RNA–Protein interactions for RNA: ENST00000562806.1

CHD9-207, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 400 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-207ENST00000562806 ARHGEF12Q9NZN5 1544 aa-0.47□□□□□ -2.48
CHD9-207ENST00000562806 CFAP54Q96N23 3096 aa-0.47□□□□□ -2.48
CHD9-207ENST00000562806 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.47□□□□□ -2.48
CHD9-207ENST00000562806 MT1BP07438 61 aa-0.47□□□□□ -2.48
CHD9-207ENST00000562806 TMEM170BQ5T4T1 132 aa-0.47□□□□□ -2.48
CHD9-207ENST00000562806 RERGLQ9H628 205 aa-0.47□□□□□ -2.48
CHD9-207ENST00000562806 FREM2Q5SZK8 3169 aa-0.47□□□□□ -2.49
CHD9-207ENST00000562806 MYO7BQ6PIF6 2116 aa-0.47□□□□□ -2.49
CHD9-207ENST00000562806 CPSF1Q10570 1443 aaKnown RBP-0.47□□□□□ -2.49
CHD9-207ENST00000562806 TLN1Q9Y490 2541 aaKnown RBP-0.47□□□□□ -2.49
CHD9-207ENST00000562806 BTAF1O14981 1849 aa-0.48□□□□□ -2.49
CHD9-207ENST00000562806 TULP4Q9NRJ4 1543 aa-0.48□□□□□ -2.49
CHD9-207ENST00000562806 RAPGEF6Q8TEU7 1601 aa-0.48□□□□□ -2.49
CHD9-207ENST00000562806 IGLC7A0M8Q6 106 aa-0.48□□□□□ -2.49
CHD9-207ENST00000562806 F8VRH5 84 aa-0.48□□□□□ -2.49
CHD9-207ENST00000562806 UQCR11O14957 56 aa-0.48□□□□□ -2.49
CHD9-207ENST00000562806 C12orf73Q69YU5 71 aa-0.48□□□□□ -2.49
CHD9-207ENST00000562806 BAGE2Q86Y30 109 aa-0.48□□□□□ -2.49
CHD9-207ENST00000562806 MT1MQ8N339 61 aa-0.48□□□□□ -2.49
CHD9-207ENST00000562806 DEFB123Q8N688 67 aa-0.48□□□□□ -2.49
CHD9-207ENST00000562806 COPS9Q8WXC6 57 aa-0.48□□□□□ -2.49
CHD9-207ENST00000562806 PFDN5Q99471 154 aa-0.48□□□□□ -2.49
CHD9-207ENST00000562806 SNRNP25Q9BV90 132 aaKnown RBP-0.48□□□□□ -2.49
CHD9-207ENST00000562806 PSME4Q14997 1843 aa-0.48□□□□□ -2.49
CHD9-207ENST00000562806 SCN7AQ01118 1682 aa-0.49□□□□□ -2.49
CHD9-207ENST00000562806 TRBV7-3A0A075B6L6 115 aa-0.49□□□□□ -2.49
CHD9-207ENST00000562806 LOC100130705A0A1B0GUX0 176 aa-0.49□□□□□ -2.49
CHD9-207ENST00000562806 HMGN4O00479 90 aa-0.49□□□□□ -2.49
CHD9-207ENST00000562806 GNG7O60262 68 aa-0.49□□□□□ -2.49
CHD9-207ENST00000562806 COX6B1P14854 86 aa-0.49□□□□□ -2.49
CHD9-207ENST00000562806 DEFA5Q01523 94 aa-0.49□□□□□ -2.49
CHD9-207ENST00000562806 KRTAP19-6Q3LI70 58 aa-0.49□□□□□ -2.49
CHD9-207ENST00000562806 KRTAP19-5Q3LI72 72 aa-0.49□□□□□ -2.49
CHD9-207ENST00000562806 MGST2Q99735 147 aa-0.49□□□□□ -2.49
CHD9-207ENST00000562806 LINC00470Q9BZP3 86 aa-0.49□□□□□ -2.49
CHD9-207ENST00000562806 LINC00474Q9P2X8 69 aa-0.49□□□□□ -2.49
CHD9-207ENST00000562806 LINC01558Q9Y6Z2 57 aa-0.49□□□□□ -2.49
CHD9-207ENST00000562806 TET3O43151 1660 aa-0.49□□□□□ -2.49
CHD9-207ENST00000562806 CENPEQ02224 2701 aa-0.5□□□□□ -2.49
CHD9-207ENST00000562806 DMDP11532 3685 aa-0.5□□□□□ -2.49
CHD9-207ENST00000562806 MIF4GDA9UHW6 222 aaKnown RBP-0.5□□□□□ -2.49
CHD9-207ENST00000562806 NDUFA2O43678 99 aa-0.5□□□□□ -2.49
CHD9-207ENST00000562806 MT2AP02795 61 aa-0.5□□□□□ -2.49
CHD9-207ENST00000562806 MT1EP04732 61 aa-0.5□□□□□ -2.49
CHD9-207ENST00000562806 MEIG1Q5JSS6 88 aa-0.5□□□□□ -2.49
CHD9-207ENST00000562806 DYNLRB1Q9NP97 96 aa-0.5□□□□□ -2.49
CHD9-207ENST00000562806 PAIP2BQ9ULR5 123 aaKnown RBP-0.5□□□□□ -2.49
CHD9-207ENST00000562806 GAPVD1Q14C86 1478 aa-0.5□□□□□ -2.49
CHD9-207ENST00000562806 CRYBG3Q68DQ2 2970 aa-0.5□□□□□ -2.49
CHD9-207ENST00000562806 KIAA0556O60303 1618 aa-0.5□□□□□ -2.49
CHD9-207ENST00000562806 CUL7Q14999 1698 aa-0.5□□□□□ -2.49
CHD9-207ENST00000562806 CSMD2Q7Z408 3487 aa-0.5□□□□□ -2.49
CHD9-207ENST00000562806 RANBP2P49792 3224 aaKnown RBP-0.51□□□□□ -2.49
CHD9-207ENST00000562806 LOC730098B7Z3J9 87 aa-0.51□□□□□ -2.49
CHD9-207ENST00000562806 TNFP01375 233 aa-0.51□□□□□ -2.49
CHD9-207ENST00000562806 APOC3P02656 99 aa-0.51□□□□□ -2.49
CHD9-207ENST00000562806 MYH7P12883 1935 aa-0.51□□□□□ -2.49
CHD9-207ENST00000562806 TPPP2P59282 170 aa-0.51□□□□□ -2.49
CHD9-207ENST00000562806 SPTAN1Q13813 2472 aaKnown RBP-0.51□□□□□ -2.49
CHD9-207ENST00000562806 MT1LQ93083 61 aa-0.51□□□□□ -2.49
CHD9-207ENST00000562806 ARL11Q969Q4 196 aa-0.51□□□□□ -2.49
CHD9-207ENST00000562806 SPANXDQ9BXN6 97 aa-0.51□□□□□ -2.49
CHD9-207ENST00000562806 NAA60Q9H7X0 242 aa-0.51□□□□□ -2.49
CHD9-207ENST00000562806 FRYLO94915 3013 aa-0.51□□□□□ -2.49
CHD9-207ENST00000562806 GOLGA4Q13439 2230 aaKnown RBP-0.52□□□□□ -2.49
CHD9-207ENST00000562806 HMGXB3Q12766 1538 aa-0.52□□□□□ -2.49
CHD9-207ENST00000562806 MAGI1Q96QZ7 1491 aaPredicted RBP-0.52□□□□□ -2.49
CHD9-207ENST00000562806 SMG6Q86US8 1419 aaKnown RBP-0.52□□□□□ -2.49
CHD9-207ENST00000562806 LINC00959A0A1B0GUT2 108 aa-0.52□□□□□ -2.49
CHD9-207ENST00000562806 FAM25AB3EWG3 89 aa-0.52□□□□□ -2.49
CHD9-207ENST00000562806 FAM25CB3EWG5 89 aa-0.52□□□□□ -2.49
CHD9-207ENST00000562806 FAM25GB3EWG6 89 aa-0.52□□□□□ -2.49
CHD9-207ENST00000562806 H0YAA0 97 aa-0.52□□□□□ -2.49
CHD9-207ENST00000562806 M0R2T5 61 aa-0.52□□□□□ -2.49
CHD9-207ENST00000562806 SFT2D2O95562 160 aa-0.52□□□□□ -2.49
CHD9-207ENST00000562806 MT1GP13640 62 aa-0.52□□□□□ -2.49
CHD9-207ENST00000562806 SELENOWP63302 87 aa-0.52□□□□□ -2.49
CHD9-207ENST00000562806 BTG2P78543 158 aa-0.52□□□□□ -2.49
CHD9-207ENST00000562806 CATR1Q13166 79 aa-0.52□□□□□ -2.49
CHD9-207ENST00000562806 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.52□□□□□ -2.49
CHD9-207ENST00000562806 PPP3R2Q96LZ3 170 aa-0.52□□□□□ -2.49
CHD9-207ENST00000562806 WDFY3Q8IZQ1 3526 aa-0.52□□□□□ -2.49
CHD9-207ENST00000562806 A2ML1A8K2U0 1454 aa-0.53□□□□□ -2.49
CHD9-207ENST00000562806 IQSEC2Q5JU85 1478 aa-0.53□□□□□ -2.49
CHD9-207ENST00000562806 SHANK2Q9UPX8 1470 aa-0.53□□□□□ -2.49
CHD9-207ENST00000562806 Q56UQ5 140 aa-0.53□□□□□ -2.49
CHD9-207ENST00000562806 C10orf113Q5VZT2 155 aa-0.53□□□□□ -2.49
CHD9-207ENST00000562806 COMMD6Q7Z4G1 85 aa-0.53□□□□□ -2.49
CHD9-207ENST00000562806 C5orf38Q86SI9 138 aa-0.53□□□□□ -2.49
CHD9-207ENST00000562806 MYOZ3Q8TDC0 251 aa-0.53□□□□□ -2.49
CHD9-207ENST00000562806 SPRR4Q96PI1 79 aa-0.53□□□□□ -2.49
CHD9-207ENST00000562806 CDC42SE2Q9NRR3 84 aa-0.53□□□□□ -2.49
CHD9-207ENST00000562806 MGAQ8IWI9 3026 aa-0.53□□□□□ -2.49
CHD9-207ENST00000562806 SPEGQ15772 3267 aa-0.53□□□□□ -2.49
CHD9-207ENST00000562806 EHBP1L1Q8N3D4 1523 aa-0.54□□□□□ -2.5
CHD9-207ENST00000562806 POLA1P09884 1462 aaPredicted RBP-0.54□□□□□ -2.5
CHD9-207ENST00000562806 LOC285095A0A1B0GVY8 99 aa-0.54□□□□□ -2.5
CHD9-207ENST00000562806 OOSP1A8MZH6 123 aa-0.54□□□□□ -2.5
CHD9-207ENST00000562806 CHKB-CPT1BH3BT56 60 aa-0.54□□□□□ -2.5
CHD9-207ENST00000562806 SPINK4O60575 86 aa-0.54□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms