RNA–Protein interactions for RNA: ENST00000562775.1

SPG7-206, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best)

Gene SPG7, Length 1,595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-206ENST00000562775 CEND1Q8N111 149 aa9.33□□□□□ -0.92
SPG7-206ENST00000562775 C3orf84H3BNL1 204 aa9.33□□□□□ -0.92
SPG7-206ENST00000562775 GCSHP23434 173 aa9.33□□□□□ -0.92
SPG7-206ENST00000562775 MEIG1Q5JSS6 88 aa9.33□□□□□ -0.92
SPG7-206ENST00000562775 C2orf82Q6UX34 121 aa9.33□□□□□ -0.92
SPG7-206ENST00000562775 TM2D2Q9BX73 214 aa9.33□□□□□ -0.92
SPG7-206ENST00000562775 TENM2Q9NT68 2774 aa9.32□□□□□ -0.92
SPG7-206ENST00000562775 Q6ZVH6 145 aa9.32□□□□□ -0.92
SPG7-206ENST00000562775 C15orf56Q8N910 161 aa9.32□□□□□ -0.92
SPG7-206ENST00000562775 STARD9Q9P2P6 4700 aa9.32□□□□□ -0.92
SPG7-206ENST00000562775 ZNF561-AS1K7EIQ3 104 aa9.31□□□□□ -0.92
SPG7-206ENST00000562775 ADAMTSL4-AS1Q5T5F5 129 aa9.31□□□□□ -0.92
SPG7-206ENST00000562775 NTN5Q8WTR8 489 aaPredicted RBP9.31□□□□□ -0.92
SPG7-206ENST00000562775 SPANXDQ9BXN6 97 aa9.31□□□□□ -0.92
SPG7-206ENST00000562775 SPANXCQ9NY87 97 aa9.31□□□□□ -0.92
SPG7-206ENST00000562775 LINC00526Q96FQ7 95 aa9.3□□□□□ -0.92
SPG7-206ENST00000562775 GVQW2A0A096LPI5 108 aaPredicted RBP9.29□□□□□ -0.92
SPG7-206ENST00000562775 SMIM13P0DJ93 91 aa9.29□□□□□ -0.92
SPG7-206ENST00000562775 FXYD2P54710 66 aa9.29□□□□□ -0.92
SPG7-206ENST00000562775 HIGD2BQ4VC39 106 aa9.29□□□□□ -0.92
SPG7-206ENST00000562775 C6orf223Q8N319 242 aa9.29□□□□□ -0.92
SPG7-206ENST00000562775 A0A0U1RRA0 63 aa9.29□□□□□ -0.92
SPG7-206ENST00000562775 PTTG1IPP53801 180 aa9.29□□□□□ -0.92
SPG7-206ENST00000562775 LBHQ53QV2 105 aaPredicted RBP9.29□□□□□ -0.92
SPG7-206ENST00000562775 C2orf48Q96LS8 159 aa9.29□□□□□ -0.92
SPG7-206ENST00000562775 ERG28Q9UKR5 140 aa9.29□□□□□ -0.92
SPG7-206ENST00000562775 UNQ6190/PRO20217Q6UXQ8 127 aa9.28□□□□□ -0.92
SPG7-206ENST00000562775 MUSTN1Q8IVN3 82 aa9.28□□□□□ -0.92
SPG7-206ENST00000562775 A6NDN8 102 aa9.27□□□□□ -0.93
SPG7-206ENST00000562775 USP17L23D6RBM5 183 aa9.27□□□□□ -0.93
SPG7-206ENST00000562775 F8WDY8 70 aa9.27□□□□□ -0.93
SPG7-206ENST00000562775 IFITM1P13164 125 aa9.27□□□□□ -0.93
SPG7-206ENST00000562775 LINC00158P58513 81 aa9.27□□□□□ -0.93
SPG7-206ENST00000562775 C10orf25Q5T742 122 aa9.27□□□□□ -0.93
SPG7-206ENST00000562775 DAND5Q8N907 189 aa9.27□□□□□ -0.93
SPG7-206ENST00000562775 VPS13DQ5THJ4 4388 aa9.27□□□□□ -0.93
SPG7-206ENST00000562775 TMEM238LA0A1B0GVL6 79 aa9.26□□□□□ -0.93
SPG7-206ENST00000562775 A6NJY4 79 aa9.26□□□□□ -0.93
SPG7-206ENST00000562775 PFN2P35080 140 aa9.26□□□□□ -0.93
SPG7-206ENST00000562775 COX17Q14061 63 aa9.26□□□□□ -0.93
SPG7-206ENST00000562775 COL5A1-AS1Q5SY13 56 aa9.26□□□□□ -0.93
SPG7-206ENST00000562775 CAMK2N2Q96S95 79 aa9.26□□□□□ -0.93
SPG7-206ENST00000562775 PSCAO43653 123 aa9.25□□□□□ -0.93
SPG7-206ENST00000562775 RPL24P83731 157 aaKnown RBP9.25□□□□□ -0.93
SPG7-206ENST00000562775 LINC00476Q8WZB0 136 aa9.25□□□□□ -0.93
SPG7-206ENST00000562775 DNAH1Q9P2D7 4330 aa9.25□□□□□ -0.93
SPG7-206ENST00000562775 TRBV30A0A0K0K1B3 111 aa9.24□□□□□ -0.93
SPG7-206ENST00000562775 M0R2N4 97 aa9.24□□□□□ -0.93
SPG7-206ENST00000562775 LY6G6CO95867 125 aa9.24□□□□□ -0.93
SPG7-206ENST00000562775 Q6ZR54 194 aa9.24□□□□□ -0.93
SPG7-206ENST00000562775 MIR7-3HGQ8N6C7 128 aa9.24□□□□□ -0.93
SPG7-206ENST00000562775 LINC00308Q8TCZ7 52 aa9.24□□□□□ -0.93
SPG7-206ENST00000562775 COPS9Q8WXC6 57 aa9.24□□□□□ -0.93
SPG7-206ENST00000562775 NPC2P61916 151 aa9.24□□□□□ -0.93
SPG7-206ENST00000562775 PPDPFQ9H3Y8 114 aa9.24□□□□□ -0.93
SPG7-206ENST00000562775 NHP2Q9NX24 153 aaKnown RBP9.24□□□□□ -0.93
SPG7-206ENST00000562775 C6orf48Q9UBA6 75 aa9.24□□□□□ -0.93
SPG7-206ENST00000562775 A4D1N5 150 aa9.23□□□□□ -0.93
SPG7-206ENST00000562775 SYCNQ0VAF6 134 aa9.23□□□□□ -0.93
SPG7-206ENST00000562775 C9orf116Q5BN46 136 aaPredicted RBP9.23□□□□□ -0.93
SPG7-206ENST00000562775 A0A1B0GWB2 263 aa9.22□□□□□ -0.93
SPG7-206ENST00000562775 SOSTDC1Q6X4U4 206 aa9.22□□□□□ -0.93
SPG7-206ENST00000562775 Q6ZRN7 208 aaPredicted RBP9.22□□□□□ -0.93
SPG7-206ENST00000562775 Q6ZRU5 148 aa9.22□□□□□ -0.93
SPG7-206ENST00000562775 LECT2O14960 151 aa9.21□□□□□ -0.93
SPG7-206ENST00000562775 EIF4EBP3O60516 100 aaPredicted RBP9.21□□□□□ -0.93
SPG7-206ENST00000562775 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.2□□□□□ -0.94
SPG7-206ENST00000562775 LYSTQ99698 3801 aa9.2□□□□□ -0.94
SPG7-206ENST00000562775 WFDC2Q14508 124 aa9.2□□□□□ -0.94
SPG7-206ENST00000562775 C14orf177Q52M58 125 aa9.2□□□□□ -0.94
SPG7-206ENST00000562775 LOC107984156A0A0G2JMH3 177 aa9.19□□□□□ -0.94
SPG7-206ENST00000562775 SLPIP03973 132 aa9.19□□□□□ -0.94
SPG7-206ENST00000562775 CFC1BP0CG36 223 aa9.19□□□□□ -0.94
SPG7-206ENST00000562775 CFC1P0CG37 223 aa9.19□□□□□ -0.94
SPG7-206ENST00000562775 RNF151Q2KHN1 245 aa9.19□□□□□ -0.94
SPG7-206ENST00000562775 ARL17AQ8IVW1 177 aa9.19□□□□□ -0.94
SPG7-206ENST00000562775 CARD19Q96LW7 228 aa9.19□□□□□ -0.94
SPG7-206ENST00000562775 K7ERJ3 54 aa9.18□□□□□ -0.94
SPG7-206ENST00000562775 TAX1BP3O14907 124 aa9.18□□□□□ -0.94
SPG7-206ENST00000562775 A0A0B4J2C4 111 aa9.17□□□□□ -0.94
SPG7-206ENST00000562775 LRCOL1A6NCL2 159 aa9.17□□□□□ -0.94
SPG7-206ENST00000562775 SND1-IT1Q9HBX3 110 aa9.17□□□□□ -0.94
SPG7-206ENST00000562775 RAB37Q96AX2 223 aa9.16□□□□□ -0.94
SPG7-206ENST00000562775 NDUFC2-KCTD14E9PQ53 114 aa9.16□□□□□ -0.94
SPG7-206ENST00000562775 C1orf134Q5TEV5 83 aa9.16□□□□□ -0.94
SPG7-206ENST00000562775 PRO1854Q9UHT4 67 aa9.15□□□□□ -0.95
SPG7-206ENST00000562775 TLX1NBP0CAT3 122 aa9.14□□□□□ -0.95
SPG7-206ENST00000562775 CNBPP62633 177 aaKnown RBP9.14□□□□□ -0.95
SPG7-206ENST00000562775 C9orf118A6NHY6 69 aa9.12□□□□□ -0.95
SPG7-206ENST00000562775 ALMS1Q8TCU4 4167 aa9.12□□□□□ -0.95
SPG7-206ENST00000562775 NDUFC2O95298 119 aa9.12□□□□□ -0.95
SPG7-206ENST00000562775 Q6ZRP5 223 aa9.12□□□□□ -0.95
SPG7-206ENST00000562775 PGPEP1Q9NXJ5 209 aa9.12□□□□□ -0.95
SPG7-206ENST00000562775 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.11□□□□□ -0.95
SPG7-206ENST00000562775 A0A087WTM6 91 aa9.11□□□□□ -0.95
SPG7-206ENST00000562775 LCE2DQ5TA82 110 aaPredicted RBP9.11□□□□□ -0.95
SPG7-206ENST00000562775 XAGE1AQ9HD64 81 aa9.11□□□□□ -0.95
SPG7-206ENST00000562775 IGKV2-28A0A075B6P5 120 aa9.1□□□□□ -0.95
SPG7-206ENST00000562775 A0A1B0GV90 55 aa9.1□□□□□ -0.95
SPG7-206ENST00000562775 H3BUT2 72 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms