RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 FHL2Q14192 279 aa5.41□□□□□ -1.54
TCF4-216ENST00000562680 CHKB-CPT1BH3BT56 60 aa5.41□□□□□ -1.54
TCF4-216ENST00000562680 SNURFQ9Y675 71 aa5.41□□□□□ -1.54
TCF4-216ENST00000562680 IBA57-AS1B1ANH7 110 aa5.4□□□□□ -1.54
TCF4-216ENST00000562680 C2orf48Q96LS8 159 aa5.4□□□□□ -1.54
TCF4-216ENST00000562680 NUPR2A6NF83 97 aa5.4□□□□□ -1.55
TCF4-216ENST00000562680 MAPKAPK5-AS1Q8N8E1 139 aa5.4□□□□□ -1.55
TCF4-216ENST00000562680 A0A0J9YWU9 116 aa5.39□□□□□ -1.55
TCF4-216ENST00000562680 A6NED7 52 aa5.39□□□□□ -1.55
TCF4-216ENST00000562680 SMCPP49901 116 aaPredicted RBP5.39□□□□□ -1.55
TCF4-216ENST00000562680 POM121L12Q8N7R1 296 aa5.39□□□□□ -1.55
TCF4-216ENST00000562680 CDC42SE2Q9NRR3 84 aa5.39□□□□□ -1.55
TCF4-216ENST00000562680 JMJD7-PLA2G4BH0Y9G9 81 aa5.39□□□□□ -1.55
TCF4-216ENST00000562680 URB1-AS1Q96HZ7 61 aa5.39□□□□□ -1.55
TCF4-216ENST00000562680 IGLV2-18A0A075B6J9 118 aa5.39□□□□□ -1.55
TCF4-216ENST00000562680 FLNAP21333 2647 aaKnown RBP5.38□□□□□ -1.55
TCF4-216ENST00000562680 UBE2D1P51668 147 aa5.38□□□□□ -1.55
TCF4-216ENST00000562680 GAS8-AS1O95177 125 aa5.38□□□□□ -1.55
TCF4-216ENST00000562680 PRM2P04554 102 aa5.38□□□□□ -1.55
TCF4-216ENST00000562680 SBSPONQ8IVN8 264 aa5.38□□□□□ -1.55
TCF4-216ENST00000562680 TNRC18O15417 2968 aaPredicted RBP5.38□□□□□ -1.55
TCF4-216ENST00000562680 MIR7-3HGQ8N6C7 128 aa5.38□□□□□ -1.55
TCF4-216ENST00000562680 LINC00959A0A1B0GUT2 108 aa5.38□□□□□ -1.55
TCF4-216ENST00000562680 TRIAP1O43715 76 aa5.38□□□□□ -1.55
TCF4-216ENST00000562680 LOC100131303A0A0U1RQF7 123 aa5.37□□□□□ -1.55
TCF4-216ENST00000562680 A0A1B0GUV1 79 aa5.37□□□□□ -1.55
TCF4-216ENST00000562680 ESRGQ1W209 222 aa5.37□□□□□ -1.55
TCF4-216ENST00000562680 LINC01546A6NGU7 62 aa5.37□□□□□ -1.55
TCF4-216ENST00000562680 KTN1-AS1Q86SY8 53 aa5.37□□□□□ -1.55
TCF4-216ENST00000562680 ENHOQ6UWT2 76 aa5.37□□□□□ -1.55
TCF4-216ENST00000562680 H3BNG1 76 aa5.37□□□□□ -1.55
TCF4-216ENST00000562680 CFAP46Q8IYW2 2715 aa5.37□□□□□ -1.55
TCF4-216ENST00000562680 NANOS2P60321 138 aaKnown RBP5.37□□□□□ -1.55
TCF4-216ENST00000562680 LST1O00453 97 aa5.36□□□□□ -1.55
TCF4-216ENST00000562680 AMELXQ99217 191 aa5.36□□□□□ -1.55
TCF4-216ENST00000562680 AKAP13Q12802 2813 aa5.36□□□□□ -1.55
TCF4-216ENST00000562680 LINC00315P59091 139 aa5.36□□□□□ -1.55
TCF4-216ENST00000562680 C14orf132Q9NPU4 83 aa5.36□□□□□ -1.55
TCF4-216ENST00000562680 PRUNE2Q8WUY3 3088 aa5.36□□□□□ -1.55
TCF4-216ENST00000562680 PRR15Q8IV56 129 aa5.36□□□□□ -1.55
TCF4-216ENST00000562680 Q9UF83 564 aa5.36□□□□□ -1.55
TCF4-216ENST00000562680 ITPR3Q14573 2671 aa5.36□□□□□ -1.55
TCF4-216ENST00000562680 ETDCA0A1B0GVM5 59 aa5.35□□□□□ -1.55
TCF4-216ENST00000562680 Q8IZM0 81 aa5.35□□□□□ -1.55
TCF4-216ENST00000562680 IGSF10Q6WRI0 2623 aa5.35□□□□□ -1.55
TCF4-216ENST00000562680 SYCNQ0VAF6 134 aa5.34□□□□□ -1.55
TCF4-216ENST00000562680 Q6ZTC4 211 aa5.34□□□□□ -1.55
TCF4-216ENST00000562680 DEFB105AQ8NG35 78 aa5.34□□□□□ -1.55
TCF4-216ENST00000562680 X6R8D5 127 aa5.34□□□□□ -1.55
TCF4-216ENST00000562680 CCKP06307 115 aa5.34□□□□□ -1.55
TCF4-216ENST00000562680 COX17Q14061 63 aa5.34□□□□□ -1.55
TCF4-216ENST00000562680 LINC00242Q5T6M2 205 aa5.34□□□□□ -1.55
TCF4-216ENST00000562680 A0A096LNJ9 63 aa5.34□□□□□ -1.55
TCF4-216ENST00000562680 PSPHP1O15172 72 aa5.34□□□□□ -1.56
TCF4-216ENST00000562680 TRIOO75962 3097 aa5.33□□□□□ -1.56
TCF4-216ENST00000562680 MGAQ8IWI9 3026 aa5.33□□□□□ -1.56
TCF4-216ENST00000562680 DIRC1Q969H9 104 aa5.33□□□□□ -1.56
TCF4-216ENST00000562680 A0A087WZ39 114 aa5.33□□□□□ -1.56
TCF4-216ENST00000562680 PRB2P02812 416 aaPredicted RBP5.33□□□□□ -1.56
TCF4-216ENST00000562680 Q5XG85 94 aa5.33□□□□□ -1.56
TCF4-216ENST00000562680 IGLV4-69A0A075B6H9 119 aa5.32□□□□□ -1.56
TCF4-216ENST00000562680 LINC00308Q8TCZ7 52 aa5.32□□□□□ -1.56
TCF4-216ENST00000562680 BCE1O60756 84 aa5.32□□□□□ -1.56
TCF4-216ENST00000562680 MP68P56378 58 aa5.32□□□□□ -1.56
TCF4-216ENST00000562680 HIGD2BQ4VC39 106 aa5.32□□□□□ -1.56
TCF4-216ENST00000562680 Q6ZSN1 163 aa5.32□□□□□ -1.56
TCF4-216ENST00000562680 MDFIQ99750 246 aa5.32□□□□□ -1.56
TCF4-216ENST00000562680 ZNF73O43830 326 aaPredicted RBP5.32□□□□□ -1.56
TCF4-216ENST00000562680 MUC4Q99102 2169 aa5.32□□□□□ -1.56
TCF4-216ENST00000562680 LECT2O14960 151 aa5.32□□□□□ -1.56
TCF4-216ENST00000562680 A0A087WVE0 104 aa5.31□□□□□ -1.56
TCF4-216ENST00000562680 NCR3O14931 201 aa5.31□□□□□ -1.56
TCF4-216ENST00000562680 CASC2Q6XLA1 102 aa5.31□□□□□ -1.56
TCF4-216ENST00000562680 LCA10Q71F78 164 aa5.31□□□□□ -1.56
TCF4-216ENST00000562680 LAMA2P24043 3122 aaKnown RBP5.31□□□□□ -1.56
TCF4-216ENST00000562680 LYPD5Q6UWN5 251 aa5.31□□□□□ -1.56
TCF4-216ENST00000562680 SMIM1B2RUZ4 78 aa5.3□□□□□ -1.56
TCF4-216ENST00000562680 RBM12B-AS1Q9P1G2 102 aa5.3□□□□□ -1.56
TCF4-216ENST00000562680 Q8NAQ8 132 aa5.3□□□□□ -1.56
TCF4-216ENST00000562680 CR1P17927 2039 aa5.3□□□□□ -1.56
TCF4-216ENST00000562680 PDE6GP18545 87 aa5.3□□□□□ -1.56
TCF4-216ENST00000562680 EGFEM1PQ0D2K5 195 aa5.3□□□□□ -1.56
TCF4-216ENST00000562680 C19orf73Q9NVV2 129 aa5.3□□□□□ -1.56
TCF4-216ENST00000562680 CENPEQ02224 2701 aa5.3□□□□□ -1.56
TCF4-216ENST00000562680 NREPQ16612 68 aa5.3□□□□□ -1.56
TCF4-216ENST00000562680 Q6ZVQ6 151 aa5.29□□□□□ -1.56
TCF4-216ENST00000562680 PRR15LQ9BU68 103 aa5.29□□□□□ -1.56
TCF4-216ENST00000562680 PRYO14603 147 aa5.29□□□□□ -1.56
TCF4-216ENST00000562680 IGLV4-60A0A075B6I1 120 aa5.29□□□□□ -1.56
TCF4-216ENST00000562680 CSNK1G2-AS1Q8NCQ2 148 aa5.29□□□□□ -1.56
TCF4-216ENST00000562680 UNC79Q9P2D8 2635 aa5.29□□□□□ -1.56
TCF4-216ENST00000562680 COX7BP24311 80 aa5.28□□□□□ -1.56
TCF4-216ENST00000562680 LINC01556Q5JQF7 62 aa5.28□□□□□ -1.56
TCF4-216ENST00000562680 FAM19A1Q7Z5A9 133 aa5.28□□□□□ -1.56
TCF4-216ENST00000562680 CELA1Q9UNI1 258 aa5.28□□□□□ -1.56
TCF4-216ENST00000562680 FAM19A3Q7Z5A8 133 aa5.28□□□□□ -1.56
TCF4-216ENST00000562680 LINC00474Q9P2X8 69 aa5.28□□□□□ -1.56
TCF4-216ENST00000562680 DSPP15924 2871 aaKnown RBP5.28□□□□□ -1.56
TCF4-216ENST00000562680 NDUFB1O75438 58 aa5.28□□□□□ -1.56
TCF4-216ENST00000562680 KRTAP10-3P60369 221 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms