RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 F8VRH5 84 aa10.05□□□□□ -0.8
USB1-208ENST00000563207 FABP4P15090 132 aa10.05□□□□□ -0.8
USB1-208ENST00000563207 MAP1LC3CQ9BXW4 147 aa10.05□□□□□ -0.8
USB1-208ENST00000563207 FAT3Q8TDW7 4589 aa10.05□□□□□ -0.8
USB1-208ENST00000563207 PANO1I0J062 215 aa10.04□□□□□ -0.8
USB1-208ENST00000563207 Q8IZM0 81 aa10.04□□□□□ -0.8
USB1-208ENST00000563207 CARD19Q96LW7 228 aa10.04□□□□□ -0.8
USB1-208ENST00000563207 CAMK2N2Q96S95 79 aa10.04□□□□□ -0.8
USB1-208ENST00000563207 PKHD1L1Q86WI1 4243 aa10.04□□□□□ -0.8
USB1-208ENST00000563207 PRSS2P07478 247 aa10.03□□□□□ -0.8
USB1-208ENST00000563207 KIAA0087Q14695 138 aa10.03□□□□□ -0.8
USB1-208ENST00000563207 RNF151Q2KHN1 245 aa10.03□□□□□ -0.8
USB1-208ENST00000563207 LINC00526Q96FQ7 95 aa10.03□□□□□ -0.8
USB1-208ENST00000563207 KRTAP29-1A8MX34 341 aaPredicted RBP10.02□□□□□ -0.81
USB1-208ENST00000563207 SMIM1B2RUZ4 78 aa10.02□□□□□ -0.81
USB1-208ENST00000563207 NDUFA1O15239 70 aa10.02□□□□□ -0.81
USB1-208ENST00000563207 ZNF22P17026 224 aaPredicted RBP10.02□□□□□ -0.81
USB1-208ENST00000563207 ODF1Q14990 250 aa10.02□□□□□ -0.81
USB1-208ENST00000563207 C6orf226Q5I0X4 101 aa10.02□□□□□ -0.81
USB1-208ENST00000563207 SDIM1Q6ZPB5 146 aa10.02□□□□□ -0.81
USB1-208ENST00000563207 MRPL35Q9NZE8 188 aaKnown RBP10.02□□□□□ -0.81
USB1-208ENST00000563207 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.02□□□□□ -0.81
USB1-208ENST00000563207 C11orf86A6NJI1 115 aa10.01□□□□□ -0.81
USB1-208ENST00000563207 S100A6P06703 90 aa10□□□□□ -0.81
USB1-208ENST00000563207 CXCL5P42830 114 aa10□□□□□ -0.81
USB1-208ENST00000563207 HNRNPA3P51991 378 aaKnown RBP10□□□□□ -0.81
USB1-208ENST00000563207 CKS1BP61024 79 aa10□□□□□ -0.81
USB1-208ENST00000563207 TMEM170BQ5T4T1 132 aa10□□□□□ -0.81
USB1-208ENST00000563207 Q6ZRU5 148 aa10□□□□□ -0.81
USB1-208ENST00000563207 H0Y8G0 127 aa9.99□□□□□ -0.81
USB1-208ENST00000563207 SPINK8P0C7L1 97 aa9.99□□□□□ -0.81
USB1-208ENST00000563207 PLNP26678 52 aa9.99□□□□□ -0.81
USB1-208ENST00000563207 TOMM7Q9P0U1 55 aa9.99□□□□□ -0.81
USB1-208ENST00000563207 IGLV5-39A0A0G2JS06 123 aa9.98□□□□□ -0.81
USB1-208ENST00000563207 TRBV30A0A0K0K1B3 111 aa9.98□□□□□ -0.81
USB1-208ENST00000563207 SYS1-DBNDD2H3BUS1 97 aa9.98□□□□□ -0.81
USB1-208ENST00000563207 COX7B2Q8TF08 81 aa9.98□□□□□ -0.81
USB1-208ENST00000563207 DPM2O94777 84 aa9.97□□□□□ -0.81
USB1-208ENST00000563207 PET117Q6UWS5 81 aa9.97□□□□□ -0.81
USB1-208ENST00000563207 LINC00474Q9P2X8 69 aa9.97□□□□□ -0.81
USB1-208ENST00000563207 LOC107984640A0A0U1RRK4 108 aa9.96□□□□□ -0.82
USB1-208ENST00000563207 SFTA2Q6UW10 78 aa9.96□□□□□ -0.82
USB1-208ENST00000563207 UNQ6190/PRO20217Q6UXQ8 127 aa9.96□□□□□ -0.82
USB1-208ENST00000563207 TMEM223A0PJW6 202 aa9.95□□□□□ -0.82
USB1-208ENST00000563207 TLX1NBP0CAT3 122 aa9.95□□□□□ -0.82
USB1-208ENST00000563207 S100A2P29034 98 aa9.95□□□□□ -0.82
USB1-208ENST00000563207 CIRBPQ14011 172 aaKnown RBP9.95□□□□□ -0.82
USB1-208ENST00000563207 C2orf82Q6UX34 121 aa9.95□□□□□ -0.82
USB1-208ENST00000563207 HMCN2Q8NDA2 5059 aa9.94□□□□□ -0.82
USB1-208ENST00000563207 IGKCP01834 107 aa9.94□□□□□ -0.82
USB1-208ENST00000563207 RPL37AP61513 92 aaKnown RBP9.94□□□□□ -0.82
USB1-208ENST00000563207 C10orf25Q5T742 122 aa9.94□□□□□ -0.82
USB1-208ENST00000563207 HIST3H2BBQ8N257 126 aa9.94□□□□□ -0.82
USB1-208ENST00000563207 C6orf48Q9UBA6 75 aa9.94□□□□□ -0.82
USB1-208ENST00000563207 C3orf79P0CE67 100 aa9.93□□□□□ -0.82
USB1-208ENST00000563207 CHTF8P0CG12 524 aa9.93□□□□□ -0.82
USB1-208ENST00000563207 AKR1D1P51857 326 aa9.93□□□□□ -0.82
USB1-208ENST00000563207 LINC01545Q5VT33 79 aa9.93□□□□□ -0.82
USB1-208ENST00000563207 SPACA4Q8TDM5 124 aa9.92□□□□□ -0.82
USB1-208ENST00000563207 PTTG1IPP53801 180 aa9.91□□□□□ -0.82
USB1-208ENST00000563207 KRTDAPP60985 99 aa9.91□□□□□ -0.82
USB1-208ENST00000563207 HERVK_113P61574 105 aa9.91□□□□□ -0.82
USB1-208ENST00000563207 DPH3Q96FX2 82 aa9.91□□□□□ -0.82
USB1-208ENST00000563207 A0A096LNI7 61 aa9.9□□□□□ -0.82
USB1-208ENST00000563207 C20orf202A1L168 122 aa9.9□□□□□ -0.82
USB1-208ENST00000563207 C5orf52A6NGY3 159 aa9.9□□□□□ -0.82
USB1-208ENST00000563207 NDUFC2-KCTD14E9PQ53 114 aa9.9□□□□□ -0.82
USB1-208ENST00000563207 SNRPEP62304 92 aaKnown RBP9.9□□□□□ -0.82
USB1-208ENST00000563207 HIST1H2BLQ99880 126 aa9.9□□□□□ -0.82
USB1-208ENST00000563207 PMCHL2Q9BQD1 86 aa9.9□□□□□ -0.82
USB1-208ENST00000563207 IGKV2-24A0A0C4DH68 120 aa9.89□□□□□ -0.83
USB1-208ENST00000563207 RPL18AQ02543 176 aaKnown RBP9.89□□□□□ -0.83
USB1-208ENST00000563207 OXTP01178 125 aa9.88□□□□□ -0.83
USB1-208ENST00000563207 GAGE2BQ13066 116 aa9.88□□□□□ -0.83
USB1-208ENST00000563207 MAJINQ3KP22 176 aa9.88□□□□□ -0.83
USB1-208ENST00000563207 PLEKHB2Q96CS7 222 aa9.88□□□□□ -0.83
USB1-208ENST00000563207 LEPROTO15243 131 aa9.87□□□□□ -0.83
USB1-208ENST00000563207 COX17Q14061 63 aa9.87□□□□□ -0.83
USB1-208ENST00000563207 Q6ZRP5 223 aa9.87□□□□□ -0.83
USB1-208ENST00000563207 PLAC8Q9NZF1 115 aa9.87□□□□□ -0.83
USB1-208ENST00000563207 A0A087WYN8 130 aa9.86□□□□□ -0.83
USB1-208ENST00000563207 C9orf116Q5BN46 136 aaPredicted RBP9.86□□□□□ -0.83
USB1-208ENST00000563207 ZNF625Q96I27 306 aaPredicted RBP9.86□□□□□ -0.83
USB1-208ENST00000563207 UBR4Q5T4S7 5183 aa9.86□□□□□ -0.83
USB1-208ENST00000563207 HERV-K104P63124 156 aa9.85□□□□□ -0.83
USB1-208ENST00000563207 STPG4Q8N801 248 aa9.85□□□□□ -0.83
USB1-208ENST00000563207 LINC00587B1AMM8 73 aa9.84□□□□□ -0.83
USB1-208ENST00000563207 E9PLD3 99 aa9.84□□□□□ -0.83
USB1-208ENST00000563207 NMUP48645 174 aa9.84□□□□□ -0.83
USB1-208ENST00000563207 MYMXA0A1B0GTQ4 84 aa9.83□□□□□ -0.84
USB1-208ENST00000563207 J3QQQ9 107 aa9.83□□□□□ -0.84
USB1-208ENST00000563207 MT1HL1P0DM35 61 aa9.83□□□□□ -0.84
USB1-208ENST00000563207 GAGE2EQ4V326 116 aa9.83□□□□□ -0.84
USB1-208ENST00000563207 GAGE2DQ9UEU5 116 aa9.83□□□□□ -0.84
USB1-208ENST00000563207 NDUFA12Q9UI09 145 aa9.83□□□□□ -0.84
USB1-208ENST00000563207 ERG28Q9UKR5 140 aa9.82□□□□□ -0.84
USB1-208ENST00000563207 LGALS3P17931 250 aaKnown RBP9.81□□□□□ -0.84
USB1-208ENST00000563207 SERTAD4-AS1Q5TG53 156 aa9.81□□□□□ -0.84
USB1-208ENST00000563207 PFN2P35080 140 aa9.79□□□□□ -0.84
USB1-208ENST00000563207 A0A1W2PNN7 141 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms