RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 DEFB135Q30KP9 77 aa9.05□□□□□ -0.96
COMMD4-209ENST00000564068 SPTBN5Q9NRC6 3674 aaKnown RBP9.05□□□□□ -0.96
COMMD4-209ENST00000564068 IGSF10Q6WRI0 2623 aa9.05□□□□□ -0.96
COMMD4-209ENST00000564068 HILS1P60008 231 aa9.05□□□□□ -0.96
COMMD4-209ENST00000564068 MAST4O15021 2626 aa9.05□□□□□ -0.96
COMMD4-209ENST00000564068 IGLV4-60A0A075B6I1 120 aa9.04□□□□□ -0.96
COMMD4-209ENST00000564068 LINC00959A0A1B0GUT2 108 aa9.04□□□□□ -0.96
COMMD4-209ENST00000564068 FUSP35637 526 aaKnown RBP eCLIP9.04□□□□□ -0.96
COMMD4-209ENST00000564068 HIGD2BQ4VC39 106 aa9.04□□□□□ -0.96
COMMD4-209ENST00000564068 FAM19A4Q96LR4 140 aa9.04□□□□□ -0.96
COMMD4-209ENST00000564068 TRBV6-4A0A1B0GX49 114 aa9.04□□□□□ -0.96
COMMD4-209ENST00000564068 REG3AQ06141 175 aa9.04□□□□□ -0.96
COMMD4-209ENST00000564068 FAM218AQ96MZ4 157 aa9.04□□□□□ -0.96
COMMD4-209ENST00000564068 IGKV2D-24A0A075B6R9 120 aa9.04□□□□□ -0.96
COMMD4-209ENST00000564068 INAFM1C9JVW0 142 aa9.04□□□□□ -0.96
COMMD4-209ENST00000564068 EIF4EBP3O60516 100 aaPredicted RBP9.04□□□□□ -0.96
COMMD4-209ENST00000564068 SOSTDC1Q6X4U4 206 aa9.04□□□□□ -0.96
COMMD4-209ENST00000564068 PDE6GP18545 87 aa9.04□□□□□ -0.96
COMMD4-209ENST00000564068 CCKP06307 115 aa9.03□□□□□ -0.96
COMMD4-209ENST00000564068 Q6YL49 198 aa9.03□□□□□ -0.96
COMMD4-209ENST00000564068 COX7BP24311 80 aa9.03□□□□□ -0.96
COMMD4-209ENST00000564068 ZNF702PQ9H963 129 aa9.03□□□□□ -0.96
COMMD4-209ENST00000564068 C9orf116Q5BN46 136 aaPredicted RBP9.02□□□□□ -0.97
COMMD4-209ENST00000564068 ODF3L2Q3SX64 289 aa9.01□□□□□ -0.97
COMMD4-209ENST00000564068 ATRQ13535 2644 aa9.01□□□□□ -0.97
COMMD4-209ENST00000564068 BOD1L1Q8NFC6 3051 aa9.01□□□□□ -0.97
COMMD4-209ENST00000564068 BPY2O14599 106 aa9.01□□□□□ -0.97
COMMD4-209ENST00000564068 LITAFQ99732 161 aa9.01□□□□□ -0.97
COMMD4-209ENST00000564068 KIR2DL5BQ8NHK3 375 aa9.01□□□□□ -0.97
COMMD4-209ENST00000564068 SMR3AQ99954 134 aa9□□□□□ -0.97
COMMD4-209ENST00000564068 APOC4P55056 127 aa9□□□□□ -0.97
COMMD4-209ENST00000564068 ZNF575Q86XF7 245 aa9□□□□□ -0.97
COMMD4-209ENST00000564068 C1orf158Q8N1D5 194 aa9□□□□□ -0.97
COMMD4-209ENST00000564068 DEFB121Q5J5C9 76 aa8.99□□□□□ -0.97
COMMD4-209ENST00000564068 NTM-AS1Q6ZSK4 140 aa8.99□□□□□ -0.97
COMMD4-209ENST00000564068 DMXL2Q8TDJ6 3036 aa8.99□□□□□ -0.97
COMMD4-209ENST00000564068 IGLV5-39A0A0G2JS06 123 aa8.99□□□□□ -0.97
COMMD4-209ENST00000564068 IGHV4-31P0DP07 118 aa8.99□□□□□ -0.97
COMMD4-209ENST00000564068 Q8N814 137 aa8.99□□□□□ -0.97
COMMD4-209ENST00000564068 UBE2BP63146 152 aa8.98□□□□□ -0.97
COMMD4-209ENST00000564068 ETDCA0A1B0GVM5 59 aa8.98□□□□□ -0.97
COMMD4-209ENST00000564068 C3orf84H3BNL1 204 aa8.98□□□□□ -0.97
COMMD4-209ENST00000564068 A8MTW9 85 aa8.97□□□□□ -0.97
COMMD4-209ENST00000564068 SMCR5Q8TEV8 140 aa8.97□□□□□ -0.97
COMMD4-209ENST00000564068 DMXL1Q9Y485 3027 aa8.97□□□□□ -0.97
COMMD4-209ENST00000564068 NDUFC2-KCTD14E9PQ53 114 aa8.97□□□□□ -0.97
COMMD4-209ENST00000564068 ITPR3Q14573 2671 aa8.97□□□□□ -0.97
COMMD4-209ENST00000564068 A0A087WZ39 114 aa8.97□□□□□ -0.97
COMMD4-209ENST00000564068 SPART-AS1P0CW21 52 aa8.97□□□□□ -0.97
COMMD4-209ENST00000564068 CRYGAP11844 174 aa8.97□□□□□ -0.97
COMMD4-209ENST00000564068 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.97□□□□□ -0.97
COMMD4-209ENST00000564068 DNAJC9-AS1A6NH13 148 aa8.96□□□□□ -0.97
COMMD4-209ENST00000564068 BEAN1Q3B7T3 259 aa8.96□□□□□ -0.97
COMMD4-209ENST00000564068 LY6G6DO95868 133 aa8.96□□□□□ -0.98
COMMD4-209ENST00000564068 H3BQ85 93 aa8.95□□□□□ -0.98
COMMD4-209ENST00000564068 MGAM2Q2M2H8 2515 aa8.95□□□□□ -0.98
COMMD4-209ENST00000564068 CD164L2Q6UWJ8 174 aa8.95□□□□□ -0.98
COMMD4-209ENST00000564068 BRI3O95415 125 aa8.95□□□□□ -0.98
COMMD4-209ENST00000564068 TRAV7A0A075B6U4 112 aa8.94□□□□□ -0.98
COMMD4-209ENST00000564068 UNQ6190/PRO20217Q6UXQ8 127 aa8.94□□□□□ -0.98
COMMD4-209ENST00000564068 C4orf26Q17RF5 130 aa8.94□□□□□ -0.98
COMMD4-209ENST00000564068 Q8IZM0 81 aa8.94□□□□□ -0.98
COMMD4-209ENST00000564068 PRR4Q16378 134 aa8.94□□□□□ -0.98
COMMD4-209ENST00000564068 Q8N3U1 123 aa8.94□□□□□ -0.98
COMMD4-209ENST00000564068 LINC00482Q8N8I6 264 aa8.94□□□□□ -0.98
COMMD4-209ENST00000564068 WDFY3Q8IZQ1 3526 aa8.94□□□□□ -0.98
COMMD4-209ENST00000564068 FLNAP21333 2647 aaKnown RBP8.93□□□□□ -0.98
COMMD4-209ENST00000564068 C11orf72Q8NBR9 251 aa8.93□□□□□ -0.98
COMMD4-209ENST00000564068 SMIM26A0A096LP01 95 aa8.93□□□□□ -0.98
COMMD4-209ENST00000564068 KALRNO60229 2985 aa8.92□□□□□ -0.98
COMMD4-209ENST00000564068 RMI2Q96E14 147 aa8.92□□□□□ -0.98
COMMD4-209ENST00000564068 LRCOL1A6NCL2 159 aa8.92□□□□□ -0.98
COMMD4-209ENST00000564068 COL27A1Q8IZC6 1860 aaPredicted RBP8.91□□□□□ -0.98
COMMD4-209ENST00000564068 IGLV5-45A0A087WSX0 123 aa8.91□□□□□ -0.98
COMMD4-209ENST00000564068 PSCAO43653 123 aa8.91□□□□□ -0.98
COMMD4-209ENST00000564068 MIFP14174 115 aa8.91□□□□□ -0.98
COMMD4-209ENST00000564068 SERP1Q9Y6X1 66 aa8.91□□□□□ -0.98
COMMD4-209ENST00000564068 CYSRT1A8MQ03 144 aa8.9□□□□□ -0.98
COMMD4-209ENST00000564068 MP68P56378 58 aa8.9□□□□□ -0.98
COMMD4-209ENST00000564068 FAM19A3Q7Z5A8 133 aa8.9□□□□□ -0.98
COMMD4-209ENST00000564068 CELA1Q9UNI1 258 aa8.9□□□□□ -0.99
COMMD4-209ENST00000564068 ADGRG4Q8IZF6 3080 aa8.9□□□□□ -0.99
COMMD4-209ENST00000564068 IGHV3OR16-9A0A0B4J2B5 98 aa8.89□□□□□ -0.99
COMMD4-209ENST00000564068 NDUFC1O43677 76 aa8.89□□□□□ -0.99
COMMD4-209ENST00000564068 FLNCQ14315 2725 aa8.89□□□□□ -0.99
COMMD4-209ENST00000564068 MUC3AQ02505 3323 aa8.89□□□□□ -0.99
COMMD4-209ENST00000564068 CFAP47Q6ZTR5 3102 aa8.89□□□□□ -0.99
COMMD4-209ENST00000564068 IGKV2-28A0A075B6P5 120 aa8.88□□□□□ -0.99
COMMD4-209ENST00000564068 IGKV2D-28P01615 120 aa8.88□□□□□ -0.99
COMMD4-209ENST00000564068 GCN1Q92616 2671 aaKnown RBP8.88□□□□□ -0.99
COMMD4-209ENST00000564068 ZNF73O43830 326 aaPredicted RBP8.88□□□□□ -0.99
COMMD4-209ENST00000564068 TRBV10-3A0A0K0K1G6 114 aa8.88□□□□□ -0.99
COMMD4-209ENST00000564068 Q6ZVQ6 151 aa8.88□□□□□ -0.99
COMMD4-209ENST00000564068 LINC01006Q8NI28 216 aa8.88□□□□□ -0.99
COMMD4-209ENST00000564068 FHL2Q14192 279 aa8.87□□□□□ -0.99
COMMD4-209ENST00000564068 RPS28P62857 69 aaKnown RBP8.87□□□□□ -0.99
COMMD4-209ENST00000564068 LINC01547P58512 204 aaPredicted RBP8.86□□□□□ -0.99
COMMD4-209ENST00000564068 CDK2AP2O75956 126 aa8.86□□□□□ -0.99
COMMD4-209ENST00000564068 COX17Q14061 63 aa8.86□□□□□ -0.99
COMMD4-209ENST00000564068 C6orf223Q8N319 242 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms