 aa3.92□□□□□ -1.78
UBFD1-204ENST00000565634 C2orf82Q6UX34 121 aa3.92□□□□□ -1.78
UBFD1-204ENST00000565634 UNQ6190/PRO20217Q6UXQ8 127 aa3.92□□□□□ -1.78
UBFD1-204ENST00000565634 Q6ZN92 141 aa3.92□□□□□ -1.78
UBFD1-204ENST00000565634 SCXQ7RTU7 201 aa3.92□□□□□ -1.78
UBFD1-204ENST00000565634 NFE4Q86UQ8 179 aa3.92□□□□□ -1.78
UBFD1-204ENST00000565634 FAM218AQ96MZ4 157 aa3.92□□□□□ -1.78
UBFD1-204ENST00000565634 CHTOPQ9Y3Y2 248 aaKnown RBP3.92□□□□□ -1.78
UBFD1-204ENST00000565634 TRAV12-1A0A0B4J245 112 aa3.91□□□□□ -1.78
UBFD1-204ENST00000565634 PANO1I0J062 215 aa3.91□□□□□ -1.78
UBFD1-204ENST00000565634 COX7A2LO14548 114 aa3.91□□□□□ -1.78
UBFD1-204ENST00000565634 G0S2P27469 103 aa3.91□□□□□ -1.78
UBFD1-204ENST00000565634 KRTDAPP60985 99 aa3.91□□□□□ -1.78
UBFD1-204ENST00000565634 SRSF9Q13242 221 aaKnown RBP eCLIP3.91□□□□□ -1.78
UBFD1-204ENST00000565634 C9orf116Q5BN46 136 aaPredicted RBP3.91□□□□□ -1.78
UBFD1-204ENST00000565634 ATOH7Q8N100 152 aa3.91□□□□□ -1.78
UBFD1-204ENST00000565634 STPG4Q8N801 248 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 257.4 ms