RNA–Protein interactions for RNA: ENST00000561610.1

PPP4C-202, Transcript of protein phosphatase 4 catalytic subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP4C, Length 1,333 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4C-202ENST00000561610 ATP5LO75964 103 aa12.09□□□□□ -0.47
PPP4C-202ENST00000561610 BATFQ16520 125 aa12.09□□□□□ -0.47
PPP4C-202ENST00000561610 C9orf163Q8N9P6 203 aa12.09□□□□□ -0.47
PPP4C-202ENST00000561610 IGHV3-64A0A075B6Q5 118 aa12.08□□□□□ -0.48
PPP4C-202ENST00000561610 SLPIP03973 132 aa12.08□□□□□ -0.48
PPP4C-202ENST00000561610 HERVK_113P63121 156 aa12.08□□□□□ -0.48
PPP4C-202ENST00000561610 CAMK2N2Q96S95 79 aa12.08□□□□□ -0.48
PPP4C-202ENST00000561610 CST9LQ9H4G1 147 aa12.08□□□□□ -0.48
PPP4C-202ENST00000561610 CARD19Q96LW7 228 aa12.07□□□□□ -0.48
PPP4C-202ENST00000561610 FAM30AQ9NZY2 134 aa12.07□□□□□ -0.48
PPP4C-202ENST00000561610 A0A087WZ39 114 aa12.06□□□□□ -0.48
PPP4C-202ENST00000561610 SYCNQ0VAF6 134 aa12.06□□□□□ -0.48
PPP4C-202ENST00000561610 APOBP04114 4563 aaKnown RBP12.05□□□□□ -0.48
PPP4C-202ENST00000561610 LINC01545Q5VT33 79 aa12.05□□□□□ -0.48
PPP4C-202ENST00000561610 SLC25A34Q6PIV7 304 aa12.05□□□□□ -0.48
PPP4C-202ENST00000561610 DPH3Q96FX2 82 aa12.05□□□□□ -0.48
PPP4C-202ENST00000561610 TOMM7Q9P0U1 55 aa12.05□□□□□ -0.48
PPP4C-202ENST00000561610 CDKN2A-AS1Q9UH64 79 aa12.04□□□□□ -0.48
PPP4C-202ENST00000561610 DMBT1Q9UGM3 2413 aaPredicted RBP12.03□□□□□ -0.48
PPP4C-202ENST00000561610 TINCRA0A1B0GVN0 87 aa12.03□□□□□ -0.48
PPP4C-202ENST00000561610 PRSS2P07478 247 aa12.03□□□□□ -0.48
PPP4C-202ENST00000561610 FAM19A3Q7Z5A8 133 aa12.03□□□□□ -0.48
PPP4C-202ENST00000561610 IFI27L1Q96BM0 104 aa12.03□□□□□ -0.48
PPP4C-202ENST00000561610 H0Y8G0 127 aa12.02□□□□□ -0.49
PPP4C-202ENST00000561610 Q6ZRU5 148 aa12.02□□□□□ -0.49
PPP4C-202ENST00000561610 ATOH7Q8N100 152 aa12.02□□□□□ -0.49
PPP4C-202ENST00000561610 XGP55808 180 aa12.01□□□□□ -0.49
PPP4C-202ENST00000561610 C2orf48Q96LS8 159 aa12.01□□□□□ -0.49
PPP4C-202ENST00000561610 CHAC1Q9BUX1 264 aa12.01□□□□□ -0.49
PPP4C-202ENST00000561610 IGKV2-24A0A0C4DH68 120 aa12□□□□□ -0.49
PPP4C-202ENST00000561610 NDUFA1O15239 70 aa12□□□□□ -0.49
PPP4C-202ENST00000561610 SDIM1Q6ZPB5 146 aa12□□□□□ -0.49
PPP4C-202ENST00000561610 LINC01561Q8N1V8 128 aa12□□□□□ -0.49
PPP4C-202ENST00000561610 H3BRM9 83 aa11.99□□□□□ -0.49
PPP4C-202ENST00000561610 SMR3BP02814 79 aaPredicted RBP11.99□□□□□ -0.49
PPP4C-202ENST00000561610 STPG4Q8N801 248 aa11.99□□□□□ -0.49
PPP4C-202ENST00000561610 PKIGQ9Y2B9 76 aa11.99□□□□□ -0.49
PPP4C-202ENST00000561610 CHTOPQ9Y3Y2 248 aaKnown RBP11.99□□□□□ -0.49
PPP4C-202ENST00000561610 UBR4Q5T4S7 5183 aa11.98□□□□□ -0.49
PPP4C-202ENST00000561610 SPINK8P0C7L1 97 aa11.98□□□□□ -0.49
PPP4C-202ENST00000561610 C6orf226Q5I0X4 101 aa11.98□□□□□ -0.49
PPP4C-202ENST00000561610 CHTF8P0CG12 524 aa11.97□□□□□ -0.49
PPP4C-202ENST00000561610 HINT1P49773 126 aaPredicted RBP11.97□□□□□ -0.49
PPP4C-202ENST00000561610 CKS1BP61024 79 aa11.97□□□□□ -0.49
PPP4C-202ENST00000561610 Q6ZSA8 131 aa11.97□□□□□ -0.49
PPP4C-202ENST00000561610 SCXQ7RTU7 201 aa11.97□□□□□ -0.49
PPP4C-202ENST00000561610 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.97□□□□□ -0.49
PPP4C-202ENST00000561610 DNAH8Q96JB1 4490 aa11.97□□□□□ -0.49
PPP4C-202ENST00000561610 COX8AP10176 69 aa11.96□□□□□ -0.49
PPP4C-202ENST00000561610 RPL18AQ02543 176 aaKnown RBP11.96□□□□□ -0.49
PPP4C-202ENST00000561610 GAGE2BQ13066 116 aa11.96□□□□□ -0.49
PPP4C-202ENST00000561610 INAFM2P0DMQ5 153 aa11.95□□□□□ -0.5
PPP4C-202ENST00000561610 MAJINQ3KP22 176 aa11.95□□□□□ -0.5
PPP4C-202ENST00000561610 TMEM170BQ5T4T1 132 aa11.95□□□□□ -0.5
PPP4C-202ENST00000561610 C2orf82Q6UX34 121 aa11.95□□□□□ -0.5
PPP4C-202ENST00000561610 UNQ6190/PRO20217Q6UXQ8 127 aa11.95□□□□□ -0.5
PPP4C-202ENST00000561610 LOC107984640A0A0U1RRK4 108 aa11.94□□□□□ -0.5
PPP4C-202ENST00000561610 F8WDY8 70 aa11.94□□□□□ -0.5
PPP4C-202ENST00000561610 KIAA0087Q14695 138 aa11.94□□□□□ -0.5
PPP4C-202ENST00000561610 CIRBP-AS1Q8TBR5 109 aa11.94□□□□□ -0.5
PPP4C-202ENST00000561610 IGLV5-45A0A087WSX0 123 aa11.93□□□□□ -0.5
PPP4C-202ENST00000561610 A0A096LNI7 61 aa11.93□□□□□ -0.5
PPP4C-202ENST00000561610 SMIM1B2RUZ4 78 aa11.93□□□□□ -0.5
PPP4C-202ENST00000561610 EPM2AB3EWF7 344 aa11.93□□□□□ -0.5
PPP4C-202ENST00000561610 PANO1I0J062 215 aa11.93□□□□□ -0.5
PPP4C-202ENST00000561610 UBE2V1Q13404 147 aa11.93□□□□□ -0.5
PPP4C-202ENST00000561610 C10orf25Q5T742 122 aa11.93□□□□□ -0.5
PPP4C-202ENST00000561610 Q8IZM0 81 aa11.93□□□□□ -0.5
PPP4C-202ENST00000561610 CBY1Q9Y3M2 126 aa11.93□□□□□ -0.5
PPP4C-202ENST00000561610 TRAV12-1A0A0B4J245 112 aa11.92□□□□□ -0.5
PPP4C-202ENST00000561610 C11orf86A6NJI1 115 aa11.92□□□□□ -0.5
PPP4C-202ENST00000561610 ZNF22P17026 224 aaPredicted RBP11.92□□□□□ -0.5
PPP4C-202ENST00000561610 PTTG1IPP53801 180 aa11.92□□□□□ -0.5
PPP4C-202ENST00000561610 COX7B2Q8TF08 81 aa11.92□□□□□ -0.5
PPP4C-202ENST00000561610 MRPL35Q9NZE8 188 aaKnown RBP11.92□□□□□ -0.5
PPP4C-202ENST00000561610 BVES-AS1Q5T3Y7 98 aa11.91□□□□□ -0.5
PPP4C-202ENST00000561610 C6orf48Q9UBA6 75 aa11.91□□□□□ -0.5
PPP4C-202ENST00000561610 F8VRH5 84 aa11.9□□□□□ -0.5
PPP4C-202ENST00000561610 RNF151Q2KHN1 245 aa11.9□□□□□ -0.5
PPP4C-202ENST00000561610 A6NDN8 102 aa11.89□□□□□ -0.51
PPP4C-202ENST00000561610 FAM229AH3BQW9 127 aa11.89□□□□□ -0.51
PPP4C-202ENST00000561610 SPACA4Q8TDM5 124 aa11.89□□□□□ -0.51
PPP4C-202ENST00000561610 LINC00474Q9P2X8 69 aa11.89□□□□□ -0.51
PPP4C-202ENST00000561610 A0A087WYN8 130 aa11.88□□□□□ -0.51
PPP4C-202ENST00000561610 TRBV30A0A0K0K1B3 111 aa11.88□□□□□ -0.51
PPP4C-202ENST00000561610 CXCL5P42830 114 aa11.87□□□□□ -0.51
PPP4C-202ENST00000561610 HSD52Q0P140 79 aa11.87□□□□□ -0.51
PPP4C-202ENST00000561610 GAGE2EQ4V326 116 aa11.87□□□□□ -0.51
PPP4C-202ENST00000561610 C9orf116Q5BN46 136 aaPredicted RBP11.87□□□□□ -0.51
PPP4C-202ENST00000561610 LINC00528Q8N1L1 170 aa11.87□□□□□ -0.51
PPP4C-202ENST00000561610 GAGE2DQ9UEU5 116 aa11.87□□□□□ -0.51
PPP4C-202ENST00000561610 ODF1Q14990 250 aa11.86□□□□□ -0.51
PPP4C-202ENST00000561610 Q5VSD8 79 aa11.86□□□□□ -0.51
PPP4C-202ENST00000561610 VAMP3Q15836 100 aa11.86□□□□□ -0.51
PPP4C-202ENST00000561610 BOD1L2Q8IYS8 172 aa11.86□□□□□ -0.51
PPP4C-202ENST00000561610 CIRBPQ14011 172 aaKnown RBP11.85□□□□□ -0.51
PPP4C-202ENST00000561610 TAX1BP3O14907 124 aa11.83□□□□□ -0.52
PPP4C-202ENST00000561610 DPM2O94777 84 aa11.83□□□□□ -0.52
PPP4C-202ENST00000561610 HIGD1BQ9P298 99 aa11.83□□□□□ -0.52
PPP4C-202ENST00000561610 FAT1Q14517 4588 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms