RNA–Protein interactions for RNA: ENST00000565324.5

SMG1-211, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 12,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-211ENST00000565324 Q6YL49 198 aa3.71□□□□□ -1.82
SMG1-211ENST00000565324 CIRBP-AS1Q8TBR5 109 aa3.7□□□□□ -1.82
SMG1-211ENST00000565324 COL27A1Q8IZC6 1860 aaPredicted RBP3.7□□□□□ -1.82
SMG1-211ENST00000565324 A0A087WVE0 104 aa3.7□□□□□ -1.82
SMG1-211ENST00000565324 OXLD1Q5BKU9 147 aa3.7□□□□□ -1.82
SMG1-211ENST00000565324 ATP11AUNQ6ZP68 121 aa3.7□□□□□ -1.82
SMG1-211ENST00000565324 AMELXQ99217 191 aa3.7□□□□□ -1.82
SMG1-211ENST00000565324 A0A087WYN8 130 aa3.7□□□□□ -1.82
SMG1-211ENST00000565324 BRWD1-AS2P59051 145 aa3.7□□□□□ -1.82
SMG1-211ENST00000565324 Q9BRP9 147 aa3.7□□□□□ -1.82
SMG1-211ENST00000565324 A0A1B0GUV1 79 aa3.69□□□□□ -1.82
SMG1-211ENST00000565324 TTC28Q96AY4 2481 aa3.69□□□□□ -1.82
SMG1-211ENST00000565324 C2orf48Q96LS8 159 aa3.69□□□□□ -1.82
SMG1-211ENST00000565324 CEP350Q5VT06 3117 aa3.69□□□□□ -1.82
SMG1-211ENST00000565324 SHISA2Q6UWI4 295 aa3.69□□□□□ -1.82
SMG1-211ENST00000565324 C7orf65Q6ZTY9 151 aa3.69□□□□□ -1.82
SMG1-211ENST00000565324 BBC3Q96PG8 261 aaPredicted RBP3.69□□□□□ -1.82
SMG1-211ENST00000565324 PSMG3-AS1Q96PY0 264 aa3.69□□□□□ -1.82
SMG1-211ENST00000565324 LMO4P61968 165 aa3.69□□□□□ -1.82
SMG1-211ENST00000565324 F8P00451 2351 aa3.69□□□□□ -1.82
SMG1-211ENST00000565324 COX8CQ7Z4L0 72 aa3.69□□□□□ -1.82
SMG1-211ENST00000565324 PROK1P58294 105 aa3.68□□□□□ -1.82
SMG1-211ENST00000565324 LINC00242Q5T6M2 205 aa3.68□□□□□ -1.82
SMG1-211ENST00000565324 Q8N2B8 174 aa3.68□□□□□ -1.82
SMG1-211ENST00000565324 ANKRD17O75179 2603 aaKnown RBP3.68□□□□□ -1.82
SMG1-211ENST00000565324 A0A087WSZ3 146 aa3.68□□□□□ -1.82
SMG1-211ENST00000565324 CYP4F30PQ9H0H9 118 aa3.68□□□□□ -1.82
SMG1-211ENST00000565324 CDIP1Q9H305 208 aa3.68□□□□□ -1.82
SMG1-211ENST00000565324 COL4A3Q01955 1670 aa3.68□□□□□ -1.82
SMG1-211ENST00000565324 NUPR2A6NF83 97 aa3.68□□□□□ -1.82
SMG1-211ENST00000565324 CRIP2P52943 208 aaPredicted RBP3.68□□□□□ -1.82
SMG1-211ENST00000565324 LINC00482Q8N8I6 264 aa3.68□□□□□ -1.82
SMG1-211ENST00000565324 SPINK1P00995 79 aa3.67□□□□□ -1.82
SMG1-211ENST00000565324 UNQ6190/PRO20217Q6UXQ8 127 aa3.67□□□□□ -1.82
SMG1-211ENST00000565324 SPINT4Q6UDR6 99 aa3.67□□□□□ -1.82
SMG1-211ENST00000565324 SBSPONQ8IVN8 264 aa3.67□□□□□ -1.82
SMG1-211ENST00000565324 C6orf48Q9UBA6 75 aa3.67□□□□□ -1.82
SMG1-211ENST00000565324 ERC2-IT1O76042 136 aa3.67□□□□□ -1.82
SMG1-211ENST00000565324 TRAV22A0A0B4J277 110 aa3.66□□□□□ -1.82
SMG1-211ENST00000565324 C11orf21Q9P2W6 132 aa3.66□□□□□ -1.82
SMG1-211ENST00000565324 ZNF580Q9UK33 172 aa3.66□□□□□ -1.82
SMG1-211ENST00000565324 PCOTHQ58A44 107 aa3.66□□□□□ -1.82
SMG1-211ENST00000565324 ADAMTSL4-AS1Q5T5F5 129 aa3.66□□□□□ -1.82
SMG1-211ENST00000565324 MKI67P46013 3256 aaKnown RBP3.66□□□□□ -1.82
SMG1-211ENST00000565324 PLA2G2AP14555 144 aa3.66□□□□□ -1.82
SMG1-211ENST00000565324 LINC00846Q9NV44 126 aa3.66□□□□□ -1.82
SMG1-211ENST00000565324 IGLV1-40P01703 118 aa3.66□□□□□ -1.82
SMG1-211ENST00000565324 PRR9Q5T870 116 aa3.66□□□□□ -1.82
SMG1-211ENST00000565324 LINC00310P59036 64 aa3.66□□□□□ -1.82
SMG1-211ENST00000565324 MUC22E2RYF6 1773 aaPredicted RBP3.66□□□□□ -1.82
SMG1-211ENST00000565324 C6orf223Q8N319 242 aa3.65□□□□□ -1.82
SMG1-211ENST00000565324 Q6ZPA2 131 aa3.65□□□□□ -1.82
SMG1-211ENST00000565324 NHLRC4P0CG21 123 aaPredicted RBP3.65□□□□□ -1.82
SMG1-211ENST00000565324 PRLHP81277 87 aa3.65□□□□□ -1.82
SMG1-211ENST00000565324 COX6A2Q02221 97 aa3.65□□□□□ -1.83
SMG1-211ENST00000565324 MSMPQ1L6U9 139 aa3.65□□□□□ -1.83
SMG1-211ENST00000565324 PRR3P79522 188 aaKnown RBP3.65□□□□□ -1.83
SMG1-211ENST00000565324 C4orf26Q17RF5 130 aa3.65□□□□□ -1.83
SMG1-211ENST00000565324 ZFYVE26Q68DK2 2539 aa3.65□□□□□ -1.83
SMG1-211ENST00000565324 IGKV2D-30A0A075B6S6 120 aa3.65□□□□□ -1.83
SMG1-211ENST00000565324 IGKV2-30P06310 120 aa3.65□□□□□ -1.83
SMG1-211ENST00000565324 CD164Q04900 197 aa3.65□□□□□ -1.83
SMG1-211ENST00000565324 LOC110117498A0A087WWA1 95 aa3.65□□□□□ -1.83
SMG1-211ENST00000565324 Q6ZSV7 163 aa3.65□□□□□ -1.83
SMG1-211ENST00000565324 C9orf116Q5BN46 136 aaPredicted RBP3.65□□□□□ -1.83
SMG1-211ENST00000565324 FSHBP01225 129 aa3.64□□□□□ -1.83
SMG1-211ENST00000565324 LINC01546A6NGU7 62 aa3.64□□□□□ -1.83
SMG1-211ENST00000565324 LINC00337Q8N6G1 96 aa3.64□□□□□ -1.83
SMG1-211ENST00000565324 TLN1Q9Y490 2541 aaKnown RBP3.64□□□□□ -1.83
SMG1-211ENST00000565324 TSPEAR-AS2P59090 65 aa3.64□□□□□ -1.83
SMG1-211ENST00000565324 SMIM29Q86T20 159 aa3.64□□□□□ -1.83
SMG1-211ENST00000565324 FN1P02751 2386 aaKnown RBP3.63□□□□□ -1.83
SMG1-211ENST00000565324 NOTCH2Q04721 2471 aa3.63□□□□□ -1.83
SMG1-211ENST00000565324 C11orf72Q8NBR9 251 aa3.63□□□□□ -1.83
SMG1-211ENST00000565324 ACANP16112 2415 aa3.63□□□□□ -1.83
SMG1-211ENST00000565324 C11orf71Q6IPW1 123 aa3.63□□□□□ -1.83
SMG1-211ENST00000565324 URB1-AS1Q96HZ7 61 aa3.63□□□□□ -1.83
SMG1-211ENST00000565324 FLG2Q5D862 2391 aaPredicted RBP3.63□□□□□ -1.83
SMG1-211ENST00000565324 KMT2BQ9UMN6 2715 aaPredicted RBP3.63□□□□□ -1.83
SMG1-211ENST00000565324 BRI3O95415 125 aa3.63□□□□□ -1.83
SMG1-211ENST00000565324 BDP1A6H8Y1 2624 aa3.62□□□□□ -1.83
SMG1-211ENST00000565324 GAS8-AS1O95177 125 aa3.62□□□□□ -1.83
SMG1-211ENST00000565324 LOC101927531A0A1B0GV80 90 aa3.62□□□□□ -1.83
SMG1-211ENST00000565324 MOBPQ13875 183 aa3.62□□□□□ -1.83
SMG1-211ENST00000565324 IGLV2-18A0A075B6J9 118 aa3.62□□□□□ -1.83
SMG1-211ENST00000565324 IGLV5-39A0A0G2JS06 123 aa3.62□□□□□ -1.83
SMG1-211ENST00000565324 CRIP3Q6Q6R5 217 aa3.62□□□□□ -1.83
SMG1-211ENST00000565324 SPATA3Q8NHX4 192 aa3.62□□□□□ -1.83
SMG1-211ENST00000565324 LINC01006Q8NI28 216 aa3.61□□□□□ -1.83
SMG1-211ENST00000565324 UQCR11O14957 56 aa3.61□□□□□ -1.83
SMG1-211ENST00000565324 C1orf229Q6ZS94 237 aaPredicted RBP3.61□□□□□ -1.83
SMG1-211ENST00000565324 FHL2Q14192 279 aa3.61□□□□□ -1.83
SMG1-211ENST00000565324 ELOF1P60002 83 aaKnown RBP3.61□□□□□ -1.83
SMG1-211ENST00000565324 PIEZO2Q9H5I5 2752 aa3.61□□□□□ -1.83
SMG1-211ENST00000565324 CRIPTQ9P021 101 aa3.61□□□□□ -1.83
SMG1-211ENST00000565324 IGLV5-52A0A0A0MRZ9 124 aa3.6□□□□□ -1.83
SMG1-211ENST00000565324 SSBP3-AS1Q7Z2R9 100 aa3.6□□□□□ -1.83
SMG1-211ENST00000565324 PLA2G1BP04054 148 aaKnown RBP3.6□□□□□ -1.83
SMG1-211ENST00000565324 LINC01556Q5JQF7 62 aa3.6□□□□□ -1.83
SMG1-211ENST00000565324 A0A096LNJ9 63 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms