RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 LELP1Q5T871 98 aa2.84□□□□□ -1.95
LINC00254-201ENST00000563416 FAM74A4Q5TZK3 123 aa2.84□□□□□ -1.95
LINC00254-201ENST00000563416 SPANXN1Q5VSR9 72 aa2.84□□□□□ -1.95
LINC00254-201ENST00000563416 FAM104BQ5XKR9 115 aa2.84□□□□□ -1.95
LINC00254-201ENST00000563416 ATP6V0E2Q8NHE4 81 aa2.84□□□□□ -1.95
LINC00254-201ENST00000563416 RNASE7Q9H1E1 156 aaKnown RBP2.84□□□□□ -1.95
LINC00254-201ENST00000563416 GTSF1LQ9H1H1 148 aa2.84□□□□□ -1.95
LINC00254-201ENST00000563416 ZNF706Q9Y5V0 76 aaPredicted RBP2.84□□□□□ -1.95
LINC00254-201ENST00000563416 RYR1P21817 5038 aa2.84□□□□□ -1.96
LINC00254-201ENST00000563416 TRBV7-3A0A075B6L6 115 aa2.83□□□□□ -1.96
LINC00254-201ENST00000563416 MUC21A0A0G2JKD1 596 aa2.83□□□□□ -1.96
LINC00254-201ENST00000563416 MUC21A0A140T8X8 626 aa2.83□□□□□ -1.96
LINC00254-201ENST00000563416 TRGC1P0CF51 173 aa2.83□□□□□ -1.96
LINC00254-201ENST00000563416 FOXA3P55318 350 aaPredicted RBP2.83□□□□□ -1.96
LINC00254-201ENST00000563416 UBE2D3P61077 147 aa2.83□□□□□ -1.96
LINC00254-201ENST00000563416 UBE2D2P62837 147 aa2.83□□□□□ -1.96
LINC00254-201ENST00000563416 PEA15Q15121 130 aa2.83□□□□□ -1.96
LINC00254-201ENST00000563416 ZNF56Q15929 161 aa2.83□□□□□ -1.96
LINC00254-201ENST00000563416 TMEM241Q24JQ0 296 aa2.83□□□□□ -1.96
LINC00254-201ENST00000563416 LYZL1Q6UWQ5 148 aa2.83□□□□□ -1.96
LINC00254-201ENST00000563416 C10orf126Q8N4M7 172 aa2.83□□□□□ -1.96
LINC00254-201ENST00000563416 OSTCQ9NRP0 149 aa2.83□□□□□ -1.96
LINC00254-201ENST00000563416 NAT8Q9UHE5 227 aa2.83□□□□□ -1.96
LINC00254-201ENST00000563416 FAT1Q14517 4588 aa2.82□□□□□ -1.96
LINC00254-201ENST00000563416 A0A087WWC5 75 aa2.82□□□□□ -1.96
LINC00254-201ENST00000563416 IBA57-AS1B1ANH7 110 aa2.82□□□□□ -1.96
LINC00254-201ENST00000563416 M0QY20 66 aa2.82□□□□□ -1.96
LINC00254-201ENST00000563416 SMIM17P0DL12 118 aa2.82□□□□□ -1.96
LINC00254-201ENST00000563416 NTF3P20783 257 aa2.82□□□□□ -1.96
LINC00254-201ENST00000563416 EVI2AP22794 236 aa2.82□□□□□ -1.96
LINC00254-201ENST00000563416 IFITM2Q01629 132 aa2.82□□□□□ -1.96
LINC00254-201ENST00000563416 CLLU1Q5K131 121 aa2.82□□□□□ -1.96
LINC00254-201ENST00000563416 FAM19A3Q7Z5A8 133 aa2.82□□□□□ -1.96
LINC00254-201ENST00000563416 COMMD7Q86VX2 200 aa2.82□□□□□ -1.96
LINC00254-201ENST00000563416 TSKUQ8WUA8 353 aa2.82□□□□□ -1.96
LINC00254-201ENST00000563416 DNAJC30Q96LL9 226 aa2.82□□□□□ -1.96
LINC00254-201ENST00000563416 DPH3P1Q9H4G8 78 aa2.82□□□□□ -1.96
LINC00254-201ENST00000563416 V9GYV3 84 aa2.82□□□□□ -1.96
LINC00254-201ENST00000563416 TRBV6-8A0A0A6YYG3 113 aa2.81□□□□□ -1.96
LINC00254-201ENST00000563416 HIGD1CA8MV81 97 aa2.81□□□□□ -1.96
LINC00254-201ENST00000563416 MGPP08493 103 aa2.81□□□□□ -1.96
LINC00254-201ENST00000563416 DDTP30046 118 aa2.81□□□□□ -1.96
LINC00254-201ENST00000563416 RAB14P61106 215 aa2.81□□□□□ -1.96
LINC00254-201ENST00000563416 ADIRFQ15847 76 aa2.81□□□□□ -1.96
LINC00254-201ENST00000563416 TMEM97Q5BJF2 176 aa2.81□□□□□ -1.96
LINC00254-201ENST00000563416 RASL11AQ6T310 242 aa2.81□□□□□ -1.96
LINC00254-201ENST00000563416 Q6ZRU5 148 aa2.81□□□□□ -1.96
LINC00254-201ENST00000563416 DAZ4Q86SG3 579 aaKnown RBP2.81□□□□□ -1.96
LINC00254-201ENST00000563416 NIT1Q86X76 327 aa2.81□□□□□ -1.96
LINC00254-201ENST00000563416 SPANXA2-OT1Q8N9U9 137 aa2.81□□□□□ -1.96
LINC00254-201ENST00000563416 FRZBQ92765 325 aa2.81□□□□□ -1.96
LINC00254-201ENST00000563416 A0A1B0GUT8 65 aa2.8□□□□□ -1.96
LINC00254-201ENST00000563416 SMIM27A0A1W2PRY6 76 aa2.8□□□□□ -1.96
LINC00254-201ENST00000563416 IQCJQ1A5X6 159 aa2.8□□□□□ -1.96
LINC00254-201ENST00000563416 NUP35Q8NFH5 326 aa2.8□□□□□ -1.96
LINC00254-201ENST00000563416 TMEM191AQ9H0A3 160 aa2.8□□□□□ -1.96
LINC00254-201ENST00000563416 NIT2Q9NQR4 276 aa2.8□□□□□ -1.96
LINC00254-201ENST00000563416 NAT8BQ9UHF3 227 aa2.8□□□□□ -1.96
LINC00254-201ENST00000563416 TRBV25-1A0A075B6N4 114 aa2.79□□□□□ -1.96
LINC00254-201ENST00000563416 A0A087WTM6 91 aa2.79□□□□□ -1.96
LINC00254-201ENST00000563416 TRAV26-2A0A0B4J265 109 aa2.79□□□□□ -1.96
LINC00254-201ENST00000563416 TRBV6-5A0A0K0K1A5 114 aa2.79□□□□□ -1.96
LINC00254-201ENST00000563416 LRCOL1A6NCL2 159 aa2.79□□□□□ -1.96
LINC00254-201ENST00000563416 IGHV3-30P01768 117 aa2.79□□□□□ -1.96
LINC00254-201ENST00000563416 IGHV3-33P01772 117 aa2.79□□□□□ -1.96
LINC00254-201ENST00000563416 IGHV3-30-3P0DP02 117 aa2.79□□□□□ -1.96
LINC00254-201ENST00000563416 IGHV3-30-5P0DP03 117 aa2.79□□□□□ -1.96
LINC00254-201ENST00000563416 ADCYAP1P18509 176 aa2.79□□□□□ -1.96
LINC00254-201ENST00000563416 PKIAP61925 76 aa2.79□□□□□ -1.96
LINC00254-201ENST00000563416 BATFQ16520 125 aa2.79□□□□□ -1.96
LINC00254-201ENST00000563416 C1orf195Q5TG92 126 aa2.79□□□□□ -1.96
LINC00254-201ENST00000563416 SMIM15Q7Z3B0 74 aa2.79□□□□□ -1.96
LINC00254-201ENST00000563416 MIR7-3HGQ8N6C7 128 aa2.79□□□□□ -1.96
LINC00254-201ENST00000563416 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.79□□□□□ -1.96
LINC00254-201ENST00000563416 BORCS7Q96B45 105 aa2.79□□□□□ -1.96
LINC00254-201ENST00000563416 RPL39LQ96EH5 51 aaKnown RBP2.79□□□□□ -1.96
LINC00254-201ENST00000563416 PKHD1L1Q86WI1 4243 aa2.79□□□□□ -1.96
LINC00254-201ENST00000563416 A0A087WX48 190 aa2.78□□□□□ -1.96
LINC00254-201ENST00000563416 IGHV1-24A0A0C4DH33 117 aa2.78□□□□□ -1.96
LINC00254-201ENST00000563416 NCR2O95944 276 aa2.78□□□□□ -1.96
LINC00254-201ENST00000563416 RAB5BP61020 215 aa2.78□□□□□ -1.96
LINC00254-201ENST00000563416 ELOBQ15370 118 aa2.78□□□□□ -1.96
LINC00254-201ENST00000563416 ATP5L2Q7Z4Y8 100 aa2.78□□□□□ -1.96
LINC00254-201ENST00000563416 SPATA12Q7Z6I5 190 aa2.78□□□□□ -1.96
LINC00254-201ENST00000563416 AMN1Q8IY45 258 aa2.78□□□□□ -1.96
LINC00254-201ENST00000563416 VPS13BQ7Z7G8 4022 aa2.78□□□□□ -1.96
LINC00254-201ENST00000563416 TRBV24-1A0A075B6N3 115 aa2.77□□□□□ -1.97
LINC00254-201ENST00000563416 TRBV27A0A0K0K1C4 114 aa2.77□□□□□ -1.97
LINC00254-201ENST00000563416 TMEM218A2RU14 115 aa2.77□□□□□ -1.97
LINC00254-201ENST00000563416 LINC00862A6NCI5 91 aa2.77□□□□□ -1.97
LINC00254-201ENST00000563416 SDHAF1A6NFY7 115 aa2.77□□□□□ -1.97
LINC00254-201ENST00000563416 C16orf90A8MZG2 172 aa2.77□□□□□ -1.97
LINC00254-201ENST00000563416 K7ERS5 55 aa2.77□□□□□ -1.97
LINC00254-201ENST00000563416 S100A8P05109 93 aa2.77□□□□□ -1.97
LINC00254-201ENST00000563416 ESDP10768 282 aa2.77□□□□□ -1.97
LINC00254-201ENST00000563416 POLR2KP53803 58 aaKnown RBP2.77□□□□□ -1.97
LINC00254-201ENST00000563416 RBX1P62877 108 aa2.77□□□□□ -1.97
LINC00254-201ENST00000563416 Q0VG73 95 aa2.77□□□□□ -1.97
LINC00254-201ENST00000563416 MIAQ16674 131 aa2.77□□□□□ -1.97
LINC00254-201ENST00000563416 MRPL51Q4U2R6 128 aaKnown RBP2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms