RNA–Protein interactions for RNA: ENST00000562404.1

LPCAT4-202, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 3

Gene LPCAT4, Length 577 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-202ENST00000562404 COX19Q49B96 90 aa6.8□□□□□ -1.32
LPCAT4-202ENST00000562404 SPINK6Q6UWN8 80 aa6.8□□□□□ -1.32
LPCAT4-202ENST00000562404 LINC01600Q96MT4 127 aa6.8□□□□□ -1.32
LPCAT4-202ENST00000562404 SMIM1B2RUZ4 78 aa6.79□□□□□ -1.32
LPCAT4-202ENST00000562404 NDUFC2-KCTD14E9PQ53 114 aa6.79□□□□□ -1.32
LPCAT4-202ENST00000562404 PAPPA-AS1Q5QFB9 102 aa6.79□□□□□ -1.32
LPCAT4-202ENST00000562404 Q8IZM0 81 aa6.79□□□□□ -1.32
LPCAT4-202ENST00000562404 C18orf32Q8TCD1 76 aa6.79□□□□□ -1.32
LPCAT4-202ENST00000562404 IGLV5-45A0A087WSX0 123 aa6.78□□□□□ -1.32
LPCAT4-202ENST00000562404 G0S2P27469 103 aa6.78□□□□□ -1.32
LPCAT4-202ENST00000562404 C6orf226Q5I0X4 101 aa6.78□□□□□ -1.32
LPCAT4-202ENST00000562404 C1orf137Q5JT78 98 aa6.78□□□□□ -1.32
LPCAT4-202ENST00000562404 FA2HQ7L5A8 372 aa6.78□□□□□ -1.32
LPCAT4-202ENST00000562404 LINC00469Q8N7U9 141 aa6.78□□□□□ -1.32
LPCAT4-202ENST00000562404 PACRGQ96M98 296 aaPredicted RBP6.78□□□□□ -1.32
LPCAT4-202ENST00000562404 YPEL4Q96NS1 127 aa6.78□□□□□ -1.32
LPCAT4-202ENST00000562404 CST9LQ9H4G1 147 aa6.78□□□□□ -1.32
LPCAT4-202ENST00000562404 GEMIN7Q9H840 131 aaKnown RBP6.78□□□□□ -1.32
LPCAT4-202ENST00000562404 TRAPPC1Q9Y5R8 145 aa6.78□□□□□ -1.32
LPCAT4-202ENST00000562404 TINCRA0A1B0GVN0 87 aa6.77□□□□□ -1.33
LPCAT4-202ENST00000562404 PRSS2P07478 247 aa6.77□□□□□ -1.33
LPCAT4-202ENST00000562404 KRTAP10-8P60410 259 aa6.77□□□□□ -1.33
LPCAT4-202ENST00000562404 SEC11AP67812 179 aa6.77□□□□□ -1.33
LPCAT4-202ENST00000562404 PMCHL1Q16048 86 aa6.77□□□□□ -1.33
LPCAT4-202ENST00000562404 M0QXV9 152 aa6.76□□□□□ -1.33
LPCAT4-202ENST00000562404 SPINK8P0C7L1 97 aa6.76□□□□□ -1.33
LPCAT4-202ENST00000562404 CKS1BP61024 79 aa6.76□□□□□ -1.33
LPCAT4-202ENST00000562404 PMVKQ15126 192 aa6.76□□□□□ -1.33
LPCAT4-202ENST00000562404 XAGE1AQ9HD64 81 aa6.76□□□□□ -1.33
LPCAT4-202ENST00000562404 SMCO4Q9NRQ5 59 aa6.76□□□□□ -1.33
LPCAT4-202ENST00000562404 PLA2G2DQ9UNK4 145 aa6.76□□□□□ -1.33
LPCAT4-202ENST00000562404 SNAPINO95295 136 aa6.75□□□□□ -1.33
LPCAT4-202ENST00000562404 IGLV7-43P04211 117 aa6.75□□□□□ -1.33
LPCAT4-202ENST00000562404 SVBPQ8N300 66 aa6.75□□□□□ -1.33
LPCAT4-202ENST00000562404 LINC01549A6NIU2 74 aa6.74□□□□□ -1.33
LPCAT4-202ENST00000562404 F8VRH5 84 aa6.74□□□□□ -1.33
LPCAT4-202ENST00000562404 LINC00614P0C842 121 aa6.74□□□□□ -1.33
LPCAT4-202ENST00000562404 PDZD11Q5EBL8 140 aa6.74□□□□□ -1.33
LPCAT4-202ENST00000562404 COX7B2Q8TF08 81 aa6.74□□□□□ -1.33
LPCAT4-202ENST00000562404 IGLC3P0DOY3 106 aa6.73□□□□□ -1.33
LPCAT4-202ENST00000562404 REG3GQ6UW15 175 aa6.73□□□□□ -1.33
LPCAT4-202ENST00000562404 LRP2P98164 4655 aa6.73□□□□□ -1.33
LPCAT4-202ENST00000562404 HBDP02042 147 aa6.72□□□□□ -1.33
LPCAT4-202ENST00000562404 ZNF22P17026 224 aaPredicted RBP6.72□□□□□ -1.33
LPCAT4-202ENST00000562404 C22orf24Q9Y442 160 aa6.72□□□□□ -1.33
LPCAT4-202ENST00000562404 IGLV5-39A0A0G2JS06 123 aa6.71□□□□□ -1.34
LPCAT4-202ENST00000562404 CXCL5P42830 114 aa6.71□□□□□ -1.34
LPCAT4-202ENST00000562404 NDUFA6P56556 154 aa6.71□□□□□ -1.34
LPCAT4-202ENST00000562404 UBE2BP63146 152 aa6.71□□□□□ -1.34
LPCAT4-202ENST00000562404 NDUFA5Q16718 116 aa6.71□□□□□ -1.34
LPCAT4-202ENST00000562404 CBLN2Q8IUK8 224 aa6.71□□□□□ -1.34
LPCAT4-202ENST00000562404 C11orf86A6NJI1 115 aa6.7□□□□□ -1.34
LPCAT4-202ENST00000562404 RAB5BP61020 215 aa6.7□□□□□ -1.34
LPCAT4-202ENST00000562404 H0Y9J4 135 aa6.69□□□□□ -1.34
LPCAT4-202ENST00000562404 KRTAP1-4P0C5Y4 121 aa6.69□□□□□ -1.34
LPCAT4-202ENST00000562404 BAGE3Q86Y29 109 aa6.68□□□□□ -1.34
LPCAT4-202ENST00000562404 SLC7A5P1Q8MH63 180 aa6.68□□□□□ -1.34
LPCAT4-202ENST00000562404 PRR26Q8N8Z3 221 aa6.68□□□□□ -1.34
LPCAT4-202ENST00000562404 LPAP08519 4548 aa6.67□□□□□ -1.34
LPCAT4-202ENST00000562404 H3BRM9 83 aa6.67□□□□□ -1.34
LPCAT4-202ENST00000562404 SCO1O75880 301 aa6.67□□□□□ -1.34
LPCAT4-202ENST00000562404 MRPL55Q7Z7F7 128 aaKnown RBP6.67□□□□□ -1.34
LPCAT4-202ENST00000562404 DIRC1Q969H9 104 aa6.67□□□□□ -1.34
LPCAT4-202ENST00000562404 LINC00167Q96N53 147 aa6.67□□□□□ -1.34
LPCAT4-202ENST00000562404 RPL37AP8A6NKH3 93 aa6.66□□□□□ -1.34
LPCAT4-202ENST00000562404 ATP5LO75964 103 aa6.66□□□□□ -1.34
LPCAT4-202ENST00000562404 PFN2P35080 140 aa6.66□□□□□ -1.34
LPCAT4-202ENST00000562404 LINC00310P59036 64 aa6.66□□□□□ -1.34
LPCAT4-202ENST00000562404 Q8NDZ9 215 aa6.66□□□□□ -1.34
LPCAT4-202ENST00000562404 TP73-AS1Q9UF72 201 aa6.66□□□□□ -1.34
LPCAT4-202ENST00000562404 GAGE10A6NGK3 116 aa6.65□□□□□ -1.34
LPCAT4-202ENST00000562404 TRGC2P03986 189 aa6.65□□□□□ -1.34
LPCAT4-202ENST00000562404 TMEM170BQ5T4T1 132 aa6.65□□□□□ -1.34
LPCAT4-202ENST00000562404 FAM19A2Q8N3H0 131 aa6.65□□□□□ -1.34
LPCAT4-202ENST00000562404 ZNF625Q96I27 306 aaPredicted RBP6.65□□□□□ -1.34
LPCAT4-202ENST00000562404 CHTOPQ9Y3Y2 248 aaKnown RBP6.65□□□□□ -1.34
LPCAT4-202ENST00000562404 IGLV5-37A0A075B6J1 123 aa6.64□□□□□ -1.35
LPCAT4-202ENST00000562404 ZNF861PO60384 105 aa6.64□□□□□ -1.35
LPCAT4-202ENST00000562404 LBHQ53QV2 105 aaPredicted RBP6.64□□□□□ -1.35
LPCAT4-202ENST00000562404 IFI27L1Q96BM0 104 aa6.64□□□□□ -1.35
LPCAT4-202ENST00000562404 CHCHD1Q96BP2 118 aaKnown RBP6.64□□□□□ -1.35
LPCAT4-202ENST00000562404 ERG28Q9UKR5 140 aa6.63□□□□□ -1.35
LPCAT4-202ENST00000562404 RNF213Q63HN8 5207 aa6.63□□□□□ -1.35
LPCAT4-202ENST00000562404 TRAV12-1A0A0B4J245 112 aa6.62□□□□□ -1.35
LPCAT4-202ENST00000562404 TMEM223A0PJW6 202 aa6.62□□□□□ -1.35
LPCAT4-202ENST00000562404 NUPR1O60356 82 aa6.62□□□□□ -1.35
LPCAT4-202ENST00000562404 VPREB1P12018 145 aa6.62□□□□□ -1.35
LPCAT4-202ENST00000562404 SND1-IT1Q9HBX3 110 aa6.62□□□□□ -1.35
LPCAT4-202ENST00000562404 COLCA2A8K830 154 aa6.61□□□□□ -1.35
LPCAT4-202ENST00000562404 BCE1O60756 84 aa6.61□□□□□ -1.35
LPCAT4-202ENST00000562404 IGKV2-28A0A075B6P5 120 aa6.6□□□□□ -1.35
LPCAT4-202ENST00000562404 HSBP1O75506 76 aa6.6□□□□□ -1.35
LPCAT4-202ENST00000562404 SERF1AO75920 110 aa6.6□□□□□ -1.35
LPCAT4-202ENST00000562404 IGKV2D-28P01615 120 aa6.6□□□□□ -1.35
LPCAT4-202ENST00000562404 KRTAP13-1Q8IUC0 172 aa6.6□□□□□ -1.35
LPCAT4-202ENST00000562404 IGLV1-50A0A075B6I6 118 aa6.59□□□□□ -1.35
LPCAT4-202ENST00000562404 A0A0U1RRA0 63 aa6.59□□□□□ -1.35
LPCAT4-202ENST00000562404 NKAPP1Q8N9T2 125 aa6.59□□□□□ -1.35
LPCAT4-202ENST00000562404 A0A087X002 238 aa6.58□□□□□ -1.36
LPCAT4-202ENST00000562404 H0Y8G0 127 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 281.3 ms